RNA–Protein interactions for RNA: YCR024C-A

PMP1, Transcript of Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p, yeast

Gene PMP1, Length 123 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMP1	YCR024C-A	YJL055W	P47044	245 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	AIM24	P47127	394 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	ROG1	P53118	685 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	RSC1	P53236	928 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	RRP46	P53256	223 aa	Predicted RBP	0.84	□□□□□ -2.27
PMP1	YCR024C-A	YGR250C	P53316	781 aa	Known RBP	0.84	□□□□□ -2.27
PMP1	YCR024C-A	MTQ1	P53944	314 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	GPI15	P53961	229 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	DIA1	P54005	336 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	SPR6	Q01684	191 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	STD1	Q02794	444 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	ERO1	Q03103	563 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	YMR010W	Q03687	405 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	PRP42	Q03776	544 aa	Known RBP	0.84	□□□□□ -2.27
PMP1	YCR024C-A	MDM30	Q05930	598 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	MMR1	Q06324	491 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	FDH1	Q08911	376 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	RKM1	Q08961	583 aa	Predicted RBP	0.84	□□□□□ -2.27
PMP1	YCR024C-A	TPT1	Q12272	230 aa	Known RBP	0.84	□□□□□ -2.27
PMP1	YCR024C-A	NCA2	Q12374	616 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	RRD2	Q12461	358 aa		0.84	□□□□□ -2.27
PMP1	YCR024C-A	TRP1	P00912	224 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	ADE4	P04046	510 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	RPL6B	P05739	176 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	ILV5	P06168	395 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	PIS1	P06197	220 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	NFT1	P0CE68	1218 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	ARO3	P14843	370 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	ALG1	P16661	449 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	PHO91	P27514	894 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	POP5	P28005	173 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	HSP104	P31539	908 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	MDL1	P33310	695 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	SKN1	P33336	771 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	DOA1	P36037	715 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	KAP104	P38217	918 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	OLA1	P38219	394 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	ECM8	P38246	354 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	WSS1	P38838	269 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	SER3	P40054	469 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	GAT2	P40209	560 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	ATM1	P40416	690 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	VHS2	P40463	436 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	LCB2	P40970	561 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	YFR057W	P43625	151 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	TOS3	P43637	560 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	SFH5	P47008	294 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	MDE1	P47095	244 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	YJR085C	P47131	105 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	TCB2	P48231	1178 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	YML6	P51998	286 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	MTM1	P53320	366 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	TRM112	P53738	135 aa	Predicted RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	VPS9	P54787	451 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	RPL6A	Q02326	176 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	YMR102C	Q03177	834 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	TAF12	Q03761	539 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	YDR131C	Q03899	556 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	BCH1	Q05029	724 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	LIP2	Q06005	328 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	RRP9	Q06506	573 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	IRC25	Q07951	179 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	SPE3	Q12074	293 aa	Known RBP	0.83	□□□□□ -2.28
PMP1	YCR024C-A	ATG34	Q12292	412 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	YDR061W	Q12298	539 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	CEX1	Q12453	761 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	RMD5	Q12508	421 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	ISN1	Q99312	450 aa		0.83	□□□□□ -2.28
PMP1	YCR024C-A	TPK3	P05986	398 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	IMA3	P0CW40	589 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	IMA4	P0CW41	589 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	RPS8A	P0CX39	200 aa	Known RBP	0.82	□□□□□ -2.28
PMP1	YCR024C-A	RPS8B	P0CX40	200 aa	Known RBP	0.82	□□□□□ -2.28
PMP1	YCR024C-A	ARF1	P11076	181 aa	Known RBP	0.82	□□□□□ -2.28
PMP1	YCR024C-A	EXG1	P23776	448 aa	Known RBP	0.82	□□□□□ -2.28
PMP1	YCR024C-A	IME2	P32581	645 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
PMP1	YCR024C-A	FMT1	P32785	401 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	YSC83	P32792	385 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	CSE2	P33308	149 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	LTV1	P34078	463 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	SPT10	P35208	640 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	YBL028C	P38202	106 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	PFF1	P38244	976 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	INM1	P38710	295 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	MNL1	P38888	796 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	YAL037W	P39728	267 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	YNL208W	P40159	199 aa	Known RBP	0.82	□□□□□ -2.28
PMP1	YCR024C-A	JLP2	P40206	208 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	EFM4	P40516	257 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	GAB1	P41733	394 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	EPL1	P43572	832 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	LCB3	P47013	409 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	BIR1	P47134	954 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	MRM2	P53123	320 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	YLR345W	Q06137	509 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	ECM7	Q06200	448 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	LOT6	Q07923	191 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	SMC5	Q08204	1093 aa		0.82	□□□□□ -2.28
PMP1	YCR024C-A	IMA2	Q08295	589 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms