RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W OPT1P40897 799 aa2.2□□□□□ -2.06
NUP100YKL068W TAX4P47030 604 aa2.2□□□□□ -2.06
NUP100YKL068W ASN2P49090 572 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W VPS73P53142 486 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W DRN1P53255 507 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W ERG5P54781 538 aa2.2□□□□□ -2.06
NUP100YKL068W SRL4Q03085 281 aa2.2□□□□□ -2.06
NUP100YKL068W PLB2Q03674 706 aa2.2□□□□□ -2.06
NUP100YKL068W TAF12Q03761 539 aa2.2□□□□□ -2.06
NUP100YKL068W MYO5Q04439 1219 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W NDL1Q06568 189 aa2.2□□□□□ -2.06
NUP100YKL068W SNA4Q07549 140 aa2.2□□□□□ -2.06
NUP100YKL068W DSE3Q08729 430 aa2.2□□□□□ -2.06
NUP100YKL068W MED2Q12124 431 aa2.2□□□□□ -2.06
NUP100YKL068W ATG9Q12142 997 aa2.2□□□□□ -2.06
NUP100YKL068W GLE1Q12315 538 aa2.2□□□□□ -2.06
NUP100YKL068W PAA1Q12447 191 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W GAL10P04397 699 aa2.2□□□□□ -2.06
NUP100YKL068W SPS4P09937 338 aa2.2□□□□□ -2.06
NUP100YKL068W NFT1P0CE68 1218 aa2.2□□□□□ -2.06
NUP100YKL068W SRP54P20424 541 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W DAL2P25335 343 aa2.2□□□□□ -2.06
NUP100YKL068W YCP4P25349 247 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W PTC6P25646 442 aa2.2□□□□□ -2.06
NUP100YKL068W GAC1P28006 793 aa2.2□□□□□ -2.06
NUP100YKL068W MSS1P32559 526 aaPredicted RBP2.2□□□□□ -2.06
NUP100YKL068W YSC83P32792 385 aa2.2□□□□□ -2.06
NUP100YKL068W RPC34P32910 317 aa2.2□□□□□ -2.06
NUP100YKL068W ELF1P36053 145 aa2.2□□□□□ -2.06
NUP100YKL068W SDH8P38345 138 aa2.2□□□□□ -2.06
NUP100YKL068W EFM2P38347 419 aa2.2□□□□□ -2.06
NUP100YKL068W DIA4P38705 446 aaPredicted RBP2.2□□□□□ -2.06
NUP100YKL068W PRM9P39551 298 aa2.2□□□□□ -2.06
NUP100YKL068W ECM1P39715 212 aa2.2□□□□□ -2.06
NUP100YKL068W YGL108CP53139 140 aa2.2□□□□□ -2.06
NUP100YKL068W RPM2Q02773 1202 aa2.2□□□□□ -2.06
NUP100YKL068W UBP16Q02863 499 aa2.2□□□□□ -2.06
NUP100YKL068W YDR541CQ03049 344 aa2.2□□□□□ -2.06
NUP100YKL068W ENT5Q03769 411 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W SSY1Q03770 852 aa2.2□□□□□ -2.06
NUP100YKL068W YMR310CQ04867 317 aaPredicted RBP2.2□□□□□ -2.06
NUP100YKL068W FUS2Q05670 677 aa2.2□□□□□ -2.06
NUP100YKL068W DUS4Q06063 367 aa2.2□□□□□ -2.06
NUP100YKL068W IPK1Q06667 281 aa2.2□□□□□ -2.06
NUP100YKL068W CYK3Q07533 885 aa2.2□□□□□ -2.06
NUP100YKL068W TPO1Q07824 586 aa2.2□□□□□ -2.06
NUP100YKL068W TEN1Q07921 160 aa2.2□□□□□ -2.06
NUP100YKL068W LOT6Q07923 191 aa2.2□□□□□ -2.06
NUP100YKL068W SMC5Q08204 1093 aa2.2□□□□□ -2.06
NUP100YKL068W PUS9Q12069 462 aa2.2□□□□□ -2.06
NUP100YKL068W YOR029WQ12243 111 aa2.2□□□□□ -2.06
NUP100YKL068W INP53Q12271 1107 aa2.2□□□□□ -2.06
NUP100YKL068W JIP3O13555 125 aa2.2□□□□□ -2.06
NUP100YKL068W ARG4P04076 463 aaPredicted RBP2.2□□□□□ -2.06
NUP100YKL068W RPL24AP04449 155 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W YMR085WP0CF18 432 aa2.2□□□□□ -2.06
NUP100YKL068W YPK1P12688 680 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W PEP5P12868 1029 aa2.2□□□□□ -2.06
NUP100YKL068W POL30P15873 258 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W SAR1P20606 190 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W YSR3P23501 404 aa2.2□□□□□ -2.06
NUP100YKL068W CSM1P25651 190 aa2.2□□□□□ -2.06
NUP100YKL068W DEG1P31115 442 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W GMH1P36125 273 aa2.2□□□□□ -2.06
NUP100YKL068W NUP133P36161 1157 aa2.2□□□□□ -2.06
NUP100YKL068W KAP104P38217 918 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W SMF2P38778 549 aa2.2□□□□□ -2.06
NUP100YKL068W YHR210CP38893 341 aa2.2□□□□□ -2.06
NUP100YKL068W PRP39P39682 629 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W LSB3P43603 459 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W FAR3P46671 204 aa2.2□□□□□ -2.06
NUP100YKL068W HIT1P46973 164 aa2.2□□□□□ -2.06
NUP100YKL068W AMA1P50082 593 aa2.2□□□□□ -2.06
NUP100YKL068W YGR035CP53222 116 aa2.2□□□□□ -2.06
NUP100YKL068W SPC98P53540 846 aa2.2□□□□□ -2.06
NUP100YKL068W YMR187CQ03236 431 aa2.2□□□□□ -2.06
NUP100YKL068W BNA7Q04066 261 aa2.2□□□□□ -2.06
NUP100YKL068W APC4Q04601 652 aa2.2□□□□□ -2.06
NUP100YKL068W PDR8Q06149 701 aa2.2□□□□□ -2.06
NUP100YKL068W MRI1Q06489 411 aaKnown RBP2.2□□□□□ -2.06
NUP100YKL068W GET4Q12125 312 aa2.2□□□□□ -2.06
NUP100YKL068W YLR122CQ12312 125 aa2.2□□□□□ -2.06
NUP100YKL068W ATG31Q12421 196 aa2.2□□□□□ -2.06
NUP100YKL068W CMC2Q3E7A4 109 aa2.2□□□□□ -2.06
NUP100YKL068W CYC1P00044 109 aaPredicted RBP2.19□□□□□ -2.06
NUP100YKL068W MSF1P08425 469 aa2.19□□□□□ -2.06
NUP100YKL068W MAS1P10507 462 aa2.19□□□□□ -2.06
NUP100YKL068W AMD2P22580 549 aa2.19□□□□□ -2.06
NUP100YKL068W RHB1P25378 209 aa2.19□□□□□ -2.06
NUP100YKL068W PRR1P28708 518 aa2.19□□□□□ -2.06
NUP100YKL068W ATP11P32453 318 aa2.19□□□□□ -2.06
NUP100YKL068W RRP4P38792 359 aaKnown RBP2.19□□□□□ -2.06
NUP100YKL068W FET3P38993 636 aa2.19□□□□□ -2.06
NUP100YKL068W ECM10P39987 644 aa2.19□□□□□ -2.06
NUP100YKL068W FMC1P40491 155 aa2.19□□□□□ -2.06
NUP100YKL068W YIR042CP40586 236 aa2.19□□□□□ -2.06
NUP100YKL068W FMP33P46998 180 aa2.19□□□□□ -2.06
NUP100YKL068W MPS3P47069 682 aa2.19□□□□□ -2.06
NUP100YKL068W MSY1P48527 492 aa2.19□□□□□ -2.06
NUP100YKL068W BET4Q00618 327 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms