RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W TFB4Q12004 338 aa11.65□□□□□ -0.54
PTP1YDL230W YTM1Q12024 460 aaPredicted RBP11.65□□□□□ -0.54
PTP1YDL230W RBD2Q12270 262 aa11.65□□□□□ -0.54
PTP1YDL230W DBP3P20447 523 aaKnown RBP11.64□□□□□ -0.55
PTP1YDL230W LYP1P32487 611 aa11.64□□□□□ -0.55
PTP1YDL230W ASC1P38011 319 aaKnown RBP11.64□□□□□ -0.55
PTP1YDL230W RRG9P40156 214 aa11.64□□□□□ -0.55
PTP1YDL230W PAC11P40960 533 aa11.64□□□□□ -0.55
PTP1YDL230W STB1P42845 420 aa11.64□□□□□ -0.55
PTP1YDL230W RET2P43621 546 aa11.64□□□□□ -0.55
PTP1YDL230W BIT61P47041 543 aa11.64□□□□□ -0.55
PTP1YDL230W SYF2P53277 215 aaPredicted RBP11.64□□□□□ -0.55
PTP1YDL230W MAK3Q03503 176 aa11.64□□□□□ -0.55
PTP1YDL230W RIM13Q03792 727 aa11.64□□□□□ -0.55
PTP1YDL230W RRP17Q04031 235 aaPredicted RBP11.64□□□□□ -0.55
PTP1YDL230W NEJ1Q06148 342 aa11.64□□□□□ -0.55
PTP1YDL230W MDM36Q06820 579 aa11.64□□□□□ -0.55
PTP1YDL230W YPR022CQ12139 1133 aa11.64□□□□□ -0.55
PTP1YDL230W SKS1Q12505 502 aa11.64□□□□□ -0.55
PTP1YDL230W STE7P06784 515 aa11.63□□□□□ -0.55
PTP1YDL230W ZWF1P11412 505 aaKnown RBP11.63□□□□□ -0.55
PTP1YDL230W ADE1P27616 306 aa11.63□□□□□ -0.55
PTP1YDL230W MRPL37P36532 105 aa11.63□□□□□ -0.55
PTP1YDL230W BIG1P38813 335 aa11.63□□□□□ -0.55
PTP1YDL230W CTF8P38877 133 aa11.63□□□□□ -0.55
PTP1YDL230W MBP1P39678 833 aa11.63□□□□□ -0.55
PTP1YDL230W JLP2P40206 208 aa11.63□□□□□ -0.55
PTP1YDL230W CDH1P53197 566 aa11.63□□□□□ -0.55
PTP1YDL230W YPL113CQ02961 396 aa11.63□□□□□ -0.55
PTP1YDL230W YDR444WQ04093 687 aa11.63□□□□□ -0.55
PTP1YDL230W SCL1P21243 252 aaKnown RBP11.62□□□□□ -0.55
PTP1YDL230W RPL24BP24000 155 aaKnown RBP11.62□□□□□ -0.55
PTP1YDL230W RRP7P25368 297 aaPredicted RBP11.62□□□□□ -0.55
PTP1YDL230W ARO7P32178 256 aa11.62□□□□□ -0.55
PTP1YDL230W NTH1P32356 751 aa11.62□□□□□ -0.55
PTP1YDL230W ERG1P32476 496 aaKnown RBP11.62□□□□□ -0.55
PTP1YDL230W SFC1P33303 322 aa11.62□□□□□ -0.55
PTP1YDL230W YRO2P38079 344 aa11.62□□□□□ -0.55
PTP1YDL230W SBE22P38814 852 aa11.62□□□□□ -0.55
PTP1YDL230W TAT2P38967 592 aa11.62□□□□□ -0.55
PTP1YDL230W COQ5P49017 307 aa11.62□□□□□ -0.55
PTP1YDL230W BIO5P53744 561 aaKnown RBP11.62□□□□□ -0.55
PTP1YDL230W RHO4Q00246 291 aa11.62□□□□□ -0.55
PTP1YDL230W CIK1Q01649 594 aa11.62□□□□□ -0.55
PTP1YDL230W RNH202Q05635 350 aa11.62□□□□□ -0.55
PTP1YDL230W DIN7Q12086 430 aa11.62□□□□□ -0.55
PTP1YDL230W MED2Q12124 431 aa11.62□□□□□ -0.55
PTP1YDL230W DCP1Q12517 231 aaPredicted RBP11.62□□□□□ -0.55
PTP1YDL230W GDI1P39958 451 aaKnown RBP11.61□□□□□ -0.55
PTP1YDL230W ZIM17P42844 174 aa11.61□□□□□ -0.55
PTP1YDL230W MRPS18P42847 217 aa11.61□□□□□ -0.55
PTP1YDL230W JHD2P47156 728 aaPredicted RBP11.61□□□□□ -0.55
PTP1YDL230W HXT16P47185 567 aa11.61□□□□□ -0.55
PTP1YDL230W RAI1P53063 387 aaKnown RBP11.61□□□□□ -0.55
PTP1YDL230W MTQ1P53944 314 aa11.61□□□□□ -0.55
PTP1YDL230W MTQ2Q03920 221 aaPredicted RBP11.61□□□□□ -0.55
PTP1YDL230W ERB1Q04660 807 aaKnown RBP11.61□□□□□ -0.55
PTP1YDL230W YPL066WQ12194 479 aa11.61□□□□□ -0.55
PTP1YDL230W RED1P14291 827 aa11.6□□□□□ -0.55
PTP1YDL230W IDP1P21954 428 aaKnown RBP11.6□□□□□ -0.55
PTP1YDL230W YCK1P23291 538 aa11.6□□□□□ -0.55
PTP1YDL230W BUD5P25300 642 aaPredicted RBP11.6□□□□□ -0.55
PTP1YDL230W SPT23P35210 1082 aa11.6□□□□□ -0.55
PTP1YDL230W PTC2P39966 464 aaKnown RBP11.6□□□□□ -0.55
PTP1YDL230W NEO1P40527 1151 aa11.6□□□□□ -0.55
PTP1YDL230W LSB3P43603 459 aaKnown RBP11.6□□□□□ -0.55
PTP1YDL230W SSY5P47002 699 aa11.6□□□□□ -0.55
PTP1YDL230W YJL055WP47044 245 aa11.6□□□□□ -0.55
PTP1YDL230W CWC23P52868 283 aaPredicted RBP11.6□□□□□ -0.55
PTP1YDL230W NQM1P53228 333 aaPredicted RBP11.6□□□□□ -0.55
PTP1YDL230W YGR168CP53293 376 aa11.6□□□□□ -0.55
PTP1YDL230W VPS36Q06696 566 aa11.6□□□□□ -0.55
PTP1YDL230W YPR084WQ06821 456 aa11.6□□□□□ -0.55
PTP1YDL230W BSC1Q12140 328 aa11.6□□□□□ -0.55
PTP1YDL230W SIA1Q12212 622 aa11.6□□□□□ -0.55
PTP1YDL230W PNS1Q12412 539 aa11.6□□□□□ -0.55
PTP1YDL230W PNO1Q99216 274 aaKnown RBP11.6□□□□□ -0.55
PTP1YDL230W MET2P08465 486 aa11.59□□□□□ -0.55
PTP1YDL230W TFS1P14306 219 aa11.59□□□□□ -0.55
PTP1YDL230W SEC2P17065 759 aa11.59□□□□□ -0.55
PTP1YDL230W KGD1P20967 1014 aaKnown RBP11.59□□□□□ -0.55
PTP1YDL230W TED1P40533 473 aa11.59□□□□□ -0.55
PTP1YDL230W HOS2P53096 452 aaPredicted RBP11.59□□□□□ -0.55
PTP1YDL230W ART5P53244 586 aaKnown RBP11.59□□□□□ -0.55
PTP1YDL230W FHN1P53279 174 aa11.59□□□□□ -0.55
PTP1YDL230W YML096WQ04489 525 aa11.59□□□□□ -0.55
PTP1YDL230W RQC1Q05468 723 aaKnown RBP11.59□□□□□ -0.55
PTP1YDL230W BOP2Q06150 570 aa11.59□□□□□ -0.55
PTP1YDL230W NGL1Q08213 363 aaKnown RBP11.59□□□□□ -0.55
PTP1YDL230W THP3Q12049 470 aaKnown RBP11.59□□□□□ -0.55
PTP1YDL230W FAB1P34756 2278 aa11.59□□□□□ -0.55
PTP1YDL230W NFT1P0CE68 1218 aa11.58□□□□□ -0.56
PTP1YDL230W GIT1P25346 518 aa11.58□□□□□ -0.56
PTP1YDL230W OAC1P32332 324 aa11.58□□□□□ -0.56
PTP1YDL230W YJL068CP40363 299 aa11.58□□□□□ -0.56
PTP1YDL230W MET28P40573 187 aa11.58□□□□□ -0.56
PTP1YDL230W SNM1P40993 198 aa11.58□□□□□ -0.56
PTP1YDL230W IRC6P43615 237 aa11.58□□□□□ -0.56
PTP1YDL230W RNH1Q04740 348 aa11.58□□□□□ -0.56
PTP1YDL230W YMR310CQ04867 317 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms