RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SH2B2O14492 632 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-215ENST00000485550 MBTPS2O43462 519 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 ST18O60284 1047 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 DDAH1O94760 285 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 TGFB3P10600 412 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 KIF5BP33176 963 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 SP4Q02446 784 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 COL19A1Q14993 1142 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 SMAD2Q15796 467 aaKnown RBP12.18□□□□□ -0.46
HMGN1-215ENST00000485550 GNPTABQ3T906 1256 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 HERC4Q5GLZ8 1057 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-215ENST00000485550 CREB3L3Q68CJ9 461 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 CUL5Q93034 780 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 C16orf70Q9BSU1 422 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
HMGN1-215ENST00000485550 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
HMGN1-215ENST00000485550 COL4A6Q14031 1691 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 TTC3P53804 2025 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 FAM186AA6NE01 2351 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 SPATA31C2B4DYI2 1134 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 NOP56O00567 594 aaKnown RBP12.17□□□□□ -0.46
HMGN1-215ENST00000485550 MEIS2O14770 477 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 LGALS2P05162 132 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 HOXD8P13378 290 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-215ENST00000485550 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
HMGN1-215ENST00000485550 THPOP40225 353 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 PTPN5P54829 565 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 SEMA3FQ13275 785 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 NECTIN1Q15223 517 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 UTP14CQ5TAP6 766 aaKnown RBP12.17□□□□□ -0.46
HMGN1-215ENST00000485550 TMTC2Q8N394 836 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 TOP1MTQ969P6 601 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 PBXIP1Q96AQ6 731 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 TMEM87BQ96K49 555 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 SPZ1Q9BXG8 430 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 OSBPL7Q9BZF2 842 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 FAM86C1Q9NVL1 165 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 SLC12A7Q9Y666 1083 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 RIF1Q5UIP0 2472 aaKnown RBP12.17□□□□□ -0.46
HMGN1-215ENST00000485550 PLXNA4Q9HCM2 1894 aa12.17□□□□□ -0.46
HMGN1-215ENST00000485550 BAZ2BQ9UIF8 2168 aaKnown RBP12.16□□□□□ -0.46
HMGN1-215ENST00000485550 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 C17orf102A2RUQ5 167 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 H3BRB1 525 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 SMIM10L2AP0DMW4 78 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 SMIM10L2BP0DMW5 78 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 ICAM3P32942 547 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 GNAQP50148 359 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 HYAL1Q12794 435 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 TCF15Q12870 199 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 NEDD9Q14511 834 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 UBE2SQ16763 222 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 PLEKHG4Q58EX7 1191 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 EDAQ92838 391 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 ATP6V0A1Q93050 837 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 TCEANC2Q96MN5 208 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-215ENST00000485550 LZTS2Q9BRK4 669 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
HMGN1-215ENST00000485550 TUT1Q9H6E5 874 aaKnown RBP12.16□□□□□ -0.46
HMGN1-215ENST00000485550 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-215ENST00000485550 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 M0R296 226 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 STXBP3O00186 592 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 GRM6O15303 877 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 LINC01565O15544 149 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 TREHO43280 583 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 FIBPO43427 364 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 TBX10O75333 385 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 CTSHP09668 335 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 CTNNB1P35222 781 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 LIFRP42702 1097 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 METTL7BQ6UX53 244 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 TRIM50Q86XT4 487 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 POP1Q99575 1024 aaKnown RBP12.15□□□□□ -0.46
HMGN1-215ENST00000485550 GPR20Q99678 358 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 IFIH1Q9BYX4 1025 aaKnown RBP12.15□□□□□ -0.46
HMGN1-215ENST00000485550 PSTPIP2Q9H939 334 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 SETD4Q9NVD3 440 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 LAMA4Q16363 1823 aa12.15□□□□□ -0.46
HMGN1-215ENST00000485550 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 NCK2O43639 380 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 GFRA3O60609 400 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 ATP9AO75110 1047 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 STAM2O75886 525 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 CALM1P0DP23 149 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 CALM2P0DP24 149 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 CALM3P0DP25 149 aa12.14□□□□□ -0.47
HMGN1-215ENST00000485550 SMAD4Q13485 552 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms