RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W AXL1P40851 1208 aa6.06□□□□□ -1.44
MSP1YGR028W SEC10Q06245 871 aa6.06□□□□□ -1.44
MSP1YGR028W BRR1Q99177 341 aaPredicted RBP6.06□□□□□ -1.44
MSP1YGR028W ALG7P07286 448 aa6.05□□□□□ -1.44
MSP1YGR028W TRX3P25372 127 aa6.05□□□□□ -1.44
MSP1YGR028W SRB5P32585 307 aa6.05□□□□□ -1.44
MSP1YGR028W CBF5P33322 483 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
MSP1YGR028W RRN3P36070 627 aa6.05□□□□□ -1.44
MSP1YGR028W YER034WP40022 185 aaKnown RBP6.05□□□□□ -1.44
MSP1YGR028W APQ12P40532 138 aa6.05□□□□□ -1.44
MSP1YGR028W YPT32P51996 222 aaKnown RBP6.05□□□□□ -1.44
MSP1YGR028W USA1Q03714 838 aa6.05□□□□□ -1.44
MSP1YGR028W YOL159CQ08300 171 aa6.05□□□□□ -1.44
MSP1YGR028W RUD3Q12234 484 aaKnown RBP6.05□□□□□ -1.44
MSP1YGR028W IPP1P00817 287 aaKnown RBP6.04□□□□□ -1.44
MSP1YGR028W LEU4P06208 619 aaKnown RBP6.04□□□□□ -1.44
MSP1YGR028W UTP9P38882 575 aaKnown RBP6.04□□□□□ -1.44
MSP1YGR028W AXL2P38928 823 aa6.04□□□□□ -1.44
MSP1YGR028W SAP1P39955 897 aaKnown RBP6.04□□□□□ -1.44
MSP1YGR028W COA1P40452 197 aa6.04□□□□□ -1.44
MSP1YGR028W PAC11P40960 533 aa6.04□□□□□ -1.44
MSP1YGR028W RPL10P41805 221 aaKnown RBP6.04□□□□□ -1.44
MSP1YGR028W PAN2P53010 1115 aaPredicted RBP6.04□□□□□ -1.44
MSP1YGR028W ROG1P53118 685 aa6.04□□□□□ -1.44
MSP1YGR028W UBX4P54730 416 aa6.04□□□□□ -1.44
MSP1YGR028W BOP2Q06150 570 aa6.04□□□□□ -1.44
MSP1YGR028W RRP40Q08285 240 aaKnown RBP6.04□□□□□ -1.44
MSP1YGR028W VHS3Q08438 674 aa6.04□□□□□ -1.44
MSP1YGR028W FRE5Q08908 694 aa6.04□□□□□ -1.44
MSP1YGR028W SGV1P23293 657 aaKnown RBP6.03□□□□□ -1.44
MSP1YGR028W MGR1P25573 417 aa6.03□□□□□ -1.44
MSP1YGR028W PCL2P25693 308 aa6.03□□□□□ -1.44
MSP1YGR028W ZIP1P31111 875 aa6.03□□□□□ -1.44
MSP1YGR028W ERG1P32476 496 aaKnown RBP6.03□□□□□ -1.44
MSP1YGR028W UGP1P32861 499 aaKnown RBP6.03□□□□□ -1.44
MSP1YGR028W RMA1P36001 430 aaKnown RBP6.03□□□□□ -1.44
MSP1YGR028W YDR089WP38966 869 aa6.03□□□□□ -1.44
MSP1YGR028W FMP52P40008 231 aa6.03□□□□□ -1.44
MSP1YGR028W YJR154WP47181 346 aa6.03□□□□□ -1.44
MSP1YGR028W MUP1P50276 574 aa6.03□□□□□ -1.44
MSP1YGR028W IST1P53843 298 aaPredicted RBP6.03□□□□□ -1.44
MSP1YGR028W LSM3P57743 89 aaKnown RBP6.03□□□□□ -1.44
MSP1YGR028W YOL024WQ08172 172 aa6.03□□□□□ -1.44
MSP1YGR028W YPL272CQ08984 517 aa6.03□□□□□ -1.44
MSP1YGR028W HSP42Q12329 375 aa6.03□□□□□ -1.44
MSP1YGR028W SPT3P06844 337 aa6.02□□□□□ -1.45
MSP1YGR028W ILV6P25605 309 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W TAH1P25638 111 aaPredicted RBP6.02□□□□□ -1.45
MSP1YGR028W CPR3P25719 182 aa6.02□□□□□ -1.45
MSP1YGR028W CDC5P32562 705 aa6.02□□□□□ -1.45
MSP1YGR028W SUI1P32911 108 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W OAR1P35731 278 aa6.02□□□□□ -1.45
MSP1YGR028W RPS27AP35997 82 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W RPS27BP38711 82 aa6.02□□□□□ -1.45
MSP1YGR028W OAF1P39720 1047 aaPredicted RBP6.02□□□□□ -1.45
MSP1YGR028W ARB1P40024 610 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W YIL152WP40455 235 aa6.02□□□□□ -1.45
MSP1YGR028W FAR3P46671 204 aa6.02□□□□□ -1.45
MSP1YGR028W YGR250CP53316 781 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W LSC1P53598 329 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W GIP3Q03016 1276 aa6.02□□□□□ -1.45
MSP1YGR028W GAD1Q04792 585 aa6.02□□□□□ -1.45
MSP1YGR028W MDM30Q05930 598 aa6.02□□□□□ -1.45
MSP1YGR028W OMS1Q06668 471 aa6.02□□□□□ -1.45
MSP1YGR028W ENT4Q07872 247 aa6.02□□□□□ -1.45
MSP1YGR028W TMS1Q12116 473 aa6.02□□□□□ -1.45
MSP1YGR028W RUP1Q12242 671 aa6.02□□□□□ -1.45
MSP1YGR028W AHA1Q12449 350 aaKnown RBP6.02□□□□□ -1.45
MSP1YGR028W YPR064WQ12492 139 aa6.02□□□□□ -1.45
MSP1YGR028W MHT1Q12525 324 aa6.02□□□□□ -1.45
MSP1YGR028W STT4P37297 1900 aa6.01□□□□□ -1.45
MSP1YGR028W COX1P00401 534 aa6.01□□□□□ -1.45
MSP1YGR028W COR1P07256 457 aa6.01□□□□□ -1.45
MSP1YGR028W DST1P07273 309 aa6.01□□□□□ -1.45
MSP1YGR028W HOM3P10869 527 aa6.01□□□□□ -1.45
MSP1YGR028W NMT1P14743 455 aa6.01□□□□□ -1.45
MSP1YGR028W NAM9P27929 486 aa6.01□□□□□ -1.45
MSP1YGR028W FAA1P30624 700 aaKnown RBP6.01□□□□□ -1.45
MSP1YGR028W PET127P32606 800 aa6.01□□□□□ -1.45
MSP1YGR028W NFU1P32860 256 aa6.01□□□□□ -1.45
MSP1YGR028W ASC1P38011 319 aaKnown RBP6.01□□□□□ -1.45
MSP1YGR028W RIM2P38127 377 aa6.01□□□□□ -1.45
MSP1YGR028W BMT2P38278 337 aa6.01□□□□□ -1.45
MSP1YGR028W YHR112CP38716 378 aa6.01□□□□□ -1.45
MSP1YGR028W LIN1P38852 340 aaPredicted RBP6.01□□□□□ -1.45
MSP1YGR028W MAD2P40958 196 aa6.01□□□□□ -1.45
MSP1YGR028W HOC1P47124 396 aa6.01□□□□□ -1.45
MSP1YGR028W TEL2P53038 688 aa6.01□□□□□ -1.45
MSP1YGR028W SLI1P53304 468 aa6.01□□□□□ -1.45
MSP1YGR028W ERG13P54839 491 aaKnown RBP6.01□□□□□ -1.45
MSP1YGR028W PRP38Q00723 242 aaPredicted RBP6.01□□□□□ -1.45
MSP1YGR028W TIM44Q01852 431 aa6.01□□□□□ -1.45
MSP1YGR028W MET31Q03081 177 aa6.01□□□□□ -1.45
MSP1YGR028W YML131WQ03102 365 aa6.01□□□□□ -1.45
MSP1YGR028W YET2Q04210 160 aa6.01□□□□□ -1.45
MSP1YGR028W PDR8Q06149 701 aa6.01□□□□□ -1.45
MSP1YGR028W ATG33Q06485 197 aa6.01□□□□□ -1.45
MSP1YGR028W ACF2Q12168 779 aa6.01□□□□□ -1.45
MSP1YGR028W YPT1P01123 206 aaKnown RBP6□□□□□ -1.45
MSP1YGR028W RHO2P06781 192 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms