RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C DIS3Q08162 1001 aaKnown RBP4.45□□□□□ -1.7
NUP42YDR192C NRT1Q08485 598 aa4.45□□□□□ -1.7
NUP42YDR192C VPS54Q12071 889 aa4.45□□□□□ -1.7
NUP42YDR192C YLR112WQ12130 139 aa4.45□□□□□ -1.7
NUP42YDR192C HER1Q12276 1246 aa4.45□□□□□ -1.7
NUP42YDR192C HIS1P00498 297 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C IMA3P0CW40 589 aa4.44□□□□□ -1.7
NUP42YDR192C IMA4P0CW41 589 aa4.44□□□□□ -1.7
NUP42YDR192C SRV2P17555 526 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C REC107P21651 314 aa4.44□□□□□ -1.7
NUP42YDR192C YCP4P25349 247 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C YCR051WP25631 222 aa4.44□□□□□ -1.7
NUP42YDR192C URA7P28274 579 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C GPI10P30777 616 aa4.44□□□□□ -1.7
NUP42YDR192C NDI1P32340 513 aa4.44□□□□□ -1.7
NUP42YDR192C RIM1P32445 135 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C MAK5P38112 773 aaPredicted RBP4.44□□□□□ -1.7
NUP42YDR192C YSW1P38280 609 aa4.44□□□□□ -1.7
NUP42YDR192C SLX1P38324 304 aa4.44□□□□□ -1.7
NUP42YDR192C YHR210CP38893 341 aa4.44□□□□□ -1.7
NUP42YDR192C BTT1P40314 149 aaPredicted RBP4.44□□□□□ -1.7
NUP42YDR192C SEC28P40509 296 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C HXT14P42833 540 aa4.44□□□□□ -1.7
NUP42YDR192C SNG1P46950 547 aa4.44□□□□□ -1.7
NUP42YDR192C RTT101P47050 842 aa4.44□□□□□ -1.7
NUP42YDR192C SMM1P53720 384 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C RCF2P53721 224 aa4.44□□□□□ -1.7
NUP42YDR192C ADA2Q02336 434 aa4.44□□□□□ -1.7
NUP42YDR192C ENT5Q03769 411 aaKnown RBP4.44□□□□□ -1.7
NUP42YDR192C FAR8Q05040 523 aa4.44□□□□□ -1.7
NUP42YDR192C IMA2Q08295 589 aa4.44□□□□□ -1.7
NUP42YDR192C GPM3Q12326 303 aa4.44□□□□□ -1.7
NUP42YDR192C RRD2Q12461 358 aa4.44□□□□□ -1.7
NUP42YDR192C RRP36Q12481 300 aaPredicted RBP4.44□□□□□ -1.7
NUP42YDR192C YDL007C-AQ2V2Q0 85 aa4.44□□□□□ -1.7
NUP42YDR192C POT1P27796 417 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
NUP42YDR192C URA10P30402 227 aa4.43□□□□□ -1.7
NUP42YDR192C NIP1P32497 812 aaKnown RBP4.43□□□□□ -1.7
NUP42YDR192C YPT53P36019 220 aa4.43□□□□□ -1.7
NUP42YDR192C DUG2P38149 878 aa4.43□□□□□ -1.7
NUP42YDR192C GDT1P38301 280 aaPredicted RBP4.43□□□□□ -1.7
NUP42YDR192C RRP3P38712 501 aaKnown RBP4.43□□□□□ -1.7
NUP42YDR192C SMF2P38778 549 aa4.43□□□□□ -1.7
NUP42YDR192C LIN1P38852 340 aaPredicted RBP4.43□□□□□ -1.7
NUP42YDR192C TVP23P38962 199 aa4.43□□□□□ -1.7
NUP42YDR192C RTS2P40962 232 aa4.43□□□□□ -1.7
NUP42YDR192C GUF1P46943 645 aa4.43□□□□□ -1.7
NUP42YDR192C LIA1P47120 325 aaKnown RBP4.43□□□□□ -1.7
NUP42YDR192C SCW4P53334 386 aaKnown RBP4.43□□□□□ -1.7
NUP42YDR192C YML122CQ03207 126 aa4.43□□□□□ -1.7
NUP42YDR192C AIM32Q04689 311 aa4.43□□□□□ -1.7
NUP42YDR192C VTA1Q06263 330 aa4.43□□□□□ -1.7
NUP42YDR192C IZH4Q99393 312 aa4.43□□□□□ -1.7
NUP42YDR192C ARG4P04076 463 aaPredicted RBP4.42□□□□□ -1.7
NUP42YDR192C MAS1P10507 462 aa4.42□□□□□ -1.7
NUP42YDR192C HEM15P16622 393 aa4.42□□□□□ -1.7
NUP42YDR192C CBF1P17106 351 aa4.42□□□□□ -1.7
NUP42YDR192C PRP2P20095 876 aaPredicted RBP4.42□□□□□ -1.7
NUP42YDR192C PDR3P33200 976 aa4.42□□□□□ -1.7
NUP42YDR192C PHD1P36093 366 aa4.42□□□□□ -1.7
NUP42YDR192C AXL1P40851 1208 aa4.42□□□□□ -1.7
NUP42YDR192C YJR154WP47181 346 aa4.42□□□□□ -1.7
NUP42YDR192C PKP2P53170 491 aa4.42□□□□□ -1.7
NUP42YDR192C RHO4Q00246 291 aa4.42□□□□□ -1.7
NUP42YDR192C CDC14Q00684 551 aa4.42□□□□□ -1.7
NUP42YDR192C NUP100Q02629 959 aa4.42□□□□□ -1.7
NUP42YDR192C EKI1Q03764 534 aa4.42□□□□□ -1.7
NUP42YDR192C SPC24Q04477 213 aa4.42□□□□□ -1.7
NUP42YDR192C YLR012CQ07927 99 aa4.42□□□□□ -1.7
NUP42YDR192C CUE5Q08412 411 aaKnown RBP4.42□□□□□ -1.7
NUP42YDR192C DDC1Q08949 612 aa4.42□□□□□ -1.7
NUP42YDR192C TYR1P20049 452 aa4.41□□□□□ -1.7
NUP42YDR192C SGE1P33335 543 aa4.41□□□□□ -1.7
NUP42YDR192C COY1P34237 679 aa4.41□□□□□ -1.7
NUP42YDR192C YNK1P36010 153 aaKnown RBP4.41□□□□□ -1.7
NUP42YDR192C HEK2P38199 381 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
NUP42YDR192C FZO1P38297 855 aa4.41□□□□□ -1.7
NUP42YDR192C ATG12P38316 186 aa4.41□□□□□ -1.7
NUP42YDR192C AVT2P39981 480 aa4.41□□□□□ -1.7
NUP42YDR192C LSM5P40089 93 aaKnown RBP4.41□□□□□ -1.7
NUP42YDR192C KTR6P54070 446 aa4.41□□□□□ -1.7
NUP42YDR192C BET4Q00618 327 aa4.41□□□□□ -1.7
NUP42YDR192C SLT2Q00772 484 aa4.41□□□□□ -1.7
NUP42YDR192C ELP3Q02908 557 aaKnown RBP4.41□□□□□ -1.7
NUP42YDR192C YMR155WQ03795 547 aa4.41□□□□□ -1.7
NUP42YDR192C SFH1Q06168 426 aa4.41□□□□□ -1.7
NUP42YDR192C YLR352WQ06479 807 aa4.41□□□□□ -1.7
NUP42YDR192C LDB18Q07887 179 aa4.41□□□□□ -1.7
NUP42YDR192C CMS1Q07897 291 aaKnown RBP4.41□□□□□ -1.7
NUP42YDR192C THP1Q08231 455 aa4.41□□□□□ -1.7
NUP42YDR192C DAP1Q12091 152 aa4.41□□□□□ -1.7
NUP42YDR192C HRT3Q12347 344 aa4.41□□□□□ -1.7
NUP42YDR192C YPT1P01123 206 aaKnown RBP4.4□□□□□ -1.71
NUP42YDR192C RPL31BP0C2H9 113 aaKnown RBP4.4□□□□□ -1.71
NUP42YDR192C MTF1P14908 341 aaKnown RBP4.4□□□□□ -1.71
NUP42YDR192C PDX1P16451 410 aa4.4□□□□□ -1.71
NUP42YDR192C ADK2P26364 225 aa4.4□□□□□ -1.71
NUP42YDR192C RPC19P28000 142 aaKnown RBP4.4□□□□□ -1.71
NUP42YDR192C RPS0AP32905 252 aaKnown RBP4.4□□□□□ -1.71
NUP42YDR192C PMT1P33775 817 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 116.6 ms