RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	MNT4	P53745	580 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	ELP4	Q02884	456 aa	Known RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	PEX25	Q02969	394 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	RRT8	Q08219	342 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	SCP1	Q08873	200 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	TY1A-GR1	Q12085	440 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	NMD4	Q12129	218 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	HOS1	Q12214	470 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	MDY2	Q12285	212 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	TY1A-OL	Q92392	440 aa	Known RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	IZH4	Q99393	312 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	FUM1	P08417	488 aa	Known RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	DAL81	P21657	970 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	GRR1	P24814	1151 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	SPT23	P35210	1082 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	MNN1	P39106	762 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	RSP5	P39940	809 aa	Known RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	ISC1	P40015	477 aa	Known RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	FIR1	P40020	876 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	YIL166C	P40445	542 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	YIL024C	P40543	189 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	MTR3	P48240	250 aa	Predicted RBP	5.22	□□□□□ -1.57
VTC2	YFL004W	PRM8	P53174	237 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	YDR387C	Q04162	555 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	GPN3	Q06543	272 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	ESC8	Q08119	714 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	YOL131W	Q08270	108 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	UAF30	Q08747	228 aa		5.22	□□□□□ -1.57
VTC2	YFL004W	ERG20	P08524	352 aa	Known RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	MIS1	P09440	975 aa	Known RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	RPS18A	P0CX55	146 aa	Known RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	RPS18B	P0CX56	146 aa	Predicted RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	MAS2	P11914	482 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	SNU114	P36048	1008 aa	Known RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	ERT1	P38140	529 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	RCK1	P38622	512 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	RTC3	P38804	111 aa	Predicted RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	FET3	P38993	636 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	ERV46	P39727	415 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	HPA3	P39979	161 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	ARF3	P40994	183 aa	RIP-Chip data	5.21	□□□□□ -1.57	RIP-Chip
VTC2	YFL004W	NSE4	P43124	402 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	RET2	P43621	546 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	NUP85	P46673	744 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	PBP1	P53297	722 aa	Known RBP	5.21	□□□□□ -1.57
VTC2	YFL004W	RSM27	P53305	110 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	MRPL22	P53881	309 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	NHX1	Q04121	633 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	THI73	Q07904	523 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	GLO4	Q12320	285 aa		5.21	□□□□□ -1.57
VTC2	YFL004W	PMD1	P32634	1753 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	ADE4	P04046	510 aa	Known RBP	5.21	□□□□□ -1.58
VTC2	YFL004W	CIT2	P08679	460 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	RAD27	P26793	382 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	DHR2	P36009	735 aa	Predicted RBP	5.21	□□□□□ -1.58
VTC2	YFL004W	MRPL7	P36519	292 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	XDJ1	P39102	459 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	SPO73	P40031	143 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	RGI1	P40043	161 aa	Predicted RBP	5.21	□□□□□ -1.58
VTC2	YFL004W	LSM4	P40070	187 aa	Known RBP	5.21	□□□□□ -1.58
VTC2	YFL004W	PGD1	P40356	397 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	SLM1	P40485	686 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	GLR1	P41921	483 aa	Known RBP	5.21	□□□□□ -1.58
VTC2	YFL004W	AVT1	P47082	602 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	NNF1	P47149	201 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	SNN1	P48232	102 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	RTS3	P53289	263 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	YDR109C	Q04585	715 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	GAS2	Q06135	555 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	THP1	Q08231	455 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	NRT1	Q08485	598 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	PUS9	Q12069	462 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	DIN7	Q12086	430 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	JLP1	Q12358	412 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	RKM5	Q12367	367 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	PCD1	Q12524	340 aa		5.21	□□□□□ -1.58
VTC2	YFL004W	SLH1	P53327	1967 aa	Known RBP	5.21	□□□□□ -1.58
VTC2	YFL004W	RPS9A	O13516	197 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	CYT1	P07143	309 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	GCD1	P09032	578 aa	Predicted RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	RPS4A	P0CX35	261 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	RPS4B	P0CX36	261 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	HNM1	P19807	563 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	UTR1	P21373	530 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	IFM1	P25038	676 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YCR101C	P25607	182 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	ECM25	P32525	599 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	SRP102	P36057	244 aa	Predicted RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	OCA5	P38738	679 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	RTT105	P40063	208 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	PRE6	P40303	254 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	GDS1	P41913	522 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	PSA1	P41940	361 aa	Known RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	YAE1	P47118	141 aa	Predicted RBP	5.2	□□□□□ -1.58
VTC2	YFL004W	GND2	P53319	492 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	ERV29	P53337	310 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	RRN9	P53437	365 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	RRN5	Q02983	363 aa		5.2	□□□□□ -1.58
VTC2	YFL004W	YMR130W	Q04223	302 aa		5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms