RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W CCT2P39076 527 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W YJL213WP40896 331 aa1.59□□□□□ -2.15
MSH5YDL154W WWM1P43582 211 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W YFR016CP43597 1233 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W RHO5P53879 331 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W KTR5P53966 522 aaPredicted RBP1.59□□□□□ -2.15
MSH5YDL154W ODC1Q03028 310 aa1.59□□□□□ -2.15
MSH5YDL154W BNA5Q05979 453 aa1.59□□□□□ -2.15
MSH5YDL154W SGT1Q08446 395 aa1.59□□□□□ -2.15
MSH5YDL154W PPT2Q12036 173 aa1.59□□□□□ -2.15
MSH5YDL154W TEF1P02994 458 aaKnown RBP1.59□□□□□ -2.16
MSH5YDL154W SCEIP03882 235 aa1.59□□□□□ -2.16
MSH5YDL154W RPL6BP05739 176 aaKnown RBP1.59□□□□□ -2.16
MSH5YDL154W RAD57P25301 460 aa1.59□□□□□ -2.16
MSH5YDL154W PUT3P25502 979 aaPredicted RBP1.59□□□□□ -2.16
MSH5YDL154W MSP1P28737 362 aa1.59□□□□□ -2.16
MSH5YDL154W DPH2P32461 534 aa1.59□□□□□ -2.16
MSH5YDL154W CYS4P32582 507 aaKnown RBP1.59□□□□□ -2.16
MSH5YDL154W ZTA1P38230 334 aaKnown RBP1.59□□□□□ -2.16
MSH5YDL154W PFF1P38244 976 aa1.59□□□□□ -2.16
MSH5YDL154W APE4P38821 490 aa1.59□□□□□ -2.16
MSH5YDL154W RPH1P39956 796 aa1.59□□□□□ -2.16
MSH5YDL154W SER3P40054 469 aa1.59□□□□□ -2.16
MSH5YDL154W SNM1P40993 198 aa1.59□□□□□ -2.16
MSH5YDL154W BRO1P48582 844 aa1.59□□□□□ -2.16
MSH5YDL154W RPL6AQ02326 176 aaKnown RBP1.59□□□□□ -2.16
MSH5YDL154W YLR456WQ06199 204 aa1.59□□□□□ -2.16
MSH5YDL154W TIM18Q08749 192 aa1.59□□□□□ -2.16
MSH5YDL154W ISN1Q99312 450 aa1.59□□□□□ -2.16
MSH5YDL154W SLM5P25345 492 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W PHO91P27514 894 aa1.58□□□□□ -2.16
MSH5YDL154W TIP1P27654 210 aaPredicted RBP1.58□□□□□ -2.16
MSH5YDL154W HSP104P31539 908 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W RIB5P38145 238 aa1.58□□□□□ -2.16
MSH5YDL154W PCA1P38360 1216 aa1.58□□□□□ -2.16
MSH5YDL154W HAT2P39984 401 aa1.58□□□□□ -2.16
MSH5YDL154W MMF1P40185 145 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W YMR147WP40218 223 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W VHS2P40463 436 aa1.58□□□□□ -2.16
MSH5YDL154W MKT1P40850 830 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W NCA3P46955 337 aa1.58□□□□□ -2.16
MSH5YDL154W ATP22P50273 684 aaPredicted RBP1.58□□□□□ -2.16
MSH5YDL154W FRE4P53746 719 aa1.58□□□□□ -2.16
MSH5YDL154W MRP51Q02950 344 aa1.58□□□□□ -2.16
MSH5YDL154W SMA2Q04658 369 aa1.58□□□□□ -2.16
MSH5YDL154W YPR022CQ12139 1133 aa1.58□□□□□ -2.16
MSH5YDL154W AYT1Q12226 474 aa1.58□□□□□ -2.16
MSH5YDL154W FRE6Q12473 712 aa1.58□□□□□ -2.16
MSH5YDL154W YPT1P01123 206 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W RPL15AP05748 204 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W ATR1P13090 542 aa1.58□□□□□ -2.16
MSH5YDL154W SLY1P22213 666 aa1.58□□□□□ -2.16
MSH5YDL154W LSB5P25369 354 aa1.58□□□□□ -2.16
MSH5YDL154W SMY1P32364 656 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W KKQ8P36004 724 aa1.58□□□□□ -2.16
MSH5YDL154W YPT35P38815 214 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W MNL1P38888 796 aa1.58□□□□□ -2.16
MSH5YDL154W YER079WP40052 210 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W PHO86P46956 311 aa1.58□□□□□ -2.16
MSH5YDL154W GOR1P53839 350 aa1.58□□□□□ -2.16
MSH5YDL154W RSN1Q03516 953 aa1.58□□□□□ -2.16
MSH5YDL154W TAF12Q03761 539 aa1.58□□□□□ -2.16
MSH5YDL154W ERP1Q05359 219 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W RKM1Q08961 583 aaPredicted RBP1.58□□□□□ -2.16
MSH5YDL154W ACC1Q00955 2233 aaKnown RBP1.58□□□□□ -2.16
MSH5YDL154W RPL1AP0CX43 217 aaKnown RBP1.57□□□□□ -2.16
MSH5YDL154W RPL1BP0CX44 217 aaKnown RBP1.57□□□□□ -2.16
MSH5YDL154W CDC23P16522 626 aa1.57□□□□□ -2.16
MSH5YDL154W MCK1P21965 375 aaKnown RBP1.57□□□□□ -2.16
MSH5YDL154W RRP7P25368 297 aaPredicted RBP1.57□□□□□ -2.16
MSH5YDL154W PUP2P32379 260 aa1.57□□□□□ -2.16
MSH5YDL154W COX13P32799 129 aa1.57□□□□□ -2.16
MSH5YDL154W CAB3P36076 571 aa1.57□□□□□ -2.16
MSH5YDL154W MTC6P38849 526 aa1.57□□□□□ -2.16
MSH5YDL154W RPR2P40571 144 aa1.57□□□□□ -2.16
MSH5YDL154W ROG1P53118 685 aa1.57□□□□□ -2.16
MSH5YDL154W MMT1Q03218 510 aa1.57□□□□□ -2.16
MSH5YDL154W YMR317WQ04893 1140 aa1.57□□□□□ -2.16
MSH5YDL154W UAF30Q08747 228 aa1.57□□□□□ -2.16
MSH5YDL154W SNX3Q08826 162 aaKnown RBP1.57□□□□□ -2.16
MSH5YDL154W NFI1Q12216 726 aa1.57□□□□□ -2.16
MSH5YDL154W RUP1Q12242 671 aa1.57□□□□□ -2.16
MSH5YDL154W RRD2Q12461 358 aa1.57□□□□□ -2.16
MSH5YDL154W HEM2P05373 342 aa1.57□□□□□ -2.16
MSH5YDL154W PHO84P25297 587 aaKnown RBP1.57□□□□□ -2.16
MSH5YDL154W YCR022CP25620 114 aa1.57□□□□□ -2.16
MSH5YDL154W MUD1P32605 298 aaKnown RBP1.57□□□□□ -2.16
MSH5YDL154W NRP1P32770 719 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
MSH5YDL154W YIP5P53108 310 aa1.57□□□□□ -2.16
MSH5YDL154W STD1Q02794 444 aa1.57□□□□□ -2.16
MSH5YDL154W YDR541CQ03049 344 aa1.57□□□□□ -2.16
MSH5YDL154W MDM30Q05930 598 aa1.57□□□□□ -2.16
MSH5YDL154W SMF3Q12078 473 aaPredicted RBP1.57□□□□□ -2.16
MSH5YDL154W ORT1Q12375 292 aa1.57□□□□□ -2.16
MSH5YDL154W SEC63P14906 663 aa1.56□□□□□ -2.16
MSH5YDL154W SNT1P25357 1226 aa1.56□□□□□ -2.16
MSH5YDL154W SEC1P30619 724 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W AGA1P32323 725 aa1.56□□□□□ -2.16
MSH5YDL154W SMI1P32566 505 aa1.56□□□□□ -2.16
MSH5YDL154W YBL028CP38202 106 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms