RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W MMF1P40185 145 aaKnown RBP2.97□□□□□ -1.93
SEC4YFL005W JLP2P40206 208 aa2.97□□□□□ -1.93
SEC4YFL005W SIM1P40472 476 aa2.97□□□□□ -1.93
SEC4YFL005W TOS3P43637 560 aa2.97□□□□□ -1.93
SEC4YFL005W YPL107WQ02873 248 aa2.97□□□□□ -1.93
SEC4YFL005W ELP3Q02908 557 aaKnown RBP2.97□□□□□ -1.93
SEC4YFL005W CCE1Q03702 353 aa2.97□□□□□ -1.93
SEC4YFL005W IPK1Q06667 281 aa2.97□□□□□ -1.93
SEC4YFL005W YFH1Q07540 174 aa2.97□□□□□ -1.93
SEC4YFL005W RAX1Q08760 435 aa2.97□□□□□ -1.93
SEC4YFL005W YOR387CQ08910 206 aa2.97□□□□□ -1.93
SEC4YFL005W RNH203Q12338 110 aa2.97□□□□□ -1.93
SEC4YFL005W NCA2Q12374 616 aa2.97□□□□□ -1.93
SEC4YFL005W SRN2Q99176 213 aa2.97□□□□□ -1.93
SEC4YFL005W ATP1P07251 545 aaKnown RBP2.96□□□□□ -1.94
SEC4YFL005W RPL12AP0CX53 165 aaKnown RBP2.96□□□□□ -1.94
SEC4YFL005W RPL12BP0CX54 165 aa2.96□□□□□ -1.94
SEC4YFL005W OPI1P21957 404 aa2.96□□□□□ -1.94
SEC4YFL005W MSP1P28737 362 aa2.96□□□□□ -1.94
SEC4YFL005W ARO2P28777 376 aaKnown RBP2.96□□□□□ -1.94
SEC4YFL005W YSW1P38280 609 aa2.96□□□□□ -1.94
SEC4YFL005W NDT80P38830 627 aa2.96□□□□□ -1.94
SEC4YFL005W MNL1P38888 796 aa2.96□□□□□ -1.94
SEC4YFL005W YPI1P43587 155 aa2.96□□□□□ -1.94
SEC4YFL005W YIP5P53108 310 aa2.96□□□□□ -1.94
SEC4YFL005W MTM1P53320 366 aa2.96□□□□□ -1.94
SEC4YFL005W RTT102P53330 157 aa2.96□□□□□ -1.94
SEC4YFL005W URC2Q04411 772 aa2.96□□□□□ -1.94
SEC4YFL005W ECM7Q06200 448 aa2.96□□□□□ -1.94
SEC4YFL005W NDE2Q07500 545 aa2.96□□□□□ -1.94
SEC4YFL005W TLG2Q08144 397 aa2.96□□□□□ -1.94
SEC4YFL005W TRP1P00912 224 aa2.95□□□□□ -1.94
SEC4YFL005W SUP35P05453 685 aaKnown RBP2.95□□□□□ -1.94
SEC4YFL005W DAP2P18962 818 aa2.95□□□□□ -1.94
SEC4YFL005W EXG1P23776 448 aaKnown RBP2.95□□□□□ -1.94
SEC4YFL005W SLM5P25345 492 aaKnown RBP2.95□□□□□ -1.94
SEC4YFL005W COX13P32799 129 aa2.95□□□□□ -1.94
SEC4YFL005W MNS1P32906 549 aa2.95□□□□□ -1.94
SEC4YFL005W LAS1P36146 502 aaPredicted RBP2.95□□□□□ -1.94
SEC4YFL005W AVT5P38176 459 aa2.95□□□□□ -1.94
SEC4YFL005W PTH1P38876 190 aaKnown RBP2.95□□□□□ -1.94
SEC4YFL005W REE1P40893 198 aa2.95□□□□□ -1.94
SEC4YFL005W STE24P47154 453 aa2.95□□□□□ -1.94
SEC4YFL005W YGL242CP53066 181 aa2.95□□□□□ -1.94
SEC4YFL005W YGR117CP53270 476 aa2.95□□□□□ -1.94
SEC4YFL005W CWC25P53854 179 aaKnown RBP2.95□□□□□ -1.94
SEC4YFL005W SMF3Q12078 473 aaPredicted RBP2.95□□□□□ -1.94
SEC4YFL005W NFI1Q12216 726 aa2.95□□□□□ -1.94
SEC4YFL005W SPT7P35177 1332 aa2.94□□□□□ -1.94
SEC4YFL005W OPI3P05375 206 aa2.94□□□□□ -1.94
SEC4YFL005W CYC3P06182 269 aa2.94□□□□□ -1.94
SEC4YFL005W ARF1P11076 181 aaKnown RBP2.94□□□□□ -1.94
SEC4YFL005W CAP2P13517 287 aa2.94□□□□□ -1.94
SEC4YFL005W NAM9P27929 486 aa2.94□□□□□ -1.94
SEC4YFL005W PHA2P32452 334 aa2.94□□□□□ -1.94
SEC4YFL005W KAR9P32526 644 aa2.94□□□□□ -1.94
SEC4YFL005W SKT5P34226 696 aa2.94□□□□□ -1.94
SEC4YFL005W YKL097CP34245 136 aa2.94□□□□□ -1.94
SEC4YFL005W DOA1P36037 715 aa2.94□□□□□ -1.94
SEC4YFL005W RFS1P38234 210 aaKnown RBP2.94□□□□□ -1.94
SEC4YFL005W CAJ1P39101 391 aa2.94□□□□□ -1.94
SEC4YFL005W COX14P39103 70 aa2.94□□□□□ -1.94
SEC4YFL005W ATM1P40416 690 aa2.94□□□□□ -1.94
SEC4YFL005W BTN2P53286 410 aa2.94□□□□□ -1.94
SEC4YFL005W SPR6Q01684 191 aa2.94□□□□□ -1.94
SEC4YFL005W AAD15Q08361 143 aa2.94□□□□□ -1.94
SEC4YFL005W YRM1Q12340 786 aa2.94□□□□□ -1.94
SEC4YFL005W TFB5Q3E7C1 72 aaPredicted RBP2.94□□□□□ -1.94
SEC4YFL005W POM152P39685 1337 aa2.93□□□□□ -1.94
SEC4YFL005W PAB1P04147 577 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94 RIP-Chip
SEC4YFL005W PHO84P25297 587 aaKnown RBP2.93□□□□□ -1.94
SEC4YFL005W DAL2P25335 343 aa2.93□□□□□ -1.94
SEC4YFL005W FAA1P30624 700 aaKnown RBP2.93□□□□□ -1.94
SEC4YFL005W YEF1P32622 495 aa2.93□□□□□ -1.94
SEC4YFL005W DED81P38707 554 aaKnown RBP2.93□□□□□ -1.94
SEC4YFL005W SBE22P38814 852 aa2.93□□□□□ -1.94
SEC4YFL005W YGR210CP42942 411 aa2.93□□□□□ -1.94
SEC4YFL005W PMT5P52867 743 aa2.93□□□□□ -1.94
SEC4YFL005W HRI1Q05905 244 aaKnown RBP2.93□□□□□ -1.94
SEC4YFL005W MDM36Q06820 579 aa2.93□□□□□ -1.94
SEC4YFL005W NOP6Q07623 225 aaKnown RBP2.93□□□□□ -1.94
SEC4YFL005W TMS1Q12116 473 aa2.93□□□□□ -1.94
SEC4YFL005W TPK3P05986 398 aa2.92□□□□□ -1.94
SEC4YFL005W RPS8AP0CX39 200 aaKnown RBP2.92□□□□□ -1.94
SEC4YFL005W RPS8BP0CX40 200 aaKnown RBP2.92□□□□□ -1.94
SEC4YFL005W POT1P27796 417 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
SEC4YFL005W ADH5P38113 351 aaKnown RBP2.92□□□□□ -1.94
SEC4YFL005W YBL028CP38202 106 aa2.92□□□□□ -1.94
SEC4YFL005W SPP381P38282 291 aaPredicted RBP2.92□□□□□ -1.94
SEC4YFL005W MSG5P38590 489 aa2.92□□□□□ -1.94
SEC4YFL005W YIL029CP40538 142 aa2.92□□□□□ -1.94
SEC4YFL005W SPG5P42933 373 aa2.92□□□□□ -1.94
SEC4YFL005W MDE1P47095 244 aa2.92□□□□□ -1.94
SEC4YFL005W MRM2P53123 320 aa2.92□□□□□ -1.94
SEC4YFL005W YGR016WP53209 190 aa2.92□□□□□ -1.94
SEC4YFL005W MTQ1P53944 314 aa2.92□□□□□ -1.94
SEC4YFL005W NUP116Q02630 1113 aa2.92□□□□□ -1.94
SEC4YFL005W CUE5Q08412 411 aaKnown RBP2.92□□□□□ -1.94
SEC4YFL005W YOP1Q12402 180 aa2.92□□□□□ -1.94
SEC4YFL005W SSC1P0CS90 654 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 804.5 ms