RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W ELP2P42935 788 aa2.03□□□□□ -2.08
MSL1YIR009W RPA34P47006 233 aaPredicted RBP2.03□□□□□ -2.08
MSL1YIR009W ASN2P49090 572 aaKnown RBP2.03□□□□□ -2.08
MSL1YIR009W TOM22P49334 152 aa2.03□□□□□ -2.08
MSL1YIR009W MPS2P53159 387 aa2.03□□□□□ -2.08
MSL1YIR009W WSC2P53832 503 aa2.03□□□□□ -2.08
MSL1YIR009W UTP6Q02354 440 aaKnown RBP2.03□□□□□ -2.08
MSL1YIR009W YDR541CQ03049 344 aa2.03□□□□□ -2.08
MSL1YIR009W PRP3Q03338 469 aaPredicted RBP2.03□□□□□ -2.08
MSL1YIR009W BNA5Q05979 453 aa2.03□□□□□ -2.08
MSL1YIR009W RTC5Q12108 567 aaKnown RBP2.03□□□□□ -2.08
MSL1YIR009W YDL009CQ12210 107 aa2.03□□□□□ -2.08
MSL1YIR009W GLE1Q12315 538 aa2.03□□□□□ -2.08
MSL1YIR009W PFK27Q12471 397 aaPredicted RBP2.03□□□□□ -2.08
MSL1YIR009W IMA3P0CW40 589 aa2.02□□□□□ -2.09
MSL1YIR009W IMA4P0CW41 589 aa2.02□□□□□ -2.09
MSL1YIR009W YAR066WP0CX18 203 aa2.02□□□□□ -2.09
MSL1YIR009W YHR214WP0CX19 203 aa2.02□□□□□ -2.09
MSL1YIR009W RNA14P25298 677 aaKnown RBP2.02□□□□□ -2.09
MSL1YIR009W RAD57P25301 460 aa2.02□□□□□ -2.09
MSL1YIR009W SLM5P25345 492 aaKnown RBP2.02□□□□□ -2.09
MSL1YIR009W PUT3P25502 979 aaPredicted RBP2.02□□□□□ -2.09
MSL1YIR009W GEX1P25596 615 aa2.02□□□□□ -2.09
MSL1YIR009W HSP104P31539 908 aaKnown RBP2.02□□□□□ -2.09
MSL1YIR009W SMY1P32364 656 aaKnown RBP2.02□□□□□ -2.09
MSL1YIR009W PPQ1P32945 549 aa2.02□□□□□ -2.09
MSL1YIR009W SRB2P34162 210 aa2.02□□□□□ -2.09
MSL1YIR009W PCH2P38126 564 aa2.02□□□□□ -2.09
MSL1YIR009W SLX1P38324 304 aa2.02□□□□□ -2.09
MSL1YIR009W STP2P38704 541 aa2.02□□□□□ -2.09
MSL1YIR009W YHR177WP38867 453 aa2.02□□□□□ -2.09
MSL1YIR009W STN1P38960 494 aa2.02□□□□□ -2.09
MSL1YIR009W RTT105P40063 208 aa2.02□□□□□ -2.09
MSL1YIR009W SHO1P40073 367 aa2.02□□□□□ -2.09
MSL1YIR009W FAU1P40099 211 aa2.02□□□□□ -2.09
MSL1YIR009W GAT2P40209 560 aa2.02□□□□□ -2.09
MSL1YIR009W ALG8P40351 577 aa2.02□□□□□ -2.09
MSL1YIR009W SNL1P40548 159 aa2.02□□□□□ -2.09
MSL1YIR009W YFR018CP43599 363 aa2.02□□□□□ -2.09
MSL1YIR009W MRPL51Q06090 140 aaPredicted RBP2.02□□□□□ -2.09
MSL1YIR009W ECM7Q06200 448 aa2.02□□□□□ -2.09
MSL1YIR009W IPK1Q06667 281 aa2.02□□□□□ -2.09
MSL1YIR009W IMA2Q08295 589 aa2.02□□□□□ -2.09
MSL1YIR009W PEX27Q08580 376 aa2.02□□□□□ -2.09
MSL1YIR009W LSP1Q12230 341 aaKnown RBP2.02□□□□□ -2.09
MSL1YIR009W YPK9Q12697 1472 aa2.01□□□□□ -2.09
MSL1YIR009W HIS4P00815 799 aaKnown RBP2.01□□□□□ -2.09
MSL1YIR009W GAL7P08431 366 aa2.01□□□□□ -2.09
MSL1YIR009W EXO70P19658 623 aa2.01□□□□□ -2.09
MSL1YIR009W SAG1P20840 650 aa2.01□□□□□ -2.09
MSL1YIR009W YCR100CP25606 316 aa2.01□□□□□ -2.09
MSL1YIR009W NDI1P32340 513 aa2.01□□□□□ -2.09
MSL1YIR009W SSE1P32589 693 aaKnown RBP2.01□□□□□ -2.09
MSL1YIR009W RIB7P33312 244 aa2.01□□□□□ -2.09
MSL1YIR009W YKL097CP34245 136 aa2.01□□□□□ -2.09
MSL1YIR009W YBL028CP38202 106 aa2.01□□□□□ -2.09
MSL1YIR009W YDR089WP38966 869 aa2.01□□□□□ -2.09
MSL1YIR009W LYS1P38998 373 aaRIP-Chip data2.01□□□□□ -2.09 RIP-Chip
MSL1YIR009W YHC3P47040 408 aa2.01□□□□□ -2.09
MSL1YIR009W YIP1P53039 248 aa2.01□□□□□ -2.09
MSL1YIR009W FRE4P53746 719 aa2.01□□□□□ -2.09
MSL1YIR009W PRO2P54885 456 aaKnown RBP2.01□□□□□ -2.09
MSL1YIR009W IRC15Q02733 499 aa2.01□□□□□ -2.09
MSL1YIR009W YMR111CQ04461 462 aaPredicted RBP2.01□□□□□ -2.09
MSL1YIR009W PAL1Q05518 499 aaKnown RBP2.01□□□□□ -2.09
MSL1YIR009W YOR387CQ08910 206 aa2.01□□□□□ -2.09
MSL1YIR009W YPR022CQ12139 1133 aa2.01□□□□□ -2.09
MSL1YIR009W RRP12Q12754 1228 aaKnown RBP2.01□□□□□ -2.09
MSL1YIR009W NBL1Q3E7Y6 73 aa2.01□□□□□ -2.09
MSL1YIR009W SRN2Q99176 213 aa2.01□□□□□ -2.09
MSL1YIR009W YPR117WQ06116 2489 aa2□□□□□ -2.09
MSL1YIR009W NUM1Q00402 2748 aa2□□□□□ -2.09
MSL1YIR009W VPS63O13549 108 aa2□□□□□ -2.09
MSL1YIR009W SAM1P10659 382 aaKnown RBP2□□□□□ -2.09
MSL1YIR009W SPT15P13393 240 aaKnown RBP2□□□□□ -2.09
MSL1YIR009W SAM2P19358 384 aaKnown RBP2□□□□□ -2.09
MSL1YIR009W YCR007CP25354 239 aa2□□□□□ -2.09
MSL1YIR009W RDS1P25611 832 aa2□□□□□ -2.09
MSL1YIR009W DAL80P26343 269 aa2□□□□□ -2.09
MSL1YIR009W NAM9P27929 486 aa2□□□□□ -2.09
MSL1YIR009W PSO2P30620 661 aa2□□□□□ -2.09
MSL1YIR009W HAT2P39984 401 aa2□□□□□ -2.09
MSL1YIR009W MMF1P40185 145 aaKnown RBP2□□□□□ -2.09
MSL1YIR009W PAC11P40960 533 aa2□□□□□ -2.09
MSL1YIR009W EFM3P47163 339 aa2□□□□□ -2.09
MSL1YIR009W BRO1P48582 844 aa2□□□□□ -2.09
MSL1YIR009W SDT1P53078 280 aa2□□□□□ -2.09
MSL1YIR009W GPI15P53961 229 aa2□□□□□ -2.09
MSL1YIR009W PNG1Q02890 363 aa2□□□□□ -2.09
MSL1YIR009W BET5Q03630 159 aa2□□□□□ -2.09
MSL1YIR009W YMR310CQ04867 317 aaPredicted RBP2□□□□□ -2.09
MSL1YIR009W SNT309Q06091 175 aaPredicted RBP2□□□□□ -2.09
MSL1YIR009W NDL1Q06568 189 aa2□□□□□ -2.09
MSL1YIR009W ARR1Q06596 294 aa2□□□□□ -2.09
MSL1YIR009W NSE1Q07913 336 aa2□□□□□ -2.09
MSL1YIR009W TMC1Q08422 150 aaPredicted RBP2□□□□□ -2.09
MSL1YIR009W BUG1Q12191 341 aa2□□□□□ -2.09
MSL1YIR009W MRPL23Q12487 163 aaPredicted RBP2□□□□□ -2.09
MSL1YIR009W SFG1Q12507 346 aa2□□□□□ -2.09
MSL1YIR009W RAD61Q99359 647 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms