RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A YGR111WP53265 400 aa2.59□□□□□ -1.99
YGR109W-AYGR109W-A MTQ1P53944 314 aa2.59□□□□□ -1.99
YGR109W-AYGR109W-A RPN9Q04062 393 aaKnown RBP2.59□□□□□ -1.99
YGR109W-AYGR109W-A YLR456WQ06199 204 aa2.59□□□□□ -1.99
YGR109W-AYGR109W-A YBR056WP38081 501 aa2.58□□□□□ -2
YGR109W-AYGR109W-A CHK1P38147 527 aa2.58□□□□□ -2
YGR109W-AYGR109W-A SRP72P38688 640 aaKnown RBP2.58□□□□□ -2
YGR109W-AYGR109W-A SBE22P38814 852 aa2.58□□□□□ -2
YGR109W-AYGR109W-A GAT2P40209 560 aa2.58□□□□□ -2
YGR109W-AYGR109W-A DFG10P40526 253 aa2.58□□□□□ -2
YGR109W-AYGR109W-A CCE1Q03702 353 aa2.58□□□□□ -2
YGR109W-AYGR109W-A PRP42Q03776 544 aaKnown RBP2.58□□□□□ -2
YGR109W-AYGR109W-A RRP9Q06506 573 aaKnown RBP2.58□□□□□ -2
YGR109W-AYGR109W-A AEP3Q12089 606 aa2.58□□□□□ -2
YGR109W-AYGR109W-A MED2Q12124 431 aa2.58□□□□□ -2
YGR109W-AYGR109W-A YCL068CP25593 260 aa2.57□□□□□ -2
YGR109W-AYGR109W-A RIM1P32445 135 aaKnown RBP2.57□□□□□ -2
YGR109W-AYGR109W-A GPI16P38875 610 aa2.57□□□□□ -2
YGR109W-AYGR109W-A FAD1P38913 306 aa2.57□□□□□ -2
YGR109W-AYGR109W-A STD1Q02794 444 aa2.57□□□□□ -2
YGR109W-AYGR109W-A GYL1Q04322 720 aa2.57□□□□□ -2
YGR109W-AYGR109W-A DCI1Q08558 271 aa2.57□□□□□ -2
YGR109W-AYGR109W-A TPT1Q12272 230 aaKnown RBP2.57□□□□□ -2
YGR109W-AYGR109W-A EXG1P23776 448 aaKnown RBP2.56□□□□□ -2
YGR109W-AYGR109W-A PHA2P32452 334 aa2.56□□□□□ -2
YGR109W-AYGR109W-A CYS4P32582 507 aaKnown RBP2.56□□□□□ -2
YGR109W-AYGR109W-A SPT10P35208 640 aa2.56□□□□□ -2
YGR109W-AYGR109W-A RTC2P38279 296 aa2.56□□□□□ -2
YGR109W-AYGR109W-A STN1P38960 494 aa2.56□□□□□ -2
YGR109W-AYGR109W-A YER079WP40052 210 aaKnown RBP2.56□□□□□ -2
YGR109W-AYGR109W-A YIL029CP40538 142 aa2.56□□□□□ -2
YGR109W-AYGR109W-A YML6P51998 286 aa2.56□□□□□ -2
YGR109W-AYGR109W-A RSC1P53236 928 aa2.56□□□□□ -2
YGR109W-AYGR109W-A MMT1Q03218 510 aa2.56□□□□□ -2
YGR109W-AYGR109W-A RAX1Q08760 435 aa2.56□□□□□ -2
YGR109W-AYGR109W-A JID1Q12350 301 aa2.56□□□□□ -2
YGR109W-AYGR109W-A ERP4Q12450 207 aa2.56□□□□□ -2
YGR109W-AYGR109W-A YBL111CQ3E7Y5 667 aa2.56□□□□□ -2
YGR109W-AYGR109W-A MSI1P13712 422 aa2.55□□□□□ -2
YGR109W-AYGR109W-A ALG1P16661 449 aa2.55□□□□□ -2
YGR109W-AYGR109W-A PIB2P53191 635 aa2.55□□□□□ -2
YGR109W-AYGR109W-A COS1P53822 381 aa2.55□□□□□ -2
YGR109W-AYGR109W-A YDR341CQ05506 607 aaKnown RBP2.55□□□□□ -2
YGR109W-AYGR109W-A NDE2Q07500 545 aa2.55□□□□□ -2
YGR109W-AYGR109W-A SPE3Q12074 293 aaKnown RBP2.55□□□□□ -2
YGR109W-AYGR109W-A NCA2Q12374 616 aa2.55□□□□□ -2
YGR109W-AYGR109W-A SNU66Q12420 587 aaPredicted RBP2.55□□□□□ -2
YGR109W-AYGR109W-A DST1P07273 309 aa2.54□□□□□ -2
YGR109W-AYGR109W-A CAP2P13517 287 aa2.54□□□□□ -2
YGR109W-AYGR109W-A AAT2P23542 418 aaKnown RBP2.54□□□□□ -2
YGR109W-AYGR109W-A OLA1P38219 394 aaKnown RBP2.54□□□□□ -2
YGR109W-AYGR109W-A INM1P38710 295 aa2.54□□□□□ -2
YGR109W-AYGR109W-A EFM4P40516 257 aa2.54□□□□□ -2
YGR109W-AYGR109W-A LCB2P40970 561 aa2.54□□□□□ -2
YGR109W-AYGR109W-A YFR057WP43625 151 aa2.54□□□□□ -2
YGR109W-AYGR109W-A TOS3P43637 560 aa2.54□□□□□ -2
YGR109W-AYGR109W-A BIR1P47134 954 aa2.54□□□□□ -2
YGR109W-AYGR109W-A MRM2P53123 320 aa2.54□□□□□ -2
YGR109W-AYGR109W-A LIP2Q06005 328 aa2.54□□□□□ -2
YGR109W-AYGR109W-A RIF2Q06208 395 aa2.54□□□□□ -2
YGR109W-AYGR109W-A SMF3Q12078 473 aaPredicted RBP2.54□□□□□ -2
YGR109W-AYGR109W-A FAB1P34756 2278 aa2.53□□□□□ -2
YGR109W-AYGR109W-A OPI3P05375 206 aa2.53□□□□□ -2
YGR109W-AYGR109W-A CDC21P06785 304 aa2.53□□□□□ -2
YGR109W-AYGR109W-A DPH5P32469 300 aaPredicted RBP2.53□□□□□ -2
YGR109W-AYGR109W-A SKN1P33336 771 aa2.53□□□□□ -2
YGR109W-AYGR109W-A LTV1P34078 463 aa2.53□□□□□ -2
YGR109W-AYGR109W-A PXA2P34230 853 aa2.53□□□□□ -2
YGR109W-AYGR109W-A RRP1P35178 278 aaPredicted RBP2.53□□□□□ -2
YGR109W-AYGR109W-A ATP3P38077 311 aaKnown RBP2.53□□□□□ -2
YGR109W-AYGR109W-A BAT1P38891 393 aaKnown RBP2.53□□□□□ -2
YGR109W-AYGR109W-A COX14P39103 70 aa2.53□□□□□ -2
YGR109W-AYGR109W-A BUD27P43573 796 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
YGR109W-AYGR109W-A TOS2P50078 622 aa2.53□□□□□ -2
YGR109W-AYGR109W-A ROG1P53118 685 aa2.53□□□□□ -2
YGR109W-AYGR109W-A CIK1Q01649 594 aa2.53□□□□□ -2
YGR109W-AYGR109W-A VHS1Q03785 461 aa2.53□□□□□ -2
YGR109W-AYGR109W-A YGK3Q12222 375 aaPredicted RBP2.53□□□□□ -2
YGR109W-AYGR109W-A RPN5Q12250 445 aaKnown RBP2.53□□□□□ -2
YGR109W-AYGR109W-A SSC1P0CS90 654 aaKnown RBP2.52□□□□□ -2.01
YGR109W-AYGR109W-A RPL1AP0CX43 217 aaKnown RBP2.52□□□□□ -2.01
YGR109W-AYGR109W-A RPL1BP0CX44 217 aaKnown RBP2.52□□□□□ -2.01
YGR109W-AYGR109W-A RPB5P20434 215 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A MNE1P24720 663 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A PRR1P28708 518 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A HSP104P31539 908 aaKnown RBP2.52□□□□□ -2.01
YGR109W-AYGR109W-A QDR3P38227 689 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A SEO1P39709 593 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A OXA1P39952 402 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A YER186CP40101 306 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A LCB3P47013 409 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A BNS1P50084 137 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A PMT5P52867 743 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A MEH1Q02205 184 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A ECM7Q06200 448 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A MDM36Q06820 579 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A RNH203Q12338 110 aa2.52□□□□□ -2.01
YGR109W-AYGR109W-A PSK1P31374 1356 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A PDE2P06776 526 aa2.51□□□□□ -2.01
YGR109W-AYGR109W-A ATP1P07251 545 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms