RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	SAS2	P40963	338 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	KTR5	P53966	522 aa	Predicted RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	ARX1	Q03862	593 aa	Known RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	ROY1	Q04847	553 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	ADF1	Q2V2Q1	113 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	AFI1	Q99222	893 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	RIP1	P08067	215 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	DAP2	P18962	818 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	RNA14	P25298	677 aa	Known RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	NAM9	P27929	486 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	YOX1	P34161	385 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	PEX32	P38292	413 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	SDS24	P38314	527 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	CCT2	P39076	527 aa	Known RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	MST28	P39552	234 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	INA22	P40576	216 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	SPG5	P42933	373 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	COS5	P47187	383 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	HOP2	P53187	214 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	ELP3	Q02908	557 aa	Known RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	PPM1	Q04081	328 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	ECM18	Q04623	453 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	MDM36	Q06820	579 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	COS7	Q07788	383 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	TLG2	Q08144	397 aa		2.72	□□□□□ -1.97
VHR1	YIL056W	SNX3	Q08826	162 aa	Known RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	RRP12	Q12754	1228 aa	Known RBP	2.72	□□□□□ -1.97
VHR1	YIL056W	DPH5	P32469	300 aa	Predicted RBP	2.71	□□□□□ -1.98
VHR1	YIL056W	ALD5	P40047	520 aa	Known RBP	2.71	□□□□□ -1.98
VHR1	YIL056W	CAK1	P43568	368 aa	Predicted RBP	2.71	□□□□□ -1.98
VHR1	YIL056W	YJR011C	P47086	261 aa	Predicted RBP	2.71	□□□□□ -1.98
VHR1	YIL056W	PHB2	P50085	310 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	KAP120	Q02932	1032 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	GIP3	Q03016	1276 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	INP2	Q03824	705 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	DIS3	Q08162	1001 aa	Known RBP	2.71	□□□□□ -1.98
VHR1	YIL056W	SGT1	Q08446	395 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	VPS54	Q12071	889 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	RRD2	Q12461	358 aa		2.71	□□□□□ -1.98
VHR1	YIL056W	PFK27	Q12471	397 aa	Predicted RBP	2.71	□□□□□ -1.98
VHR1	YIL056W	TDH1	P00360	332 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	GAL7	P08431	366 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	RPL1A	P0CX43	217 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	RPL1B	P0CX44	217 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	ARO3	P14843	370 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	RPL5	P26321	297 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	HMX1	P32339	317 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	LTV1	P34078	463 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	KKQ8	P36004	724 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	MIX23	P38162	196 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	AIM10	P39965	576 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	CHS6	P40955	746 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	CUE3	P53137	624 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	SKO1	Q02100	647 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	EGD1	Q02642	157 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	ABZ2	Q03266	374 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	MSC3	Q05812	728 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	TY3A-G	Q12173	290 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	TY3A-I	Q99219	290 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	RAD61	Q99359	647 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	URA4	P20051	364 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	DAL2	P25335	343 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	SNT1	P25357	1226 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	ARO2	P28777	376 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	EFB1	P32471	206 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	HIR2	P32480	875 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	MUD1	P32605	298 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	RRT2	P38332	387 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	PRM5	P40476	318 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	YIL089W	P40500	205 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	YGR210C	P42942	411 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	LIA1	P47120	325 aa	Known RBP	2.7	□□□□□ -1.98
VHR1	YIL056W	YGR111W	P53265	400 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	YNL050C	P53952	270 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	SNZ1	Q03148	297 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	YMR130W	Q04223	302 aa		2.7	□□□□□ -1.98
VHR1	YIL056W	VPS3	P23643	1011 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	LSB5	P25369	354 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	KRE2	P27809	442 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	ASF2	P32448	525 aa	Predicted RBP	2.69	□□□□□ -1.98
VHR1	YIL056W	RPT5	P33297	434 aa	Known RBP	2.69	□□□□□ -1.98
VHR1	YIL056W	MLC1	P53141	149 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	GIM3	P53900	129 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	REX2	P54964	269 aa	Known RBP	2.69	□□□□□ -1.98
VHR1	YIL056W	HER2	Q03557	464 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	HRI1	Q05905	244 aa	Known RBP	2.69	□□□□□ -1.98
VHR1	YIL056W	YIL002W-A	Q3E7Z5	69 aa		2.69	□□□□□ -1.98
VHR1	YIL056W	RPL6B	P05739	176 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	SIN4	P32259	974 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	KRE6	P32486	720 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	DOA4	P32571	926 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	YEL045C	P32616	141 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	MNS1	P32906	549 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	YBR056W	P38081	501 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	RFC3	P38629	340 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	WSS1	P38838	269 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	GCN20	P43535	752 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	YNR048W	P53740	393 aa		2.68	□□□□□ -1.98
VHR1	YIL056W	RPL6A	Q02326	176 aa	Known RBP	2.68	□□□□□ -1.98
VHR1	YIL056W	YMR181C	Q03231	154 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms