RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	KRE9	P39005	276 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	CCT2	P39076	527 aa	Known RBP	3.22	□□□□□ -1.89
RPN13	YLR421C	ELO1	P39540	310 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	TIF4631	P39935	952 aa	Known RBP	3.22	□□□□□ -1.89
RPN13	YLR421C	BUR6	P40096	142 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	ALG5	P40350	334 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	SYG1	P40528	902 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	YNL320W	P42840	284 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	MDE1	P47095	244 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	DIA3	P52290	468 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	RPT4	P53549	437 aa	Known RBP	3.22	□□□□□ -1.89
RPN13	YLR421C	MSC1	Q03104	513 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
RPN13	YLR421C	BSC1	Q12140	328 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	PSY3	Q12318	242 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	NCA2	Q12374	616 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	CTF3	Q12748	733 aa		3.22	□□□□□ -1.89
RPN13	YLR421C	POM152	P39685	1337 aa		3.21	□□□□□ -1.89
RPN13	YLR421C	TUS1	Q06412	1307 aa		3.21	□□□□□ -1.89
RPN13	YLR421C	HIP1	P06775	603 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	THR4	P16120	514 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	EST1	P17214	699 aa	Predicted RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	GLK1	P17709	500 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	DAP2	P18962	818 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	BMH1	P29311	267 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	TFB1	P32776	642 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	HCS1	P34243	683 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	YPK3	P38070	525 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	SEC27	P41811	889 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	AIP1	P46680	615 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	ECM27	P47144	725 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	YGR127W	P53275	312 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	ERV25	P54837	211 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	SKO1	Q02100	647 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	PFA5	Q03289	374 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	YMR160W	Q03823	816 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	PLP1	Q04004	230 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	YDR415C	Q04033	374 aa	Predicted RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	PPM1	Q04081	328 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	DAP1	Q12091	152 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	SGT2	Q12118	346 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	LEU9	Q12166	604 aa	Known RBP	3.21	□□□□□ -1.9
RPN13	YLR421C	MSH5	Q12175	901 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	IES3	Q12345	250 aa		3.21	□□□□□ -1.9
RPN13	YLR421C	SSK22	P25390	1331 aa	Predicted RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	BUD5	P25300	642 aa	Predicted RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	AFG1	P32317	509 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	VPH2	P32341	215 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	YBL055C	P34220	418 aa	Predicted RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	TUL1	P36096	758 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	DBP7	P36120	742 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	RIM2	P38127	377 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	TSC10	P38342	320 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	OSH3	P38713	996 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	PEX18	P38855	283 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	SMX2	P40204	77 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	URB2	P47108	1174 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	COS5	P47187	383 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	BRO1	P48582	844 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	DSL1	P53847	754 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	PDR16	P53860	351 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	YNL040W	P53960	456 aa	Predicted RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	SLG1	P54867	378 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	EBS1	Q03466	884 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	EKI1	Q03764	534 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	ACL4	Q03771	387 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	YMR114C	Q04471	368 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	DPB4	Q04603	196 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	DBP9	Q06218	594 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	ATG26	Q06321	1198 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	ATG17	Q06410	417 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	COS7	Q07788	383 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	NSE1	Q07913	336 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	SIL1	Q08199	421 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	RSA1	Q08932	381 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	GET4	Q12125	312 aa		3.2	□□□□□ -1.9
RPN13	YLR421C	RIO1	Q12196	484 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	RRP36	Q12481	300 aa	Predicted RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	HTZ1	Q12692	134 aa	Known RBP	3.2	□□□□□ -1.9
RPN13	YLR421C	STF1	P01098	86 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	CHO1	P08456	276 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	SRV2	P17555	526 aa	Known RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	PRP2	P20095	876 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	SPS22	P25380	463 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	BOS1	P25385	244 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	IMG1	P25626	169 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	BUD23	P25627	275 aa	Predicted RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	ITR2	P30606	609 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	PRO3	P32263	286 aa	Known RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	SMI1	P32566	505 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	SSE1	P32589	693 aa	Known RBP	3.19	□□□□□ -1.9
RPN13	YLR421C	RPC25	P35718	212 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	YKR015C	P36111	568 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	FES1	P38260	290 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	HSM3	P38348	480 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	ARP1	P38696	384 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	MSR1	P38714	643 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	MLH1	P38920	769 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	SER3	P40054	469 aa		3.19	□□□□□ -1.9
RPN13	YLR421C	PCL7	P40186	285 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms