RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C GPM3Q12326 303 aa3.14□□□□□ -1.91
CUP9YPL177C RPS8AP0CX39 200 aaKnown RBP3.13□□□□□ -1.91
CUP9YPL177C RPS8BP0CX40 200 aaKnown RBP3.13□□□□□ -1.91
CUP9YPL177C MUD1P32605 298 aaKnown RBP3.13□□□□□ -1.91
CUP9YPL177C ASC1P38011 319 aaKnown RBP3.13□□□□□ -1.91
CUP9YPL177C SWD3P38123 315 aa3.13□□□□□ -1.91
CUP9YPL177C ZTA1P38230 334 aaKnown RBP3.13□□□□□ -1.91
CUP9YPL177C VHS2P40463 436 aa3.13□□□□□ -1.91
CUP9YPL177C TOM22P49334 152 aa3.13□□□□□ -1.91
CUP9YPL177C YGR111WP53265 400 aa3.13□□□□□ -1.91
CUP9YPL177C MTM1P53320 366 aa3.13□□□□□ -1.91
CUP9YPL177C GYL1Q04322 720 aa3.13□□□□□ -1.91
CUP9YPL177C SRL2Q12020 392 aa3.13□□□□□ -1.91
CUP9YPL177C AEP3Q12089 606 aa3.13□□□□□ -1.91
CUP9YPL177C MED2Q12124 431 aa3.13□□□□□ -1.91
CUP9YPL177C BUG1Q12191 341 aa3.13□□□□□ -1.91
CUP9YPL177C CYC3P06182 269 aa3.12□□□□□ -1.91
CUP9YPL177C CLN3P13365 580 aa3.12□□□□□ -1.91
CUP9YPL177C LDB16P25587 256 aa3.12□□□□□ -1.91
CUP9YPL177C NIP1P32497 812 aaKnown RBP3.12□□□□□ -1.91
CUP9YPL177C PXA2P34230 853 aa3.12□□□□□ -1.91
CUP9YPL177C FAD1P38913 306 aa3.12□□□□□ -1.91
CUP9YPL177C PCF11P39081 626 aaPredicted RBP3.12□□□□□ -1.91
CUP9YPL177C REE1P40893 198 aa3.12□□□□□ -1.91
CUP9YPL177C YGR210CP42942 411 aa3.12□□□□□ -1.91
CUP9YPL177C YGL242CP53066 181 aa3.12□□□□□ -1.91
CUP9YPL177C URH1Q04179 340 aa3.12□□□□□ -1.91
CUP9YPL177C UAF30Q08747 228 aa3.12□□□□□ -1.91
CUP9YPL177C ADH2P00331 348 aaKnown RBP3.11□□□□□ -1.91
CUP9YPL177C NFT1P0CE68 1218 aa3.11□□□□□ -1.91
CUP9YPL177C YBR056WP38081 501 aa3.11□□□□□ -1.91
CUP9YPL177C MSG5P38590 489 aa3.11□□□□□ -1.91
CUP9YPL177C YML6P51998 286 aa3.11□□□□□ -1.91
CUP9YPL177C HER2Q03557 464 aa3.11□□□□□ -1.91
CUP9YPL177C HRI1Q05905 244 aaKnown RBP3.11□□□□□ -1.91
CUP9YPL177C YLR456WQ06199 204 aa3.11□□□□□ -1.91
CUP9YPL177C DCI1Q08558 271 aa3.11□□□□□ -1.91
CUP9YPL177C ATG34Q12292 412 aa3.11□□□□□ -1.91
CUP9YPL177C YRM1Q12340 786 aa3.11□□□□□ -1.91
CUP9YPL177C CDC60P26637 1090 aaKnown RBP3.1□□□□□ -1.91
CUP9YPL177C ARO2P28777 376 aaKnown RBP3.1□□□□□ -1.91
CUP9YPL177C RIM1P32445 135 aaKnown RBP3.1□□□□□ -1.91
CUP9YPL177C MNS1P32906 549 aa3.1□□□□□ -1.91
CUP9YPL177C YKL097CP34245 136 aa3.1□□□□□ -1.91
CUP9YPL177C JLP2P40206 208 aa3.1□□□□□ -1.91
CUP9YPL177C GAT2P40209 560 aa3.1□□□□□ -1.91
CUP9YPL177C PAN6P40459 309 aa3.1□□□□□ -1.91
CUP9YPL177C YPS6P40583 537 aa3.1□□□□□ -1.91
CUP9YPL177C SFH5P47008 294 aa3.1□□□□□ -1.91
CUP9YPL177C CWC25P53854 179 aaKnown RBP3.1□□□□□ -1.91
CUP9YPL177C RHO5P53879 331 aaKnown RBP3.1□□□□□ -1.91
CUP9YPL177C CIK1Q01649 594 aa3.1□□□□□ -1.91
CUP9YPL177C BCH1Q05029 724 aa3.1□□□□□ -1.91
CUP9YPL177C PET123P17558 318 aa3.09□□□□□ -1.91
CUP9YPL177C DAL2P25335 343 aa3.09□□□□□ -1.91
CUP9YPL177C CYS4P32582 507 aaKnown RBP3.09□□□□□ -1.91
CUP9YPL177C STP2P38704 541 aa3.09□□□□□ -1.91
CUP9YPL177C CHS6P40955 746 aa3.09□□□□□ -1.91
CUP9YPL177C LCB2P40970 561 aa3.09□□□□□ -1.91
CUP9YPL177C BTN2P53286 410 aa3.09□□□□□ -1.91
CUP9YPL177C STD1Q02794 444 aa3.09□□□□□ -1.91
CUP9YPL177C PRP42Q03776 544 aaKnown RBP3.09□□□□□ -1.91
CUP9YPL177C RPN9Q04062 393 aaKnown RBP3.09□□□□□ -1.91
CUP9YPL177C RRP9Q06506 573 aaKnown RBP3.09□□□□□ -1.91
CUP9YPL177C RRG7Q08774 242 aaPredicted RBP3.09□□□□□ -1.91
CUP9YPL177C HRT3Q12347 344 aa3.09□□□□□ -1.91
CUP9YPL177C YEL045CP32616 141 aa3.08□□□□□ -1.92
CUP9YPL177C LTV1P34078 463 aa3.08□□□□□ -1.92
CUP9YPL177C CHK1P38147 527 aa3.08□□□□□ -1.92
CUP9YPL177C GPI16P38875 610 aa3.08□□□□□ -1.92
CUP9YPL177C STN1P38960 494 aa3.08□□□□□ -1.92
CUP9YPL177C YER079WP40052 210 aaKnown RBP3.08□□□□□ -1.92
CUP9YPL177C SIM1P40472 476 aa3.08□□□□□ -1.92
CUP9YPL177C EFM4P40516 257 aa3.08□□□□□ -1.92
CUP9YPL177C BUD27P43573 796 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
CUP9YPL177C PIB2P53191 635 aa3.08□□□□□ -1.92
CUP9YPL177C SPE3Q12074 293 aaKnown RBP3.08□□□□□ -1.92
CUP9YPL177C MNE1P24720 663 aa3.07□□□□□ -1.92
CUP9YPL177C YCL068CP25593 260 aa3.07□□□□□ -1.92
CUP9YPL177C POP5P28005 173 aa3.07□□□□□ -1.92
CUP9YPL177C KAR9P32526 644 aa3.07□□□□□ -1.92
CUP9YPL177C OLA1P38219 394 aaKnown RBP3.07□□□□□ -1.92
CUP9YPL177C YHR131CP38835 850 aa3.07□□□□□ -1.92
CUP9YPL177C NUP116Q02630 1113 aa3.07□□□□□ -1.92
CUP9YPL177C MMT1Q03218 510 aa3.07□□□□□ -1.92
CUP9YPL177C CCE1Q03702 353 aa3.07□□□□□ -1.92
CUP9YPL177C TPT1Q12272 230 aaKnown RBP3.07□□□□□ -1.92
CUP9YPL177C CDC21P06785 304 aa3.06□□□□□ -1.92
CUP9YPL177C DST1P07273 309 aa3.06□□□□□ -1.92
CUP9YPL177C ALG1P16661 449 aa3.06□□□□□ -1.92
CUP9YPL177C ISY1P21374 235 aaPredicted RBP3.06□□□□□ -1.92
CUP9YPL177C ATP3P38077 311 aaKnown RBP3.06□□□□□ -1.92
CUP9YPL177C INM1P38710 295 aa3.06□□□□□ -1.92
CUP9YPL177C LRP1P38801 184 aaKnown RBP3.06□□□□□ -1.92
CUP9YPL177C SBE22P38814 852 aa3.06□□□□□ -1.92
CUP9YPL177C PRE5P40302 234 aaKnown RBP3.06□□□□□ -1.92
CUP9YPL177C TMC1Q08422 150 aaPredicted RBP3.06□□□□□ -1.92
CUP9YPL177C RPN5Q12250 445 aaKnown RBP3.06□□□□□ -1.92
CUP9YPL177C NCA2Q12374 616 aa3.06□□□□□ -1.92
CUP9YPL177C PAR32Q12515 295 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms