RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 WWM1P43582 211 aaKnown RBP7.46□□□□□ -1.22
NME1NME1 NCA3P46955 337 aa7.46□□□□□ -1.22
NME1NME1 URC2Q04411 772 aa7.46□□□□□ -1.22
NME1NME1 SMA2Q04658 369 aa7.46□□□□□ -1.22
NME1NME1 NCA2Q12374 616 aa7.46□□□□□ -1.22
NME1NME1 YMR230W-AQ3E7B5 62 aa7.46□□□□□ -1.22
NME1NME1 OPI3P05375 206 aa7.45□□□□□ -1.22
NME1NME1 ATP1P07251 545 aaKnown RBP7.45□□□□□ -1.22
NME1NME1 RPL12AP0CX53 165 aaKnown RBP7.45□□□□□ -1.22
NME1NME1 RPL12BP0CX54 165 aa7.45□□□□□ -1.22
NME1NME1 UBA1P22515 1024 aaKnown RBP7.45□□□□□ -1.22
NME1NME1 YCL068CP25593 260 aa7.45□□□□□ -1.22
NME1NME1 UIP5P36137 443 aa7.45□□□□□ -1.22
NME1NME1 SPP381P38282 291 aaPredicted RBP7.45□□□□□ -1.22
NME1NME1 TIF5P38431 405 aaKnown RBP7.45□□□□□ -1.22
NME1NME1 TOS3P43637 560 aa7.45□□□□□ -1.22
NME1NME1 DOA1P36037 715 aa7.44□□□□□ -1.22
NME1NME1 YBL028CP38202 106 aa7.44□□□□□ -1.22
NME1NME1 YBR137WP38276 179 aa7.44□□□□□ -1.22
NME1NME1 RRN11Q04712 507 aa7.44□□□□□ -1.22
NME1NME1 ARF1P11076 181 aaKnown RBP7.43□□□□□ -1.22
NME1NME1 VMA2P16140 517 aaKnown RBP7.43□□□□□ -1.22
NME1NME1 CHK1P38147 527 aa7.43□□□□□ -1.22
NME1NME1 ATM1P40416 690 aa7.43□□□□□ -1.22
NME1NME1 SIM1P40472 476 aa7.43□□□□□ -1.22
NME1NME1 YIL067CP40514 678 aa7.43□□□□□ -1.22
NME1NME1 CCE1Q03702 353 aa7.43□□□□□ -1.22
NME1NME1 RAX1Q08760 435 aa7.43□□□□□ -1.22
NME1NME1 NBL1Q3E7Y6 73 aa7.43□□□□□ -1.22
NME1NME1 SCH9P11792 824 aaKnown RBP7.42□□□□□ -1.22
NME1NME1 YKL097CP34245 136 aa7.42□□□□□ -1.22
NME1NME1 STE24P47154 453 aa7.42□□□□□ -1.22
NME1NME1 PMT5P52867 743 aa7.42□□□□□ -1.22
NME1NME1 CPR4P25334 318 aa7.41□□□□□ -1.22
NME1NME1 YEL043WP32618 956 aa7.41□□□□□ -1.22
NME1NME1 JLP2P40206 208 aa7.41□□□□□ -1.22
NME1NME1 RPA34P47006 233 aaPredicted RBP7.41□□□□□ -1.22
NME1NME1 NDE2Q07500 545 aa7.41□□□□□ -1.22
NME1NME1 TRX1P22217 103 aaKnown RBP7.4□□□□□ -1.22
NME1NME1 SDH3P33421 198 aa7.4□□□□□ -1.22
NME1NME1 SKT5P34226 696 aa7.4□□□□□ -1.22
NME1NME1 KRE9P39005 276 aa7.4□□□□□ -1.22
NME1NME1 SCS3P53012 380 aa7.4□□□□□ -1.22
NME1NME1 CUE3P53137 624 aaKnown RBP7.4□□□□□ -1.22
NME1NME1 YGR117CP53270 476 aa7.4□□□□□ -1.22
NME1NME1 YNR068CP53754 272 aa7.4□□□□□ -1.22
NME1NME1 AQR1P53943 586 aa7.4□□□□□ -1.22
NME1NME1 YER078W-AQ3E7A2 54 aa7.4□□□□□ -1.22
NME1NME1 TPK3P05986 398 aa7.39□□□□□ -1.23
NME1NME1 PRM5P40476 318 aa7.39□□□□□ -1.23
NME1NME1 FYV8P46949 817 aaKnown RBP7.39□□□□□ -1.23
NME1NME1 YNL143CP53908 130 aa7.39□□□□□ -1.23
NME1NME1 SPR6Q01684 191 aa7.39□□□□□ -1.23
NME1NME1 PSY3Q12318 242 aa7.39□□□□□ -1.23
NME1NME1 SPT10P35208 640 aa7.38□□□□□ -1.23
NME1NME1 YHR218WP38899 603 aa7.38□□□□□ -1.23
NME1NME1 RTT103Q05543 409 aa7.38□□□□□ -1.23
NME1NME1 ASA1Q06822 443 aa7.38□□□□□ -1.23
NME1NME1 PML1Q07930 204 aaPredicted RBP7.38□□□□□ -1.23
NME1NME1 POM152P39685 1337 aa7.37□□□□□ -1.23
NME1NME1 PHO2P07269 559 aa7.37□□□□□ -1.23
NME1NME1 CAP2P13517 287 aa7.37□□□□□ -1.23
NME1NME1 EXG1P23776 448 aaKnown RBP7.37□□□□□ -1.23
NME1NME1 RDS1P25611 832 aa7.37□□□□□ -1.23
NME1NME1 PSO2P30620 661 aa7.37□□□□□ -1.23
NME1NME1 YHR177WP38867 453 aa7.37□□□□□ -1.23
NME1NME1 PDR16P53860 351 aaKnown RBP7.37□□□□□ -1.23
NME1NME1 UTP6Q02354 440 aaKnown RBP7.37□□□□□ -1.23
NME1NME1 HER2Q03557 464 aa7.37□□□□□ -1.23
NME1NME1 TSR1Q07381 788 aaKnown RBP7.37□□□□□ -1.23
NME1NME1 NOP6Q07623 225 aaKnown RBP7.37□□□□□ -1.23
NME1NME1 LDS2Q08218 356 aa7.37□□□□□ -1.23
NME1NME1 PEX27Q08580 376 aa7.37□□□□□ -1.23
NME1NME1 CPR3P25719 182 aa7.36□□□□□ -1.23
NME1NME1 YEF1P32622 495 aa7.36□□□□□ -1.23
NME1NME1 COX14P39103 70 aa7.36□□□□□ -1.23
NME1NME1 YIL089WP40500 205 aa7.36□□□□□ -1.23
NME1NME1 RRP46P53256 223 aaPredicted RBP7.36□□□□□ -1.23
NME1NME1 PBA1Q05778 276 aa7.36□□□□□ -1.23
NME1NME1 TRP1P00912 224 aa7.35□□□□□ -1.23
NME1NME1 HHF1P02309 103 aaKnown RBP7.35□□□□□ -1.23
NME1NME1 YUR1P26725 428 aa7.35□□□□□ -1.23
NME1NME1 YBL059WP34224 193 aa7.35□□□□□ -1.23
NME1NME1 POP2P39008 433 aa7.35□□□□□ -1.23
NME1NME1 YOP1Q12402 180 aa7.35□□□□□ -1.23
NME1NME1 PAB1P04147 577 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
NME1NME1 TAL1P15019 335 aaKnown RBP7.34□□□□□ -1.23
NME1NME1 TOS2P50078 622 aa7.34□□□□□ -1.23
NME1NME1 MPS2P53159 387 aa7.34□□□□□ -1.23
NME1NME1 YRM1Q12340 786 aa7.34□□□□□ -1.23
NME1NME1 MSG5P38590 489 aa7.33□□□□□ -1.24
NME1NME1 NDT80P38830 627 aa7.33□□□□□ -1.24
NME1NME1 YIL029CP40538 142 aa7.33□□□□□ -1.24
NME1NME1 NAS2P40555 220 aa7.33□□□□□ -1.24
NME1NME1 SFG1Q12507 346 aa7.33□□□□□ -1.24
NME1NME1 STF1P01098 86 aa7.32□□□□□ -1.24
NME1NME1 RNA1P11745 407 aaKnown RBP7.32□□□□□ -1.24
NME1NME1 SPT15P13393 240 aaKnown RBP7.32□□□□□ -1.24
NME1NME1 DEG1P31115 442 aaKnown RBP7.32□□□□□ -1.24
NME1NME1 PAD1P33751 242 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms