RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W NTC20P38302 140 aaPredicted RBP2.14□□□□□ -2.07
RPF1YHR088W SMF1P38925 575 aa2.14□□□□□ -2.07
RPF1YHR088W YER184CP39961 794 aa2.14□□□□□ -2.07
RPF1YHR088W COS5P47187 383 aa2.14□□□□□ -2.07
RPF1YHR088W SOR2Q07786 357 aa2.14□□□□□ -2.07
RPF1YHR088W COS7Q07788 383 aa2.14□□□□□ -2.07
RPF1YHR088W VAM3Q12241 283 aa2.14□□□□□ -2.07
RPF1YHR088W GRX6Q12438 231 aa2.14□□□□□ -2.07
RPF1YHR088W APC2Q12440 853 aa2.14□□□□□ -2.07
RPF1YHR088W ARG3P05150 338 aa2.13□□□□□ -2.07
RPF1YHR088W STE7P06784 515 aa2.13□□□□□ -2.07
RPF1YHR088W RPL3P14126 387 aaKnown RBP2.13□□□□□ -2.07
RPF1YHR088W GFD2P25370 566 aaKnown RBP2.13□□□□□ -2.07
RPF1YHR088W BEM1P29366 551 aa2.13□□□□□ -2.07
RPF1YHR088W YHK8P38776 514 aa2.13□□□□□ -2.07
RPF1YHR088W CHL4P38907 458 aa2.13□□□□□ -2.07
RPF1YHR088W PHO86P46956 311 aa2.13□□□□□ -2.07
RPF1YHR088W LCB3P47013 409 aa2.13□□□□□ -2.07
RPF1YHR088W VHT1P53241 593 aa2.13□□□□□ -2.07
RPF1YHR088W TIM10P87108 93 aa2.13□□□□□ -2.07
RPF1YHR088W HOT1Q03213 719 aa2.13□□□□□ -2.07
RPF1YHR088W YLR345WQ06137 509 aa2.13□□□□□ -2.07
RPF1YHR088W SIL1Q08199 421 aa2.13□□□□□ -2.07
RPF1YHR088W DPH5P32469 300 aaPredicted RBP2.12□□□□□ -2.07
RPF1YHR088W CYM1P32898 989 aa2.12□□□□□ -2.07
RPF1YHR088W TDA1Q03533 586 aa2.12□□□□□ -2.07
RPF1YHR088W YDL114WQ07530 308 aa2.12□□□□□ -2.07
RPF1YHR088W SLF1Q12034 447 aaKnown RBP2.12□□□□□ -2.07
RPF1YHR088W HTZ1Q12692 134 aaKnown RBP2.12□□□□□ -2.07
RPF1YHR088W HOM3P10869 527 aa2.11□□□□□ -2.07
RPF1YHR088W NIP1P32497 812 aaKnown RBP2.11□□□□□ -2.07
RPF1YHR088W WSS1P38838 269 aa2.11□□□□□ -2.07
RPF1YHR088W YGR067CP53243 804 aa2.11□□□□□ -2.07
RPF1YHR088W RPS19AP07280 144 aaKnown RBP2.1□□□□□ -2.07
RPF1YHR088W RPS19BP07281 144 aaPredicted RBP2.1□□□□□ -2.07
RPF1YHR088W MRP7P12687 371 aa2.1□□□□□ -2.07
RPF1YHR088W RRN10P38204 145 aa2.1□□□□□ -2.07
RPF1YHR088W FRT2P39734 528 aa2.1□□□□□ -2.07
RPF1YHR088W IRC6P43615 237 aa2.1□□□□□ -2.07
RPF1YHR088W YGR250CP53316 781 aaKnown RBP2.1□□□□□ -2.07
RPF1YHR088W RPA49Q01080 415 aaPredicted RBP2.1□□□□□ -2.07
RPF1YHR088W RPL21AQ02753 160 aaKnown RBP2.1□□□□□ -2.07
RPF1YHR088W COG4Q06096 861 aa2.1□□□□□ -2.07
RPF1YHR088W YPR195CQ06594 109 aa2.1□□□□□ -2.07
RPF1YHR088W MFG1Q07684 458 aa2.1□□□□□ -2.07
RPF1YHR088W MED1Q12321 566 aa2.1□□□□□ -2.07
RPF1YHR088W RPL21BQ12672 160 aaKnown RBP2.1□□□□□ -2.07
RPF1YHR088W SRV2P17555 526 aaKnown RBP2.09□□□□□ -2.07
RPF1YHR088W EXG1P23776 448 aaKnown RBP2.09□□□□□ -2.07
RPF1YHR088W ROX1P25042 368 aa2.09□□□□□ -2.07
RPF1YHR088W STP2P38704 541 aa2.09□□□□□ -2.07
RPF1YHR088W PEX22P39718 180 aa2.09□□□□□ -2.07
RPF1YHR088W YGL138CP53122 345 aa2.09□□□□□ -2.07
RPF1YHR088W MMT1Q03218 510 aa2.09□□□□□ -2.07
RPF1YHR088W RRI2Q12348 645 aa2.09□□□□□ -2.07
RPF1YHR088W CAP2P13517 287 aa2.08□□□□□ -2.08
RPF1YHR088W RAD5P32849 1169 aaPredicted RBP2.08□□□□□ -2.08
RPF1YHR088W SKN1P33336 771 aa2.08□□□□□ -2.08
RPF1YHR088W YIR035CP40579 254 aa2.08□□□□□ -2.08
RPF1YHR088W TOS3P43637 560 aa2.08□□□□□ -2.08
RPF1YHR088W SKO1Q02100 647 aa2.08□□□□□ -2.08
RPF1YHR088W NCA2Q12374 616 aa2.08□□□□□ -2.08
RPF1YHR088W PUT4P15380 627 aa2.07□□□□□ -2.08
RPF1YHR088W CKA1P15790 372 aa2.07□□□□□ -2.08
RPF1YHR088W PTK1P36002 662 aaPredicted RBP2.07□□□□□ -2.08
RPF1YHR088W LSM12P38828 187 aaKnown RBP2.07□□□□□ -2.08
RPF1YHR088W PFS1P38872 237 aa2.07□□□□□ -2.08
RPF1YHR088W STD1Q02794 444 aa2.07□□□□□ -2.08
RPF1YHR088W YME2P32843 850 aa2.06□□□□□ -2.08
RPF1YHR088W MMS4P38257 691 aa2.06□□□□□ -2.08
RPF1YHR088W CLB3P24870 427 aa2.05□□□□□ -2.08
RPF1YHR088W GIT1P25346 518 aa2.05□□□□□ -2.08
RPF1YHR088W FUN26P31381 517 aa2.05□□□□□ -2.08
RPF1YHR088W PRY2P36110 329 aa2.05□□□□□ -2.08
RPF1YHR088W SOL2P37262 315 aa2.05□□□□□ -2.08
RPF1YHR088W SPO73P40031 143 aa2.05□□□□□ -2.08
RPF1YHR088W YPS6P40583 537 aa2.05□□□□□ -2.08
RPF1YHR088W CPR7P47103 393 aa2.05□□□□□ -2.08
RPF1YHR088W DIS3Q08162 1001 aaKnown RBP2.05□□□□□ -2.08
RPF1YHR088W FCY22Q12119 530 aa2.05□□□□□ -2.08
RPF1YHR088W MED2Q12124 431 aa2.05□□□□□ -2.08
RPF1YHR088W RUP1Q12242 671 aa2.05□□□□□ -2.08
RPF1YHR088W YDR061WQ12298 539 aa2.05□□□□□ -2.08
RPF1YHR088W RTN2Q12443 393 aa2.05□□□□□ -2.08
RPF1YHR088W ADE4P04046 510 aaKnown RBP2.04□□□□□ -2.08
RPF1YHR088W MET17P06106 444 aa2.04□□□□□ -2.08
RPF1YHR088W ASP3-2P0CX77 362 aa2.04□□□□□ -2.08
RPF1YHR088W ASP3-3P0CX78 362 aa2.04□□□□□ -2.08
RPF1YHR088W ASP3-4P0CX79 362 aa2.04□□□□□ -2.08
RPF1YHR088W ASP3-1P0CZ17 362 aa2.04□□□□□ -2.08
RPF1YHR088W COQ5P49017 307 aa2.04□□□□□ -2.08
RPF1YHR088W RPN14P53196 417 aa2.04□□□□□ -2.08
RPF1YHR088W RRP46P53256 223 aaPredicted RBP2.04□□□□□ -2.08
RPF1YHR088W COS1P53822 381 aa2.04□□□□□ -2.08
RPF1YHR088W LDB17Q12342 491 aa2.04□□□□□ -2.08
RPF1YHR088W POM152P39685 1337 aa2.03□□□□□ -2.08
RPF1YHR088W PAB1P04147 577 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08 RIP-Chip
RPF1YHR088W IMA3P0CW40 589 aa2.03□□□□□ -2.08
RPF1YHR088W IMA4P0CW41 589 aa2.03□□□□□ -2.08
RPF1YHR088W IMA2Q08295 589 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms