RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W SGV1P23293 657 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W DPB2P24482 689 aaPredicted RBP3.26□□□□□ -1.89
NUP60YAR002W PHO84P25297 587 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W CTR86P25355 563 aa3.26□□□□□ -1.89
NUP60YAR002W RFA2P26754 273 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W UBC8P28263 218 aa3.26□□□□□ -1.89
NUP60YAR002W NTG1P31378 399 aa3.26□□□□□ -1.89
NUP60YAR002W SAC1P32368 623 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W PMT1P33775 817 aa3.26□□□□□ -1.89
NUP60YAR002W LHS1P36016 881 aa3.26□□□□□ -1.89
NUP60YAR002W GMH1P36125 273 aa3.26□□□□□ -1.89
NUP60YAR002W RPF2P36160 344 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W YBR071WP38243 211 aa3.26□□□□□ -1.89
NUP60YAR002W IML3P38265 245 aa3.26□□□□□ -1.89
NUP60YAR002W YBR138CP38277 524 aa3.26□□□□□ -1.89
NUP60YAR002W INM1P38710 295 aa3.26□□□□□ -1.89
NUP60YAR002W YJL070CP40361 888 aa3.26□□□□□ -1.89
NUP60YAR002W GCN20P43535 752 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W RET2P43621 546 aa3.26□□□□□ -1.89
NUP60YAR002W YJR030CP47101 745 aa3.26□□□□□ -1.89
NUP60YAR002W YJR149WP47177 404 aa3.26□□□□□ -1.89
NUP60YAR002W MDM34P53083 459 aa3.26□□□□□ -1.89
NUP60YAR002W GPG1P53130 126 aa3.26□□□□□ -1.89
NUP60YAR002W MPS2P53159 387 aa3.26□□□□□ -1.89
NUP60YAR002W COG7P53195 279 aa3.26□□□□□ -1.89
NUP60YAR002W ARE2P53629 642 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W YNL140CP53910 189 aa3.26□□□□□ -1.89
NUP60YAR002W ARX1Q03862 593 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W MFG1Q07684 458 aa3.26□□□□□ -1.89
NUP60YAR002W YOL131WQ08270 108 aa3.26□□□□□ -1.89
NUP60YAR002W RSA1Q08932 381 aa3.26□□□□□ -1.89
NUP60YAR002W VIK1Q12045 647 aa3.26□□□□□ -1.89
NUP60YAR002W RPN5Q12250 445 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W YPR011CQ12251 326 aa3.26□□□□□ -1.89
NUP60YAR002W PDH1Q12428 516 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W AHC1Q12433 566 aa3.26□□□□□ -1.89
NUP60YAR002W LAS17Q12446 633 aa3.26□□□□□ -1.89
NUP60YAR002W MHF2Q3E829 80 aa3.26□□□□□ -1.89
NUP60YAR002W Q0010Q9ZZX9 128 aa3.26□□□□□ -1.89
NUP60YAR002W UBR1P19812 1950 aa3.25□□□□□ -1.89
NUP60YAR002W FUM1P08417 488 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W UNG1P12887 359 aa3.25□□□□□ -1.89
NUP60YAR002W RPS5P26783 225 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W HXT4P32467 576 aa3.25□□□□□ -1.89
NUP60YAR002W SEC17P32602 292 aa3.25□□□□□ -1.89
NUP60YAR002W TFB1P32776 642 aa3.25□□□□□ -1.89
NUP60YAR002W RIB1P38066 345 aa3.25□□□□□ -1.89
NUP60YAR002W COS111P38308 924 aa3.25□□□□□ -1.89
NUP60YAR002W GOS1P38736 223 aa3.25□□□□□ -1.89
NUP60YAR002W YHR127WP38833 243 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W ATG7P38862 630 aa3.25□□□□□ -1.89
NUP60YAR002W HXT6P39003 570 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W HXT7P39004 570 aa3.25□□□□□ -1.89
NUP60YAR002W MNN9P39107 395 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W LSM5P40089 93 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W SER33P40510 469 aa3.25□□□□□ -1.89
NUP60YAR002W MSS2P40990 351 aa3.25□□□□□ -1.89
NUP60YAR002W ARF3P40994 183 aaRIP-Chip data3.25□□□□□ -1.89not detected
NUP60YAR002W GPP1P41277 250 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W GZF3P42944 551 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W YFR018CP43599 363 aa3.25□□□□□ -1.89
NUP60YAR002W TOM22P49334 152 aa3.25□□□□□ -1.89
NUP60YAR002W ATP22P50273 684 aaPredicted RBP3.25□□□□□ -1.89
NUP60YAR002W PHO23P50947 330 aa3.25□□□□□ -1.89
NUP60YAR002W ZRG17P53735 605 aa3.25□□□□□ -1.89
NUP60YAR002W AAT1Q01802 451 aa3.25□□□□□ -1.89
NUP60YAR002W GIP3Q03016 1276 aa3.25□□□□□ -1.89
NUP60YAR002W YMR099CQ03161 297 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W YMR034CQ05131 434 aaPredicted RBP3.25□□□□□ -1.89
NUP60YAR002W VPS74Q06385 345 aa3.25□□□□□ -1.89
NUP60YAR002W GRS2Q06817 618 aa3.25□□□□□ -1.89
NUP60YAR002W COS7Q07788 383 aa3.25□□□□□ -1.89
NUP60YAR002W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
NUP60YAR002W THP1Q08231 455 aa3.25□□□□□ -1.89
NUP60YAR002W YTM1Q12024 460 aaPredicted RBP3.25□□□□□ -1.89
NUP60YAR002W RGT2Q12300 763 aa3.25□□□□□ -1.89
NUP60YAR002W WTM1Q12363 437 aaKnown RBP3.25□□□□□ -1.89
NUP60YAR002W VCX1Q99385 411 aa3.25□□□□□ -1.89
NUP60YAR002W TIM9O74700 87 aa3.24□□□□□ -1.89
NUP60YAR002W TPK3P05986 398 aa3.24□□□□□ -1.89
NUP60YAR002W GPH1P06738 902 aaKnown RBP3.24□□□□□ -1.89
NUP60YAR002W MET3P08536 511 aa3.24□□□□□ -1.89
NUP60YAR002W GAL3P13045 520 aa3.24□□□□□ -1.89
NUP60YAR002W YSR3P23501 404 aa3.24□□□□□ -1.89
NUP60YAR002W SPO23P33757 523 aa3.24□□□□□ -1.89
NUP60YAR002W VPS21P36017 210 aaKnown RBP3.24□□□□□ -1.89
NUP60YAR002W APT2P36973 181 aa3.24□□□□□ -1.89
NUP60YAR002W ECM8P38246 354 aa3.24□□□□□ -1.89
NUP60YAR002W RCK1P38622 512 aa3.24□□□□□ -1.89
NUP60YAR002W MED6P38782 295 aa3.24□□□□□ -1.89
NUP60YAR002W SSZ1P38788 538 aaKnown RBP3.24□□□□□ -1.89
NUP60YAR002W APE4P38821 490 aa3.24□□□□□ -1.89
NUP60YAR002W MTG2P38860 518 aa3.24□□□□□ -1.89
NUP60YAR002W YEL073CP39974 107 aa3.24□□□□□ -1.89
NUP60YAR002W NDE1P40215 560 aa3.24□□□□□ -1.89
NUP60YAR002W FAR7P43592 221 aa3.24□□□□□ -1.89
NUP60YAR002W GOR1P53839 350 aa3.24□□□□□ -1.89
NUP60YAR002W IMP4P53941 290 aaKnown RBP3.24□□□□□ -1.89
NUP60YAR002W TGL2P54857 326 aa3.24□□□□□ -1.89
NUP60YAR002W SED5Q01590 340 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms