RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS36	YLR417W	QDR3	P38227	689 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	BZZ1	P38822	633 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	YND1	P40009	630 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	GCD10	P41814	478 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	CUE3	P53137	624 aa	Known RBP	4.61	□□□□□ -1.67
VPS36	YLR417W	YNR048W	P53740	393 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	PDR16	P53860	351 aa	Known RBP	4.61	□□□□□ -1.67
VPS36	YLR417W	RSN1	Q03516	953 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	PML1	Q07930	204 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS36	YLR417W	RMD5	Q12508	421 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	SCC2	Q04002	1493 aa		4.61	□□□□□ -1.67
VPS36	YLR417W	QCR6	P00127	147 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MTF1	P14908	341 aa	Known RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	NDC1	P32500	655 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	GLC7	P32598	312 aa	Known RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	RTT107	P38850	1070 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MNL1	P38888	796 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	YER079W	P40052	210 aa	Known RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	YIL089W	P40500	205 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	RPA34	P47006	233 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	MDE1	P47095	244 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	SSN8	P47821	323 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	YNL143C	P53908	130 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	AQR1	P53943	586 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MMT1	Q03218	510 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MGR3	Q04472	501 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MUM3	Q08750	479 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	YPR022C	Q12139	1133 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MON2	P48563	1636 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	IMA3	P0CW40	589 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	IMA4	P0CW41	589 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MRS3	P10566	314 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	RDS1	P25611	832 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	TIP1	P27654	210 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	IME2	P32581	645 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	YSC83	P32792	385 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	ALG8	P40351	577 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	EFM3	P47163	339 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	YNR068C	P53754	272 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	MRP51	Q02950	344 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	BET5	Q03630	159 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	IMA2	Q08295	589 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	TIM18	Q08749	192 aa		4.6	□□□□□ -1.67
VPS36	YLR417W	PKH2	Q12236	1081 aa	Known RBP	4.6	□□□□□ -1.67
VPS36	YLR417W	DST1	P07273	309 aa		4.59	□□□□□ -1.67
VPS36	YLR417W	TAL1	P15019	335 aa	Known RBP	4.59	□□□□□ -1.67
VPS36	YLR417W	PRP16	P15938	1071 aa	Predicted RBP	4.59	□□□□□ -1.67
VPS36	YLR417W	YBL028C	P38202	106 aa		4.59	□□□□□ -1.67
VPS36	YLR417W	RTT101	P47050	842 aa		4.59	□□□□□ -1.67
VPS36	YLR417W	AVT4	P50944	713 aa		4.59	□□□□□ -1.67
VPS36	YLR417W	ADA2	Q02336	434 aa		4.59	□□□□□ -1.67
VPS36	YLR417W	RRP9	Q06506	573 aa	Known RBP	4.59	□□□□□ -1.67
VPS36	YLR417W	YOR1	P53049	1477 aa		4.59	□□□□□ -1.68
VPS36	YLR417W	YPK9	Q12697	1472 aa		4.59	□□□□□ -1.68
VPS36	YLR417W	ESP1	Q03018	1630 aa		4.59	□□□□□ -1.68
VPS36	YLR417W	ATR1	P13090	542 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	STP2	P38704	541 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	RRT5	P43607	289 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	SHE4	P51534	789 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	POP6	P53218	158 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	RTT102	P53330	157 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	UTP6	Q02354	440 aa	Known RBP	4.58	□□□□□ -1.68
VPS36	YLR417W	STD1	Q02794	444 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	NUP53	Q03790	475 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	ERP1	Q05359	219 aa	Known RBP	4.58	□□□□□ -1.68
VPS36	YLR417W	RGT2	Q12300	763 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	TSC11	P40061	1430 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	TEF1	P02994	458 aa	Known RBP	4.58	□□□□□ -1.68
VPS36	YLR417W	SCH9	P11792	824 aa	Known RBP	4.58	□□□□□ -1.68
VPS36	YLR417W	SPO12	P17123	173 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	SEC1	P30619	724 aa	Known RBP	4.58	□□□□□ -1.68
VPS36	YLR417W	PHB2	P50085	310 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	PRP3	Q03338	469 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS36	YLR417W	SRL2	Q12020	392 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	RNH203	Q12338	110 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	SFG1	Q12507	346 aa		4.58	□□□□□ -1.68
VPS36	YLR417W	MHP1	P43638	1398 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	SRB8	P25648	1427 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	GEA1	P47102	1408 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS36	YLR417W	PMU1	P36069	295 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	MTC4	P38335	694 aa	Known RBP	4.57	□□□□□ -1.68
VPS36	YLR417W	MST28	P39552	234 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	LAM5	P43560	674 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	URC2	Q04411	772 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	AAD15	Q08361	143 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	HIF1	Q12373	385 aa		4.57	□□□□□ -1.68
VPS36	YLR417W	SNQ2	P32568	1501 aa	Known RBP	4.56	□□□□□ -1.68
VPS36	YLR417W	ITR1	P30605	584 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	RGT1	P32862	1170 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	YBR056W	P38081	501 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	SAD1	P43589	448 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	YPL068C	Q02749	293 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	PIR3	Q03180	325 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	RRB1	Q04225	511 aa	Known RBP	4.56	□□□□□ -1.68
VPS36	YLR417W	YPL199C	Q08954	240 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	BPT1	P14772	1559 aa		4.56	□□□□□ -1.68
VPS36	YLR417W	YLR419W	Q06698	1435 aa	Known RBP	4.56	□□□□□ -1.68
VPS36	YLR417W	RPP0	P05317	312 aa	Known RBP	4.55	□□□□□ -1.68
VPS36	YLR417W	RPL15A	P05748	204 aa	Known RBP	4.55	□□□□□ -1.68
VPS36	YLR417W	RPL20A	P0CX23	172 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms