RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W BAT1P38891 393 aaKnown RBP2.23□□□□□ -2.05
RPF1YHR088W PFS2P42841 465 aaKnown RBP2.23□□□□□ -2.05
RPF1YHR088W YFL012WP43580 148 aa2.23□□□□□ -2.05
RPF1YHR088W FMS1P50264 508 aa2.23□□□□□ -2.05
RPF1YHR088W YGR018CP53211 109 aa2.23□□□□□ -2.05
RPF1YHR088W CLD1P53264 445 aa2.23□□□□□ -2.05
RPF1YHR088W ALF1P53904 254 aa2.23□□□□□ -2.05
RPF1YHR088W GPI15P53961 229 aa2.23□□□□□ -2.05
RPF1YHR088W KTR5P53966 522 aaPredicted RBP2.23□□□□□ -2.05
RPF1YHR088W VTA1Q06263 330 aa2.23□□□□□ -2.05
RPF1YHR088W SRL2Q12020 392 aa2.23□□□□□ -2.05
RPF1YHR088W RIM20Q12033 661 aa2.23□□□□□ -2.05
RPF1YHR088W FOL3Q12676 427 aaPredicted RBP2.23□□□□□ -2.05
RPF1YHR088W ILV5P06168 395 aaKnown RBP2.22□□□□□ -2.05
RPF1YHR088W SPO12P17123 173 aa2.22□□□□□ -2.05
RPF1YHR088W SBE22P38814 852 aa2.22□□□□□ -2.05
RPF1YHR088W UTP9P38882 575 aaKnown RBP2.22□□□□□ -2.05
RPF1YHR088W YAL037WP39728 267 aa2.22□□□□□ -2.05
RPF1YHR088W MET18P40469 1032 aa2.22□□□□□ -2.05
RPF1YHR088W MAM33P40513 266 aa2.22□□□□□ -2.05
RPF1YHR088W YIP5P53108 310 aa2.22□□□□□ -2.05
RPF1YHR088W JJJ1P53863 590 aa2.22□□□□□ -2.05
RPF1YHR088W RPT6Q01939 405 aaKnown RBP2.22□□□□□ -2.05
RPF1YHR088W IMH1Q06704 911 aaKnown RBP2.22□□□□□ -2.05
RPF1YHR088W MDM36Q06820 579 aa2.22□□□□□ -2.05
RPF1YHR088W MCH1Q07376 486 aa2.22□□□□□ -2.05
RPF1YHR088W KRE2P27809 442 aa2.21□□□□□ -2.06
RPF1YHR088W IMP2'P32351 346 aa2.21□□□□□ -2.06
RPF1YHR088W HAC1P41546 238 aa2.21□□□□□ -2.06
RPF1YHR088W ATG18P43601 500 aa2.21□□□□□ -2.06
RPF1YHR088W ATP22P50273 684 aaPredicted RBP2.21□□□□□ -2.06
RPF1YHR088W MRM2P53123 320 aa2.21□□□□□ -2.06
RPF1YHR088W HST1P53685 503 aa2.21□□□□□ -2.06
RPF1YHR088W OAZ1Q02803 292 aa2.21□□□□□ -2.06
RPF1YHR088W LOT6Q07923 191 aa2.21□□□□□ -2.06
RPF1YHR088W SMC5Q08204 1093 aa2.21□□□□□ -2.06
RPF1YHR088W CLC1P17891 233 aa2.2□□□□□ -2.06
RPF1YHR088W YCL068CP25593 260 aa2.2□□□□□ -2.06
RPF1YHR088W PHA2P32452 334 aa2.2□□□□□ -2.06
RPF1YHR088W ZUO1P32527 433 aaKnown RBP2.2□□□□□ -2.06
RPF1YHR088W IME2P32581 645 aa2.2□□□□□ -2.06
RPF1YHR088W SPO22P40511 975 aa2.2□□□□□ -2.06
RPF1YHR088W BNS1P50084 137 aa2.2□□□□□ -2.06
RPF1YHR088W YGL262WP53054 175 aa2.2□□□□□ -2.06
RPF1YHR088W PIN3Q06449 215 aa2.2□□□□□ -2.06
RPF1YHR088W RKM1Q08961 583 aaPredicted RBP2.2□□□□□ -2.06
RPF1YHR088W DEP1P31385 405 aa2.19□□□□□ -2.06
RPF1YHR088W ANR2P36090 516 aaPredicted RBP2.19□□□□□ -2.06
RPF1YHR088W AIM24P47127 394 aa2.19□□□□□ -2.06
RPF1YHR088W GIP3Q03016 1276 aa2.19□□□□□ -2.06
RPF1YHR088W YMR102CQ03177 834 aa2.19□□□□□ -2.06
RPF1YHR088W RRP9Q06506 573 aaKnown RBP2.19□□□□□ -2.06
RPF1YHR088W BUG1Q12191 341 aa2.19□□□□□ -2.06
RPF1YHR088W MET8P15807 274 aa2.18□□□□□ -2.06
RPF1YHR088W ZRC1P20107 442 aa2.18□□□□□ -2.06
RPF1YHR088W TFB1P32776 642 aa2.18□□□□□ -2.06
RPF1YHR088W APE3P37302 537 aaKnown RBP2.18□□□□□ -2.06
RPF1YHR088W RCK2P38623 610 aa2.18□□□□□ -2.06
RPF1YHR088W PTI1P39927 425 aaPredicted RBP2.18□□□□□ -2.06
RPF1YHR088W VID27P40157 782 aa2.18□□□□□ -2.06
RPF1YHR088W ARF3P40994 183 aaRIP-Chip data2.18□□□□□ -2.06not detected
RPF1YHR088W RPS0BP46654 252 aaKnown RBP2.18□□□□□ -2.06
RPF1YHR088W MDM30Q05930 598 aa2.18□□□□□ -2.06
RPF1YHR088W NAG1Q8TGN9 163 aa2.18□□□□□ -2.06
RPF1YHR088W SCEIP03882 235 aa2.17□□□□□ -2.06
RPF1YHR088W PPH22P23595 377 aa2.17□□□□□ -2.06
RPF1YHR088W RHB1P25378 209 aa2.17□□□□□ -2.06
RPF1YHR088W GPI10P30777 616 aa2.17□□□□□ -2.06
RPF1YHR088W TPS2P31688 896 aaKnown RBP2.17□□□□□ -2.06
RPF1YHR088W HXT3P32466 567 aaKnown RBP2.17□□□□□ -2.06
RPF1YHR088W COX13P32799 129 aa2.17□□□□□ -2.06
RPF1YHR088W MRPL27P36526 146 aaPredicted RBP2.17□□□□□ -2.06
RPF1YHR088W PFF1P38244 976 aa2.17□□□□□ -2.06
RPF1YHR088W EGT2P42835 1041 aa2.17□□□□□ -2.06
RPF1YHR088W DIA1P54005 336 aa2.17□□□□□ -2.06
RPF1YHR088W SKI8Q02793 397 aaPredicted RBP2.17□□□□□ -2.06
RPF1YHR088W SVL3Q03088 825 aaKnown RBP2.17□□□□□ -2.06
RPF1YHR088W ATG34Q12292 412 aa2.17□□□□□ -2.06
RPF1YHR088W CEX1Q12453 761 aa2.17□□□□□ -2.06
RPF1YHR088W ECT1P33412 323 aa2.16□□□□□ -2.06
RPF1YHR088W YNL208WP40159 199 aaKnown RBP2.16□□□□□ -2.06
RPF1YHR088W PGU1P47180 361 aa2.16□□□□□ -2.06
RPF1YHR088W PHB2P50085 310 aa2.16□□□□□ -2.06
RPF1YHR088W MNP1P53163 194 aaPredicted RBP2.16□□□□□ -2.06
RPF1YHR088W CCE1Q03702 353 aa2.16□□□□□ -2.06
RPF1YHR088W PRM6Q04705 352 aa2.16□□□□□ -2.06
RPF1YHR088W EAF3Q12432 401 aa2.16□□□□□ -2.06
RPF1YHR088W PIS1P06197 220 aaKnown RBP2.15□□□□□ -2.07
RPF1YHR088W MAS2P11914 482 aa2.15□□□□□ -2.07
RPF1YHR088W YEF1P32622 495 aa2.15□□□□□ -2.07
RPF1YHR088W RRP4P38792 359 aaKnown RBP2.15□□□□□ -2.07
RPF1YHR088W IGD1P43598 195 aa2.15□□□□□ -2.07
RPF1YHR088W AIP1P46680 615 aaKnown RBP2.15□□□□□ -2.07
RPF1YHR088W URH1Q04179 340 aa2.15□□□□□ -2.07
RPF1YHR088W RRP45Q05636 305 aaKnown RBP2.15□□□□□ -2.07
RPF1YHR088W TPI1P00942 248 aaKnown RBP2.14□□□□□ -2.07
RPF1YHR088W GEX1P25596 615 aa2.14□□□□□ -2.07
RPF1YHR088W SOR1P35497 357 aaKnown RBP2.14□□□□□ -2.07
RPF1YHR088W ATP3P38077 311 aaKnown RBP2.14□□□□□ -2.07
RPF1YHR088W YBR056WP38081 501 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms