RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	NFT1	P0CE68	1218 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	YMR085W	P0CF18	432 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	KRS1	P15180	591 aa	Known RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	DAL2	P25335	343 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	HXT1	P32465	570 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	YSC83	P32792	385 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	IML3	P38265	245 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	VHC1	P38329	1120 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	TSC10	P38342	320 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	MBB1	P39534	108 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	TFG2	P41896	400 aa	Predicted RBP	5.19	□□□□□ -1.58
NUP1	YOR098C	MIC19	P43594	170 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	BUD17	P53727	317 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	YNL146W	P53906	100 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	ERG5	P54781	538 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	URH1	Q04179	340 aa		5.19	□□□□□ -1.58
NUP1	YOR098C	ARG4	P04076	463 aa	Predicted RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	RPL24A	P04449	155 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	RPP2A	P05319	106 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	CDC6	P09119	513 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	SAR1	P20606	190 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	APA2	P22108	325 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	MET22	P32179	357 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	ECM25	P32525	599 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	ZUO1	P32527	433 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	ADE17	P38009	592 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	YHR182W	P38870	785 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	PLB1	P39105	664 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	RIO2	P40160	425 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	CDC40	P40968	455 aa	Predicted RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	HSH155	P49955	971 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	YMR310C	Q04867	317 aa	Predicted RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	TGS1	Q12052	315 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	RHB1	P25378	209 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	YCR016W	P25617	290 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	SIN4	P32259	974 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	ECT1	P33412	323 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	QDR3	P38227	689 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	UTP18	P40362	594 aa	Predicted RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	YIR042C	P40586	236 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	YJR079W	P47126	109 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	DSL1	P53847	754 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	RPS10A	Q08745	105 aa	Predicted RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	RDR1	Q08904	546 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	ABF1	P14164	731 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	SGV1	P23293	657 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	FUB1	P25659	250 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	KAP104	P38217	918 aa	Known RBP	5.18	□□□□□ -1.58
NUP1	YOR098C	FMC1	P40491	155 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	YJL118W	P47022	219 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	COX20	Q04935	205 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	SMC5	Q08204	1093 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	LCB4	Q12246	624 aa		5.18	□□□□□ -1.58
NUP1	YOR098C	MSF1	P08425	469 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	CDC23	P16522	626 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	CWP1	P28319	239 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	PRO3	P32263	286 aa	Known RBP	5.17	□□□□□ -1.58
NUP1	YOR098C	YIP4	P53093	235 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	RLI1	Q03195	608 aa	Known RBP	5.17	□□□□□ -1.58
NUP1	YOR098C	CMS1	Q07897	291 aa	Known RBP	5.17	□□□□□ -1.58
NUP1	YOR098C	ADE4	P04046	510 aa	Known RBP	5.17	□□□□□ -1.58
NUP1	YOR098C	MAS1	P10507	462 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	SEC63	P14906	663 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	POL30	P15873	258 aa	Known RBP	5.17	□□□□□ -1.58
NUP1	YOR098C	PHO13	P19881	312 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	OSM1	P21375	501 aa	Known RBP	5.17	□□□□□ -1.58
NUP1	YOR098C	KAR4	P25583	335 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected
NUP1	YOR098C	PPS1	P38148	807 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	YBR053C	P38235	358 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	FMP33	P46998	180 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	YNL260C	P53846	198 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	PEX27	Q08580	376 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	MLH3	Q12083	715 aa		5.17	□□□□□ -1.58
NUP1	YOR098C	PMA1	P05030	918 aa	Known RBP	5.16	□□□□□ -1.58
NUP1	YOR098C	RHO2	P06781	192 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	OCT1	P35999	772 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	SPC97	P38863	823 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	SPG5	P42933	373 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	YNL247W	P53852	767 aa	Known RBP	5.16	□□□□□ -1.58
NUP1	YOR098C	ESBP6	P53918	673 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	ATG31	Q12421	196 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	CHO2	P05374	869 aa	Known RBP	5.16	□□□□□ -1.58
NUP1	YOR098C	ACP1	P32463	125 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	GDA1	P32621	518 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	CYM1	P32898	989 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	ANS1	P38832	159 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	PRP39	P39682	629 aa	Known RBP	5.16	□□□□□ -1.58
NUP1	YOR098C	PHM8	P40025	321 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	MAL13	P53338	473 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	TAF12	Q03761	539 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	BTS1	Q12051	335 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	RMD5	Q12508	421 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	RAP1	P11938	827 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	ITR1	P30605	584 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	RRP4	P38792	359 aa	Known RBP	5.16	□□□□□ -1.58
NUP1	YOR098C	SBE22	P38814	852 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	RPS10B	P46784	105 aa	Known RBP	5.16	□□□□□ -1.58
NUP1	YOR098C	JJJ3	P47138	172 aa		5.16	□□□□□ -1.58
NUP1	YOR098C	VPS62	P53285	467 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms