RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W PRP39P39682 629 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W SAP1P39955 897 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W YEL057CP39983 233 aa5.82□□□□□ -1.48
PRE3YJL001W GCD14P46959 383 aaPredicted RBP5.82□□□□□ -1.48
PRE3YJL001W APT1P49435 187 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W PRP31P49704 494 aaPredicted RBP5.82□□□□□ -1.48
PRE3YJL001W SPT20P50875 604 aa5.82□□□□□ -1.48
PRE3YJL001W ROG1P53118 685 aa5.82□□□□□ -1.48
PRE3YJL001W HOL1P53389 586 aa5.82□□□□□ -1.48
PRE3YJL001W TAF12Q03761 539 aa5.82□□□□□ -1.48
PRE3YJL001W YLR224WQ05947 369 aa5.82□□□□□ -1.48
PRE3YJL001W RRP40Q08285 240 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W YLR049CQ12110 428 aa5.82□□□□□ -1.48
PRE3YJL001W YMR030W-AQ3E760 96 aa5.82□□□□□ -1.48
PRE3YJL001W RPS13P05756 151 aaKnown RBP5.81□□□□□ -1.48
PRE3YJL001W HEM15P16622 393 aa5.81□□□□□ -1.48
PRE3YJL001W PRP4P20053 465 aaKnown RBP5.81□□□□□ -1.48
PRE3YJL001W CRM1P30822 1084 aaKnown RBP5.81□□□□□ -1.48
PRE3YJL001W NUP120P35729 1037 aa5.81□□□□□ -1.48
PRE3YJL001W APT2P36973 181 aa5.81□□□□□ -1.48
PRE3YJL001W OM14P38325 134 aa5.81□□□□□ -1.48
PRE3YJL001W ICE2P40499 491 aa5.81□□□□□ -1.48
PRE3YJL001W SEC28P40509 296 aaKnown RBP5.81□□□□□ -1.48
PRE3YJL001W RPL10P41805 221 aaKnown RBP5.81□□□□□ -1.48
PRE3YJL001W YMR210WQ03649 449 aa5.81□□□□□ -1.48
PRE3YJL001W BOP2Q06150 570 aa5.81□□□□□ -1.48
PRE3YJL001W YPL245WQ12179 454 aaKnown RBP5.81□□□□□ -1.48
PRE3YJL001W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
PRE3YJL001W KCS1Q12494 1050 aa5.81□□□□□ -1.48
PRE3YJL001W GAL1P04385 528 aa5.8□□□□□ -1.48
PRE3YJL001W PHO2P07269 559 aa5.8□□□□□ -1.48
PRE3YJL001W SPO16P17122 198 aa5.8□□□□□ -1.48
PRE3YJL001W STP22P25604 385 aa5.8□□□□□ -1.48
PRE3YJL001W ASC1P38011 319 aaKnown RBP5.8□□□□□ -1.48
PRE3YJL001W HOS4P40480 1083 aa5.8□□□□□ -1.48
PRE3YJL001W IRC24P40580 263 aa5.8□□□□□ -1.48
PRE3YJL001W SHY1P53266 389 aa5.8□□□□□ -1.48
PRE3YJL001W BSC5P53755 489 aa5.8□□□□□ -1.48
PRE3YJL001W YNL260CP53846 198 aa5.8□□□□□ -1.48
PRE3YJL001W OAZ1Q02803 292 aa5.8□□□□□ -1.48
PRE3YJL001W GIP3Q03016 1276 aa5.8□□□□□ -1.48
PRE3YJL001W NHP10Q03435 203 aa5.8□□□□□ -1.48
PRE3YJL001W VTI1Q04338 217 aa5.8□□□□□ -1.48
PRE3YJL001W YMR027WQ04371 470 aa5.8□□□□□ -1.48
PRE3YJL001W RAD34Q06665 692 aa5.8□□□□□ -1.48
PRE3YJL001W PUS9Q12069 462 aa5.8□□□□□ -1.48
PRE3YJL001W COR1P07256 457 aa5.79□□□□□ -1.48
PRE3YJL001W MSS116P15424 664 aaKnown RBP5.79□□□□□ -1.48
PRE3YJL001W GUK1P15454 187 aaKnown RBP5.79□□□□□ -1.48
PRE3YJL001W RPB4P20433 221 aaPredicted RBP5.79□□□□□ -1.48
PRE3YJL001W AMD2P22580 549 aa5.79□□□□□ -1.48
PRE3YJL001W KAR4P25583 335 aa5.79□□□□□ -1.48
PRE3YJL001W PTP2P29461 750 aa5.79□□□□□ -1.48
PRE3YJL001W SIC1P38634 284 aa5.79□□□□□ -1.48
PRE3YJL001W YEL020CP39994 560 aa5.79□□□□□ -1.48
PRE3YJL001W FMP52P40008 231 aa5.79□□□□□ -1.48
PRE3YJL001W YER034WP40022 185 aaKnown RBP5.79□□□□□ -1.48
PRE3YJL001W MAD2P40958 196 aa5.79□□□□□ -1.48
PRE3YJL001W PAC11P40960 533 aa5.79□□□□□ -1.48
PRE3YJL001W SEC27P41811 889 aaKnown RBP5.79□□□□□ -1.48
PRE3YJL001W YNL320WP42840 284 aa5.79□□□□□ -1.48
PRE3YJL001W ATG4P53867 494 aa5.79□□□□□ -1.48
PRE3YJL001W ARG5,6Q01217 863 aa5.79□□□□□ -1.48
PRE3YJL001W YLR177WQ06251 628 aa5.79□□□□□ -1.48
PRE3YJL001W MDM32Q12171 622 aa5.79□□□□□ -1.48
PRE3YJL001W MDY2Q12285 212 aa5.79□□□□□ -1.48
PRE3YJL001W RPS17AP02407 136 aaKnown RBP5.78□□□□□ -1.48
PRE3YJL001W RPB2P08518 1224 aaKnown RBP5.78□□□□□ -1.48
PRE3YJL001W SSC1P0CS90 654 aaKnown RBP5.78□□□□□ -1.48
PRE3YJL001W GCY1P14065 312 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PRE3YJL001W RPS17BP14127 136 aaKnown RBP5.78□□□□□ -1.48
PRE3YJL001W TRX3P25372 127 aa5.78□□□□□ -1.48
PRE3YJL001W SPS22P25380 463 aa5.78□□□□□ -1.48
PRE3YJL001W DCG1P32460 244 aa5.78□□□□□ -1.48
PRE3YJL001W KRE6P32486 720 aa5.78□□□□□ -1.48
PRE3YJL001W OAR1P35731 278 aa5.78□□□□□ -1.48
PRE3YJL001W CBP4P37267 147 aa5.78□□□□□ -1.48
PRE3YJL001W RPP1P38786 293 aa5.78□□□□□ -1.48
PRE3YJL001W FRT2P39734 528 aa5.78□□□□□ -1.48
PRE3YJL001W VPS52P39904 641 aa5.78□□□□□ -1.48
PRE3YJL001W UTP25P40498 721 aaKnown RBP5.78□□□□□ -1.48
PRE3YJL001W CAB2P40506 365 aa5.78□□□□□ -1.48
PRE3YJL001W PMT4P46971 762 aa5.78□□□□□ -1.48
PRE3YJL001W BNA3P47039 444 aaKnown RBP5.78□□□□□ -1.48
PRE3YJL001W TEL2P53038 688 aa5.78□□□□□ -1.48
PRE3YJL001W ATG21Q02887 496 aa5.78□□□□□ -1.48
PRE3YJL001W CSN9Q03981 162 aa5.78□□□□□ -1.48
PRE3YJL001W MLC2Q06580 163 aa5.78□□□□□ -1.48
PRE3YJL001W REX4Q08237 289 aa5.78□□□□□ -1.48
PRE3YJL001W YPL247CQ12523 523 aa5.78□□□□□ -1.48
PRE3YJL001W DYN1P36022 4092 aa5.78□□□□□ -1.48
PRE3YJL001W SOD2P00447 233 aa5.77□□□□□ -1.49
PRE3YJL001W PET123P17558 318 aa5.77□□□□□ -1.49
PRE3YJL001W VPS33P20795 691 aa5.77□□□□□ -1.49
PRE3YJL001W GAS1P22146 559 aaKnown RBP5.77□□□□□ -1.49
PRE3YJL001W CMK1P27466 446 aaKnown RBP5.77□□□□□ -1.49
PRE3YJL001W SSH4P32343 579 aa5.77□□□□□ -1.49
PRE3YJL001W UBC6P33296 250 aaPredicted RBP5.77□□□□□ -1.49
PRE3YJL001W CBF5P33322 483 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
PRE3YJL001W RRN3P36070 627 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms