RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W ADA2Q02336 434 aa2.17□□□□□ -2.06
DDR48YMR173W NUP116Q02630 1113 aa2.17□□□□□ -2.06
DDR48YMR173W URH1Q04179 340 aa2.17□□□□□ -2.06
DDR48YMR173W RIF2Q06208 395 aa2.17□□□□□ -2.06
DDR48YMR173W YPQ1Q12010 308 aa2.17□□□□□ -2.06
DDR48YMR173W BUG1Q12191 341 aa2.17□□□□□ -2.06
DDR48YMR173W YGK3Q12222 375 aaPredicted RBP2.17□□□□□ -2.06
DDR48YMR173W VAM3Q12241 283 aa2.17□□□□□ -2.06
DDR48YMR173W ATG34Q12292 412 aa2.17□□□□□ -2.06
DDR48YMR173W PSK1P31374 1356 aa2.16□□□□□ -2.06
DDR48YMR173W CBP6P07253 162 aaPredicted RBP2.16□□□□□ -2.06
DDR48YMR173W RPL3P14126 387 aaKnown RBP2.16□□□□□ -2.06
DDR48YMR173W BEM1P29366 551 aa2.16□□□□□ -2.06
DDR48YMR173W SOR1P35497 357 aaKnown RBP2.16□□□□□ -2.06
DDR48YMR173W CHK1P38147 527 aa2.16□□□□□ -2.06
DDR48YMR173W OM14P38325 134 aa2.16□□□□□ -2.06
DDR48YMR173W RRP4P38792 359 aaKnown RBP2.16□□□□□ -2.06
DDR48YMR173W CHS6P40955 746 aa2.16□□□□□ -2.06
DDR48YMR173W YFR057WP43625 151 aa2.16□□□□□ -2.06
DDR48YMR173W PHO86P46956 311 aa2.16□□□□□ -2.06
DDR48YMR173W MST27P53176 234 aa2.16□□□□□ -2.06
DDR48YMR173W OAZ1Q02803 292 aa2.16□□□□□ -2.06
DDR48YMR173W GIP3Q03016 1276 aa2.16□□□□□ -2.06
DDR48YMR173W ECM11Q04110 302 aa2.16□□□□□ -2.06
DDR48YMR173W MDM36Q06820 579 aa2.16□□□□□ -2.06
DDR48YMR173W SOR2Q07786 357 aa2.16□□□□□ -2.06
DDR48YMR173W SMF3Q12078 473 aaPredicted RBP2.16□□□□□ -2.06
DDR48YMR173W CLN1P20437 546 aa2.15□□□□□ -2.07
DDR48YMR173W YCL068CP25593 260 aa2.15□□□□□ -2.07
DDR48YMR173W ANR2P36090 516 aaPredicted RBP2.15□□□□□ -2.07
DDR48YMR173W NTC20P38302 140 aaPredicted RBP2.15□□□□□ -2.07
DDR48YMR173W BAT1P38891 393 aaKnown RBP2.15□□□□□ -2.07
DDR48YMR173W COX14P39103 70 aa2.15□□□□□ -2.07
DDR48YMR173W PTI1P39927 425 aaPredicted RBP2.15□□□□□ -2.07
DDR48YMR173W BIR1P47134 954 aa2.15□□□□□ -2.07
DDR48YMR173W BNS1P50084 137 aa2.15□□□□□ -2.07
DDR48YMR173W AIM32Q04689 311 aa2.15□□□□□ -2.07
DDR48YMR173W YDL121CQ07541 149 aa2.15□□□□□ -2.07
DDR48YMR173W COX4P04037 155 aa2.14□□□□□ -2.07
DDR48YMR173W MET17P06106 444 aa2.14□□□□□ -2.07
DDR48YMR173W CYS4P32582 507 aaKnown RBP2.14□□□□□ -2.07
DDR48YMR173W YKL097CP34245 136 aa2.14□□□□□ -2.07
DDR48YMR173W OXA1P39952 402 aa2.14□□□□□ -2.07
DDR48YMR173W YER186CP40101 306 aa2.14□□□□□ -2.07
DDR48YMR173W ATG18P43601 500 aa2.14□□□□□ -2.07
DDR48YMR173W MRM2P53123 320 aa2.14□□□□□ -2.07
DDR48YMR173W SKO1Q02100 647 aa2.14□□□□□ -2.07
DDR48YMR173W MRPS16Q02608 121 aa2.14□□□□□ -2.07
DDR48YMR173W YET2Q04210 160 aa2.14□□□□□ -2.07
DDR48YMR173W RTN1Q04947 295 aaKnown RBP2.14□□□□□ -2.07
DDR48YMR173W ERG3P32353 365 aa2.13□□□□□ -2.07
DDR48YMR173W BMT2P38278 337 aa2.13□□□□□ -2.07
DDR48YMR173W PHB2P50085 310 aa2.13□□□□□ -2.07
DDR48YMR173W CLD1P53264 445 aa2.13□□□□□ -2.07
DDR48YMR173W MKC7P53379 596 aa2.13□□□□□ -2.07
DDR48YMR173W RRP9Q06506 573 aaKnown RBP2.13□□□□□ -2.07
DDR48YMR173W RTN2Q12443 393 aa2.13□□□□□ -2.07
DDR48YMR173W PGA3Q12746 312 aaKnown RBP2.13□□□□□ -2.07
DDR48YMR173W YOL159C-AQ3E769 90 aa2.13□□□□□ -2.07
DDR48YMR173W CLB3P24870 427 aa2.12□□□□□ -2.07
DDR48YMR173W CDC50P25656 391 aa2.12□□□□□ -2.07
DDR48YMR173W DPH2P32461 534 aa2.12□□□□□ -2.07
DDR48YMR173W YME2P32843 850 aa2.12□□□□□ -2.07
DDR48YMR173W RRN10P38204 145 aa2.12□□□□□ -2.07
DDR48YMR173W TIM17P39515 158 aa2.12□□□□□ -2.07
DDR48YMR173W YPS6P40583 537 aa2.12□□□□□ -2.07
DDR48YMR173W YPS5P53057 165 aa2.12□□□□□ -2.07
DDR48YMR173W YGL138CP53122 345 aa2.12□□□□□ -2.07
DDR48YMR173W YGR018CP53211 109 aa2.12□□□□□ -2.07
DDR48YMR173W LOT6Q07923 191 aa2.12□□□□□ -2.07
DDR48YMR173W SMC5Q08204 1093 aa2.12□□□□□ -2.07
DDR48YMR173W BUD21Q08492 214 aaPredicted RBP2.12□□□□□ -2.07
DDR48YMR173W CEX1Q12453 761 aa2.12□□□□□ -2.07
DDR48YMR173W DPH5P32469 300 aaPredicted RBP2.11□□□□□ -2.07
DDR48YMR173W DTR1P38125 572 aa2.11□□□□□ -2.07
DDR48YMR173W YHK8P38776 514 aa2.11□□□□□ -2.07
DDR48YMR173W MAM33P40513 266 aa2.11□□□□□ -2.07
DDR48YMR173W PGU1P47180 361 aa2.11□□□□□ -2.07
DDR48YMR173W TOM22P49334 152 aa2.11□□□□□ -2.07
DDR48YMR173W CRH1P53301 507 aa2.11□□□□□ -2.07
DDR48YMR173W COS1P53822 381 aa2.11□□□□□ -2.07
DDR48YMR173W MRPL19P53875 158 aa2.11□□□□□ -2.07
DDR48YMR173W TPS1Q00764 495 aaKnown RBP2.11□□□□□ -2.07
DDR48YMR173W YMR102CQ03177 834 aa2.11□□□□□ -2.07
DDR48YMR173W CCE1Q03702 353 aa2.11□□□□□ -2.07
DDR48YMR173W TAF11Q04226 346 aa2.11□□□□□ -2.07
DDR48YMR173W LIP2Q06005 328 aa2.11□□□□□ -2.07
DDR48YMR173W SNT309Q06091 175 aaPredicted RBP2.11□□□□□ -2.07
DDR48YMR173W COG4Q06096 861 aa2.11□□□□□ -2.07
DDR48YMR173W PIN3Q06449 215 aa2.11□□□□□ -2.07
DDR48YMR173W BI3Q9ZZW7 517 aa2.11□□□□□ -2.07
DDR48YMR173W CCH1P50077 2039 aa2.11□□□□□ -2.07
DDR48YMR173W ADH1P00330 348 aaKnown RBP2.1□□□□□ -2.07
DDR48YMR173W ADE4P04046 510 aaKnown RBP2.1□□□□□ -2.07
DDR48YMR173W IES6P32617 166 aa2.1□□□□□ -2.07
DDR48YMR173W SAS3P34218 831 aa2.1□□□□□ -2.07
DDR48YMR173W GPI18P38211 433 aa2.1□□□□□ -2.07
DDR48YMR173W EGT2P42835 1041 aa2.1□□□□□ -2.07
DDR48YMR173W AIM24P47127 394 aa2.1□□□□□ -2.07
DDR48YMR173W FLC3P53121 802 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms