RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	CLD1	P53264	445 aa		0.63	□□□□□ -2.31
APQ12	YIL040W	YIF1	P53845	314 aa	Known RBP	0.63	□□□□□ -2.31
APQ12	YIL040W	MDM36	Q06820	579 aa		0.63	□□□□□ -2.31
APQ12	YIL040W	RAX1	Q08760	435 aa		0.63	□□□□□ -2.31
APQ12	YIL040W	RIM20	Q12033	661 aa		0.63	□□□□□ -2.31
APQ12	YIL040W	SEC39	Q12745	709 aa		0.63	□□□□□ -2.31
APQ12	YIL040W	ILV5	P06168	395 aa	Known RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
APQ12	YIL040W	CTR86	P25355	563 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	PHA2	P32452	334 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	COX13	P32799	129 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	AST1	P35183	429 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	MAM33	P40513	266 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	LYS14	P40971	790 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	HAC1	P41546	238 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	VTC2	P43585	828 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	COQ5	P49017	307 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	KTR5	P53966	522 aa	Predicted RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	RPT6	Q01939	405 aa	Known RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	RPL21A	Q02753	160 aa	Known RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	TAP42	Q04372	366 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	YLR345W	Q06137	509 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	RRP9	Q06506	573 aa	Known RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	SMC5	Q08204	1093 aa		0.62	□□□□□ -2.31
APQ12	YIL040W	TIR4	Q12218	487 aa	Predicted RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	RPL21B	Q12672	160 aa	Known RBP	0.62	□□□□□ -2.31
APQ12	YIL040W	CDC16	P09798	840 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	SPS4	P09937	338 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	SCH9	P11792	824 aa	Known RBP	0.61	□□□□□ -2.31
APQ12	YIL040W	SPO12	P17123	173 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	CLN1	P20437	546 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	SAG1	P20840	650 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	IDH2	P28241	369 aa	Known RBP	0.61	□□□□□ -2.31
APQ12	YIL040W	SCC4	P40090	624 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	ESL1	P40456	1118 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	AIM24	P47127	394 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	HST4	P53688	370 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	ZRG17	P53735	605 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	ALF1	P53904	254 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	GIR2	Q03768	265 aa	Predicted RBP	0.61	□□□□□ -2.31
APQ12	YIL040W	MFG1	Q07684	458 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	SRL2	Q12020	392 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	RCN2	Q12044	265 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	TPT1	Q12272	230 aa	Known RBP	0.61	□□□□□ -2.31
APQ12	YIL040W	CEX1	Q12453	761 aa		0.61	□□□□□ -2.31
APQ12	YIL040W	GPH1	P06738	902 aa	Known RBP	0.6	□□□□□ -2.31
APQ12	YIL040W	SEC53	P07283	254 aa	Known RBP	0.6	□□□□□ -2.31
APQ12	YIL040W	YCL068C	P25593	260 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	SIN4	P32259	974 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	TFB1	P32776	642 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.6	□□□□□ -2.31	not detected
APQ12	YIL040W	SRB2	P34162	210 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	HEL1	P36113	551 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	PFS1	P38872	237 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	FHL1	P39521	936 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	YNL208W	P40159	199 aa	Known RBP	0.6	□□□□□ -2.31
APQ12	YIL040W	SAS2	P40963	338 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	LCB3	P47013	409 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	NRM1	P53718	249 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	GPI15	P53961	229 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	OAZ1	Q02803	292 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	LOT6	Q07923	191 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	EAF3	Q12432	401 aa		0.6	□□□□□ -2.31
APQ12	YIL040W	STE7	P06784	515 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	RIP1	P08067	215 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	CBS1	P14066	229 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	SEC63	P14906	663 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	DPH5	P32469	300 aa	Predicted RBP	0.59	□□□□□ -2.31
APQ12	YIL040W	SEC66	P33754	206 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	CST26	P38226	397 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	YHK8	P38776	514 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	PEX22	P39718	180 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	IES5	P40060	125 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	VMA13	P41807	478 aa	Known RBP	0.59	□□□□□ -2.31
APQ12	YIL040W	YJR011C	P47086	261 aa	Predicted RBP	0.59	□□□□□ -2.31
APQ12	YIL040W	TWF1	P53250	332 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	FAR10	Q06001	478 aa		0.59	□□□□□ -2.31
APQ12	YIL040W	YML133C	Q03099	1374 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	YLL067C	Q07888	1374 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	YLL066C	Q99208	1374 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	FOB1	O13329	566 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ASP3-2	P0CX77	362 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ASP3-3	P0CX78	362 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ASP3-4	P0CX79	362 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ASP3-1	P0CZ17	362 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ZIP1	P31111	875 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	YPS1	P32329	569 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ATG12	P38316	186 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	VHC1	P38329	1120 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	ECM34	P38728	170 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	TRR2	P38816	342 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	YAL037W	P39728	267 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	AIP1	P46680	615 aa	Known RBP	0.58	□□□□□ -2.32
APQ12	YIL040W	YJR030C	P47101	745 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	PHB2	P50085	310 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	YGR250C	P53316	781 aa	Known RBP	0.58	□□□□□ -2.32
APQ12	YIL040W	TDA1	Q03533	586 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	CCE1	Q03702	353 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	TAF12	Q03761	539 aa		0.58	□□□□□ -2.32
APQ12	YIL040W	PRM6	Q04705	352 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms