RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C BUG1Q12191 341 aa4.49□□□□□ -1.69
PEX12YMR026C TY1B-AO13527 1196 aaKnown RBP4.48□□□□□ -1.69
PEX12YMR026C CLN1P20437 546 aa4.48□□□□□ -1.69
PEX12YMR026C CLB1P24868 471 aa4.48□□□□□ -1.69
PEX12YMR026C MUD1P32605 298 aaKnown RBP4.48□□□□□ -1.69
PEX12YMR026C SWD3P38123 315 aa4.48□□□□□ -1.69
PEX12YMR026C AZR1P50080 613 aa4.48□□□□□ -1.69
PEX12YMR026C YML6P51998 286 aa4.48□□□□□ -1.69
PEX12YMR026C HOT1Q03213 719 aa4.48□□□□□ -1.69
PEX12YMR026C PAL1Q05518 499 aaKnown RBP4.48□□□□□ -1.69
PEX12YMR026C ISA2Q12425 185 aa4.48□□□□□ -1.69
PEX12YMR026C ADH2P00331 348 aaKnown RBP4.47□□□□□ -1.69
PEX12YMR026C TRP1P00912 224 aa4.47□□□□□ -1.69
PEX12YMR026C RPS8AP0CX39 200 aaKnown RBP4.47□□□□□ -1.69
PEX12YMR026C RPS8BP0CX40 200 aaKnown RBP4.47□□□□□ -1.69
PEX12YMR026C PET123P17558 318 aa4.47□□□□□ -1.69
PEX12YMR026C ISY1P21374 235 aaPredicted RBP4.47□□□□□ -1.69
PEX12YMR026C DAL2P25335 343 aa4.47□□□□□ -1.69
PEX12YMR026C MNS1P32906 549 aa4.47□□□□□ -1.69
PEX12YMR026C SLM4P38247 162 aa4.47□□□□□ -1.69
PEX12YMR026C RRT2P38332 387 aa4.47□□□□□ -1.69
PEX12YMR026C RRP4P38792 359 aaKnown RBP4.47□□□□□ -1.69
PEX12YMR026C PRE5P40302 234 aaKnown RBP4.47□□□□□ -1.69
PEX12YMR026C JEM1P40358 645 aa4.47□□□□□ -1.69
PEX12YMR026C PAN6P40459 309 aa4.47□□□□□ -1.69
PEX12YMR026C ATP22P50273 684 aaPredicted RBP4.47□□□□□ -1.69
PEX12YMR026C CWC25P53854 179 aaKnown RBP4.47□□□□□ -1.69
PEX12YMR026C RMT2Q03305 412 aa4.47□□□□□ -1.69
PEX12YMR026C YLR345WQ06137 509 aa4.47□□□□□ -1.69
PEX12YMR026C HRT3Q12347 344 aa4.47□□□□□ -1.69
PEX12YMR026C DAL5P15365 543 aa4.46□□□□□ -1.7
PEX12YMR026C MSG5P38590 489 aa4.46□□□□□ -1.7
PEX12YMR026C LRP1P38801 184 aaKnown RBP4.46□□□□□ -1.7
PEX12YMR026C CAJ1P39101 391 aa4.46□□□□□ -1.7
PEX12YMR026C MPP10P47083 593 aaKnown RBP4.46□□□□□ -1.7
PEX12YMR026C TCB2P48231 1178 aa4.46□□□□□ -1.7
PEX12YMR026C OCA2P53949 197 aa4.46□□□□□ -1.7
PEX12YMR026C OAZ1Q02803 292 aa4.46□□□□□ -1.7
PEX12YMR026C MED2Q12124 431 aa4.46□□□□□ -1.7
PEX12YMR026C CYC3P06182 269 aa4.45□□□□□ -1.7
PEX12YMR026C NFT1P0CE68 1218 aa4.45□□□□□ -1.7
PEX12YMR026C CPR2P23285 205 aa4.45□□□□□ -1.7
PEX12YMR026C RAD57P25301 460 aa4.45□□□□□ -1.7
PEX12YMR026C NIP1P32497 812 aaKnown RBP4.45□□□□□ -1.7
PEX12YMR026C MRPL4P36517 319 aa4.45□□□□□ -1.7
PEX12YMR026C ZIM17P42844 174 aa4.45□□□□□ -1.7
PEX12YMR026C SDT1P53078 280 aa4.45□□□□□ -1.7
PEX12YMR026C YDR286CQ05530 114 aa4.45□□□□□ -1.7
PEX12YMR026C SRL2Q12020 392 aa4.45□□□□□ -1.7
PEX12YMR026C VPS54Q12071 889 aa4.45□□□□□ -1.7
PEX12YMR026C COX3P00420 269 aa4.44□□□□□ -1.7
PEX12YMR026C ADE4P04046 510 aaKnown RBP4.44□□□□□ -1.7
PEX12YMR026C TOM22P49334 152 aa4.44□□□□□ -1.7
PEX12YMR026C RHO5P53879 331 aaKnown RBP4.44□□□□□ -1.7
PEX12YMR026C URH1Q04179 340 aa4.44□□□□□ -1.7
PEX12YMR026C BCH1Q05029 724 aa4.44□□□□□ -1.7
PEX12YMR026C ATG34Q12292 412 aa4.44□□□□□ -1.7
PEX12YMR026C MTR10Q99189 972 aa4.44□□□□□ -1.7
PEX12YMR026C KAR9P32526 644 aa4.43□□□□□ -1.7
PEX12YMR026C RXT2P38255 430 aa4.43□□□□□ -1.7
PEX12YMR026C JLP2P40206 208 aa4.43□□□□□ -1.7
PEX12YMR026C SFH5P47008 294 aa4.43□□□□□ -1.7
PEX12YMR026C ADD37Q03233 198 aa4.43□□□□□ -1.7
PEX12YMR026C SNT309Q06091 175 aaPredicted RBP4.43□□□□□ -1.7
PEX12YMR026C ARO3P14843 370 aaKnown RBP4.42□□□□□ -1.7
PEX12YMR026C MNE1P24720 663 aa4.42□□□□□ -1.7
PEX12YMR026C SER3P40054 469 aa4.42□□□□□ -1.7
PEX12YMR026C AIM32Q04689 311 aa4.42□□□□□ -1.7
PEX12YMR026C TMC1Q08422 150 aaPredicted RBP4.42□□□□□ -1.7
PEX12YMR026C FDH1Q08911 376 aa4.42□□□□□ -1.7
PEX12YMR026C YRM1Q12340 786 aa4.42□□□□□ -1.7
PEX12YMR026C NOP1P15646 327 aaKnown RBP4.41□□□□□ -1.7
PEX12YMR026C RVS161P25343 265 aaKnown RBP4.41□□□□□ -1.7
PEX12YMR026C POP5P28005 173 aa4.41□□□□□ -1.7
PEX12YMR026C POP2P39008 433 aa4.41□□□□□ -1.7
PEX12YMR026C VHS2P40463 436 aa4.41□□□□□ -1.7
PEX12YMR026C YPS6P40583 537 aa4.41□□□□□ -1.7
PEX12YMR026C LCB2P40970 561 aa4.41□□□□□ -1.7
PEX12YMR026C PEX25Q02969 394 aa4.41□□□□□ -1.7
PEX12YMR026C RPN9Q04062 393 aaKnown RBP4.41□□□□□ -1.7
PEX12YMR026C GYL1Q04322 720 aa4.41□□□□□ -1.7
PEX12YMR026C MHR1Q06630 226 aa4.41□□□□□ -1.7
PEX12YMR026C RBD2Q12270 262 aa4.41□□□□□ -1.7
PEX12YMR026C TPT1Q12272 230 aaKnown RBP4.41□□□□□ -1.7
PEX12YMR026C PAR32Q12515 295 aaKnown RBP4.41□□□□□ -1.7
PEX12YMR026C IMA3P0CW40 589 aa4.4□□□□□ -1.71
PEX12YMR026C IMA4P0CW41 589 aa4.4□□□□□ -1.71
PEX12YMR026C TPM1P17536 199 aaKnown RBP4.4□□□□□ -1.71
PEX12YMR026C KRR1P25586 316 aaPredicted RBP4.4□□□□□ -1.71
PEX12YMR026C ASC1P38011 319 aaKnown RBP4.4□□□□□ -1.71
PEX12YMR026C PES4P39684 611 aa4.4□□□□□ -1.71
PEX12YMR026C CIK1Q01649 594 aa4.4□□□□□ -1.71
PEX12YMR026C IMA2Q08295 589 aa4.4□□□□□ -1.71
PEX12YMR026C AEP3Q12089 606 aa4.4□□□□□ -1.71
PEX12YMR026C MDH1P17505 334 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
PEX12YMR026C MDL1P33310 695 aa4.39□□□□□ -1.71
PEX12YMR026C YBR056WP38081 501 aa4.39□□□□□ -1.71
PEX12YMR026C GAT2P40209 560 aa4.39□□□□□ -1.71
PEX12YMR026C RRP9Q06506 573 aaKnown RBP4.39□□□□□ -1.71
PEX12YMR026C PGC1Q08959 321 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms