RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP120YKL057C SMC5Q08204 1093 aa1.93□□□□□ -2.1
NUP120YKL057C APL5Q08951 932 aaKnown RBP1.93□□□□□ -2.1
NUP120YKL057C GRX6Q12438 231 aa1.93□□□□□ -2.1
NUP120YKL057C TFB5Q3E7C1 72 aaPredicted RBP1.93□□□□□ -2.1
NUP120YKL057C CPR2P23285 205 aa1.93□□□□□ -2.1
NUP120YKL057C GRR1P24814 1151 aa1.93□□□□□ -2.1
NUP120YKL057C SDH3P33421 198 aa1.93□□□□□ -2.1
NUP120YKL057C CCT4P39078 528 aaKnown RBP1.93□□□□□ -2.1
NUP120YKL057C SYG1P40528 902 aa1.93□□□□□ -2.1
NUP120YKL057C KTR6P54070 446 aa1.93□□□□□ -2.1
NUP120YKL057C ODC1Q03028 310 aa1.93□□□□□ -2.1
NUP120YKL057C TAF11Q04226 346 aa1.93□□□□□ -2.1
NUP120YKL057C LPD1P09624 499 aaKnown RBP1.92□□□□□ -2.1
NUP120YKL057C YLL053CP0CD98 152 aa1.92□□□□□ -2.1
NUP120YKL057C RVS161P25343 265 aaKnown RBP1.92□□□□□ -2.1
NUP120YKL057C YCP4P25349 247 aaKnown RBP1.92□□□□□ -2.1
NUP120YKL057C CCT6P39079 546 aa1.92□□□□□ -2.1
NUP120YKL057C YER184CP39961 794 aa1.92□□□□□ -2.1
NUP120YKL057C FAU1P40099 211 aa1.92□□□□□ -2.1
NUP120YKL057C SEC9P40357 651 aa1.92□□□□□ -2.1
NUP120YKL057C YMR111CQ04461 462 aaPredicted RBP1.92□□□□□ -2.1
NUP120YKL057C SPE3Q12074 293 aaKnown RBP1.92□□□□□ -2.1
NUP120YKL057C NFI1Q12216 726 aa1.92□□□□□ -2.1
NUP120YKL057C AYT1Q12226 474 aa1.92□□□□□ -2.1
NUP120YKL057C MEX67Q99257 599 aaKnown RBP1.92□□□□□ -2.1
NUP120YKL057C LSB5P25369 354 aa1.92□□□□□ -2.1
NUP120YKL057C INM1P38710 295 aa1.92□□□□□ -2.1
NUP120YKL057C YDR541CQ03049 344 aa1.92□□□□□ -2.1
NUP120YKL057C PCL9Q12477 304 aa1.92□□□□□ -2.1
NUP120YKL057C OPI3P05375 206 aa1.91□□□□□ -2.1
NUP120YKL057C VPS1P21576 704 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C NFU1P32860 256 aa1.91□□□□□ -2.1
NUP120YKL057C KEL1P38853 1164 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C SAS2P40963 338 aa1.91□□□□□ -2.1
NUP120YKL057C ASN2P49090 572 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C SPH1Q06160 661 aa1.91□□□□□ -2.1
NUP120YKL057C MMR1Q06324 491 aa1.91□□□□□ -2.1
NUP120YKL057C SUC2P00724 532 aa1.91□□□□□ -2.1
NUP120YKL057C TRP1P00912 224 aa1.91□□□□□ -2.1
NUP120YKL057C YER190C-BP0CX94 160 aa1.91□□□□□ -2.1
NUP120YKL057C YEL077W-AP0CX95 160 aa1.91□□□□□ -2.1
NUP120YKL057C YGR296C-BP0CX96 160 aa1.91□□□□□ -2.1
NUP120YKL057C YPL283W-BP0CX97 160 aa1.91□□□□□ -2.1
NUP120YKL057C YPR204C-AP0CX98 160 aa1.91□□□□□ -2.1
NUP120YKL057C LTV1P34078 463 aa1.91□□□□□ -2.1
NUP120YKL057C AIP1P46680 615 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C CUE3P53137 624 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C RPT4P53549 437 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C HER2Q03557 464 aa1.91□□□□□ -2.1
NUP120YKL057C YMR087WQ04299 284 aa1.91□□□□□ -2.1
NUP120YKL057C MRPL35Q06678 367 aa1.91□□□□□ -2.1
NUP120YKL057C ARF1P11076 181 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C SOL2P37262 315 aa1.91□□□□□ -2.1
NUP120YKL057C SPP381P38282 291 aaPredicted RBP1.91□□□□□ -2.1
NUP120YKL057C YIA6P40556 373 aa1.91□□□□□ -2.1
NUP120YKL057C SFH5P47008 294 aa1.91□□□□□ -2.1
NUP120YKL057C YJR030CP47101 745 aa1.91□□□□□ -2.1
NUP120YKL057C TRF5P48561 642 aaKnown RBP1.91□□□□□ -2.1
NUP120YKL057C MKC7P53379 596 aa1.91□□□□□ -2.1
NUP120YKL057C SMP3Q04174 516 aa1.91□□□□□ -2.1
NUP120YKL057C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
NUP120YKL057C IRC25Q07951 179 aa1.91□□□□□ -2.1
NUP120YKL057C YPQ1Q12010 308 aa1.91□□□□□ -2.1
NUP120YKL057C PFK27Q12471 397 aaPredicted RBP1.91□□□□□ -2.1
NUP120YKL057C YCL068CP25593 260 aa1.9□□□□□ -2.11
NUP120YKL057C ZTA1P38230 334 aaKnown RBP1.9□□□□□ -2.11
NUP120YKL057C ASA1Q06822 443 aa1.9□□□□□ -2.11
NUP120YKL057C RRP12Q12754 1228 aaKnown RBP1.9□□□□□ -2.11
NUP120YKL057C ATR1P13090 542 aa1.9□□□□□ -2.11
NUP120YKL057C YKL071WP36086 256 aa1.9□□□□□ -2.11
NUP120YKL057C YJR011CP47086 261 aaPredicted RBP1.9□□□□□ -2.11
NUP120YKL057C VEL1P53058 206 aa1.9□□□□□ -2.11
NUP120YKL057C CWC25P53854 179 aaKnown RBP1.9□□□□□ -2.11
NUP120YKL057C FSH2Q05015 223 aa1.9□□□□□ -2.11
NUP120YKL057C CLN3P13365 580 aa1.89□□□□□ -2.11
NUP120YKL057C CBS2P14905 389 aa1.89□□□□□ -2.11
NUP120YKL057C NPL6P32832 435 aa1.89□□□□□ -2.11
NUP120YKL057C AQR1P53943 586 aa1.89□□□□□ -2.11
NUP120YKL057C YDR115WQ04598 105 aa1.89□□□□□ -2.11
NUP120YKL057C GAS2Q06135 555 aa1.89□□□□□ -2.11
NUP120YKL057C AAD15Q08361 143 aa1.89□□□□□ -2.11
NUP120YKL057C SMF3Q12078 473 aaPredicted RBP1.89□□□□□ -2.11
NUP120YKL057C RKM5Q12367 367 aa1.89□□□□□ -2.11
NUP120YKL057C DPH2P32461 534 aa1.89□□□□□ -2.11
NUP120YKL057C PCH2P38126 564 aa1.89□□□□□ -2.11
NUP120YKL057C PRM5P40476 318 aa1.89□□□□□ -2.11
NUP120YKL057C PAC11P40960 533 aa1.89□□□□□ -2.11
NUP120YKL057C BUD27P43573 796 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
NUP120YKL057C YJR154WP47181 346 aa1.89□□□□□ -2.11
NUP120YKL057C MRM2P53123 320 aa1.89□□□□□ -2.11
NUP120YKL057C YOR365CQ08844 703 aa1.89□□□□□ -2.11
NUP120YKL057C YPR1Q12458 312 aa1.89□□□□□ -2.11
NUP120YKL057C SRN2Q99176 213 aa1.89□□□□□ -2.11
NUP120YKL057C YBR241CP38142 488 aa1.88□□□□□ -2.11
NUP120YKL057C YND1P40009 630 aa1.88□□□□□ -2.11
NUP120YKL057C VPS9P54787 451 aa1.88□□□□□ -2.11
NUP120YKL057C SHS1Q07657 551 aa1.88□□□□□ -2.11
NUP120YKL057C RPN5Q12250 445 aaKnown RBP1.88□□□□□ -2.11
NUP120YKL057C ERP3Q12403 225 aa1.88□□□□□ -2.11
NUP120YKL057C LAS1P36146 502 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms