RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C YDL121CQ07541 149 aa2.42□□□□□ -2.02
UBX4YMR067C COS7Q07788 383 aa2.42□□□□□ -2.02
UBX4YMR067C PSK1P31374 1356 aa2.41□□□□□ -2.02
UBX4YMR067C MSI1P13712 422 aa2.41□□□□□ -2.02
UBX4YMR067C CLB3P24870 427 aa2.41□□□□□ -2.02
UBX4YMR067C SOR1P35497 357 aaKnown RBP2.41□□□□□ -2.02
UBX4YMR067C NUP116Q02630 1113 aa2.41□□□□□ -2.02
UBX4YMR067C SOR2Q07786 357 aa2.41□□□□□ -2.02
UBX4YMR067C YPQ1Q12010 308 aa2.41□□□□□ -2.02
UBX4YMR067C MET17P06106 444 aa2.4□□□□□ -2.03
UBX4YMR067C PRB1P09232 635 aa2.4□□□□□ -2.03
UBX4YMR067C CHK1P38147 527 aa2.4□□□□□ -2.03
UBX4YMR067C SEO1P39709 593 aa2.4□□□□□ -2.03
UBX4YMR067C YFR057WP43625 151 aa2.4□□□□□ -2.03
UBX4YMR067C PHO86P46956 311 aa2.4□□□□□ -2.03
UBX4YMR067C MDM36Q06820 579 aa2.4□□□□□ -2.03
UBX4YMR067C SMF3Q12078 473 aaPredicted RBP2.4□□□□□ -2.03
UBX4YMR067C YGK3Q12222 375 aaPredicted RBP2.4□□□□□ -2.03
UBX4YMR067C ATG34Q12292 412 aa2.4□□□□□ -2.03
UBX4YMR067C AHC1Q12433 566 aa2.4□□□□□ -2.03
UBX4YMR067C RTN2Q12443 393 aa2.4□□□□□ -2.03
UBX4YMR067C YCL068CP25593 260 aa2.39□□□□□ -2.03
UBX4YMR067C PHA2P32452 334 aa2.39□□□□□ -2.03
UBX4YMR067C SBE22P38814 852 aa2.39□□□□□ -2.03
UBX4YMR067C BIR1P47134 954 aa2.39□□□□□ -2.03
UBX4YMR067C MRPL19P53875 158 aa2.39□□□□□ -2.03
UBX4YMR067C AIM32Q04689 311 aa2.39□□□□□ -2.03
UBX4YMR067C BUG1Q12191 341 aa2.39□□□□□ -2.03
UBX4YMR067C SRV2P17555 526 aaKnown RBP2.38□□□□□ -2.03
UBX4YMR067C NIP1P32497 812 aaKnown RBP2.38□□□□□ -2.03
UBX4YMR067C RRP4P38792 359 aaKnown RBP2.38□□□□□ -2.03
UBX4YMR067C PHB2P50085 310 aa2.38□□□□□ -2.03
UBX4YMR067C YGL138CP53122 345 aa2.38□□□□□ -2.03
UBX4YMR067C MRM2P53123 320 aa2.38□□□□□ -2.03
UBX4YMR067C MST27P53176 234 aa2.38□□□□□ -2.03
UBX4YMR067C MKC7P53379 596 aa2.38□□□□□ -2.03
UBX4YMR067C SKO1Q02100 647 aa2.38□□□□□ -2.03
UBX4YMR067C URH1Q04179 340 aa2.38□□□□□ -2.03
UBX4YMR067C RTN1Q04947 295 aaKnown RBP2.38□□□□□ -2.03
UBX4YMR067C LIP2Q06005 328 aa2.38□□□□□ -2.03
UBX4YMR067C COG4Q06096 861 aa2.38□□□□□ -2.03
UBX4YMR067C DNL4Q08387 944 aaPredicted RBP2.38□□□□□ -2.03
UBX4YMR067C IES4Q08561 116 aa2.38□□□□□ -2.03
UBX4YMR067C CEX1Q12453 761 aa2.38□□□□□ -2.03
UBX4YMR067C COX4P04037 155 aa2.37□□□□□ -2.03
UBX4YMR067C RED1P14291 827 aa2.37□□□□□ -2.03
UBX4YMR067C YME2P32843 850 aa2.37□□□□□ -2.03
UBX4YMR067C YKL097CP34245 136 aa2.37□□□□□ -2.03
UBX4YMR067C YBR056WP38081 501 aa2.37□□□□□ -2.03
UBX4YMR067C RRN10P38204 145 aa2.37□□□□□ -2.03
UBX4YMR067C OM14P38325 134 aa2.37□□□□□ -2.03
UBX4YMR067C OXA1P39952 402 aa2.37□□□□□ -2.03
UBX4YMR067C YER186CP40101 306 aa2.37□□□□□ -2.03
UBX4YMR067C ALF1P53904 254 aa2.37□□□□□ -2.03
UBX4YMR067C RRP9Q06506 573 aaKnown RBP2.37□□□□□ -2.03
UBX4YMR067C CBP6P07253 162 aaPredicted RBP2.36□□□□□ -2.03
UBX4YMR067C ERG3P32353 365 aa2.36□□□□□ -2.03
UBX4YMR067C CYS4P32582 507 aaKnown RBP2.36□□□□□ -2.03
UBX4YMR067C IES6P32617 166 aa2.36□□□□□ -2.03
UBX4YMR067C SAS3P34218 831 aa2.36□□□□□ -2.03
UBX4YMR067C MMS4P38257 691 aa2.36□□□□□ -2.03
UBX4YMR067C BAT1P38891 393 aaKnown RBP2.36□□□□□ -2.03
UBX4YMR067C MAM33P40513 266 aa2.36□□□□□ -2.03
UBX4YMR067C ATG18P43601 500 aa2.36□□□□□ -2.03
UBX4YMR067C CCE1Q03702 353 aa2.36□□□□□ -2.03
UBX4YMR067C YET2Q04210 160 aa2.36□□□□□ -2.03
UBX4YMR067C TAF11Q04226 346 aa2.36□□□□□ -2.03
UBX4YMR067C LOT6Q07923 191 aa2.36□□□□□ -2.03
UBX4YMR067C SMC5Q08204 1093 aa2.36□□□□□ -2.03
UBX4YMR067C YOL159C-AQ3E769 90 aa2.36□□□□□ -2.03
UBX4YMR067C HOM3P10869 527 aa2.35□□□□□ -2.03
UBX4YMR067C REC107P21651 314 aa2.35□□□□□ -2.03
UBX4YMR067C CDC50P25656 391 aa2.35□□□□□ -2.03
UBX4YMR067C DPH2P32461 534 aa2.35□□□□□ -2.03
UBX4YMR067C TFB1P32776 642 aa2.35□□□□□ -2.03
UBX4YMR067C ATP3P38077 311 aaKnown RBP2.35□□□□□ -2.03
UBX4YMR067C TIM17P39515 158 aa2.35□□□□□ -2.03
UBX4YMR067C NOC2P39744 710 aaKnown RBP2.35□□□□□ -2.03
UBX4YMR067C PTI1P39927 425 aaPredicted RBP2.35□□□□□ -2.03
UBX4YMR067C ALD5P40047 520 aaKnown RBP2.35□□□□□ -2.03
UBX4YMR067C SIM1P40472 476 aa2.35□□□□□ -2.03
UBX4YMR067C CHS6P40955 746 aa2.35□□□□□ -2.03
UBX4YMR067C BNS1P50084 137 aa2.35□□□□□ -2.03
UBX4YMR067C CLD1P53264 445 aa2.35□□□□□ -2.03
UBX4YMR067C MRPS16Q02608 121 aa2.35□□□□□ -2.03
UBX4YMR067C KAP120Q02932 1032 aa2.35□□□□□ -2.03
UBX4YMR067C YMR102CQ03177 834 aa2.35□□□□□ -2.03
UBX4YMR067C TSR2Q06672 205 aaKnown RBP2.35□□□□□ -2.03
UBX4YMR067C MED2Q12124 431 aa2.35□□□□□ -2.03
UBX4YMR067C SFI1Q12369 946 aa2.35□□□□□ -2.03
UBX4YMR067C NFU1P32860 256 aa2.34□□□□□ -2.03
UBX4YMR067C HAC1P41546 238 aa2.34□□□□□ -2.03
UBX4YMR067C AIM24P47127 394 aa2.34□□□□□ -2.03
UBX4YMR067C YPS5P53057 165 aa2.34□□□□□ -2.03
UBX4YMR067C CRH1P53301 507 aa2.34□□□□□ -2.03
UBX4YMR067C DON1Q05610 365 aa2.34□□□□□ -2.03
UBX4YMR067C EAF3Q12432 401 aa2.34□□□□□ -2.03
UBX4YMR067C PGA3Q12746 312 aaKnown RBP2.34□□□□□ -2.03
UBX4YMR067C ADE4P04046 510 aaKnown RBP2.33□□□□□ -2.04
UBX4YMR067C ANR2P36090 516 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms