RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W YDR262WQ12331 272 aa2.08□□□□□ -2.08
BRP1YGL007W YLR302CO13544 120 aa2.07□□□□□ -2.08
BRP1YGL007W ATP2P00830 511 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W CMD1P06787 147 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W GAL7P08431 366 aa2.07□□□□□ -2.08
BRP1YGL007W ILS1P09436 1072 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W YAR066WP0CX18 203 aa2.07□□□□□ -2.08
BRP1YGL007W YHR214WP0CX19 203 aa2.07□□□□□ -2.08
BRP1YGL007W NSP1P14907 823 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W CDC43P18898 376 aa2.07□□□□□ -2.08
BRP1YGL007W VPS33P20795 691 aa2.07□□□□□ -2.08
BRP1YGL007W SEC15P22224 910 aa2.07□□□□□ -2.08
BRP1YGL007W AAD3P25612 363 aa2.07□□□□□ -2.08
BRP1YGL007W ERG3P32353 365 aa2.07□□□□□ -2.08
BRP1YGL007W TOA1P32773 286 aa2.07□□□□□ -2.08
BRP1YGL007W MGM101P32787 269 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W NPL6P32832 435 aa2.07□□□□□ -2.08
BRP1YGL007W PEX5P35056 612 aa2.07□□□□□ -2.08
BRP1YGL007W YPT52P36018 234 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W LAS1P36146 502 aaPredicted RBP2.07□□□□□ -2.08
BRP1YGL007W RPF2P36160 344 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W SOL2P37262 315 aa2.07□□□□□ -2.08
BRP1YGL007W MAK5P38112 773 aaPredicted RBP2.07□□□□□ -2.08
BRP1YGL007W TRM7P38238 310 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W SIC1P38634 284 aa2.07□□□□□ -2.08
BRP1YGL007W CCT4P39078 528 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W HAT2P39984 401 aa2.07□□□□□ -2.08
BRP1YGL007W GIM4P40005 111 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W LSM5P40089 93 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W MEP1P40260 492 aa2.07□□□□□ -2.08
BRP1YGL007W NDC80P40460 691 aa2.07□□□□□ -2.08
BRP1YGL007W ALK1P43633 760 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W TIS11P47977 285 aa2.07□□□□□ -2.08
BRP1YGL007W MUP1P50276 574 aa2.07□□□□□ -2.08
BRP1YGL007W TEL2P53038 688 aa2.07□□□□□ -2.08
BRP1YGL007W MPS2P53159 387 aa2.07□□□□□ -2.08
BRP1YGL007W YGR054WP53235 642 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W BUD32P53323 261 aa2.07□□□□□ -2.08
BRP1YGL007W MAL13P53338 473 aa2.07□□□□□ -2.08
BRP1YGL007W CSL4P53859 292 aaPredicted RBP2.07□□□□□ -2.08
BRP1YGL007W AAT1Q01802 451 aa2.07□□□□□ -2.08
BRP1YGL007W OSH6Q02201 448 aa2.07□□□□□ -2.08
BRP1YGL007W RAD30Q04049 632 aa2.07□□□□□ -2.08
BRP1YGL007W BUD22Q04347 519 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W RCO1Q04779 684 aa2.07□□□□□ -2.08
BRP1YGL007W GAD1Q04792 585 aa2.07□□□□□ -2.08
BRP1YGL007W CDC123Q05791 360 aa2.07□□□□□ -2.08
BRP1YGL007W VTA1Q06263 330 aa2.07□□□□□ -2.08
BRP1YGL007W NUS1Q12063 375 aa2.07□□□□□ -2.08
BRP1YGL007W HUA2Q12134 243 aa2.07□□□□□ -2.08
BRP1YGL007W RIO1Q12196 484 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W YOL107WQ12239 342 aa2.07□□□□□ -2.08
BRP1YGL007W HSP42Q12329 375 aa2.07□□□□□ -2.08
BRP1YGL007W SCM3Q12334 223 aa2.07□□□□□ -2.08
BRP1YGL007W PST1Q12355 444 aa2.07□□□□□ -2.08
BRP1YGL007W RRP12Q12754 1228 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W YBR126W-AQ8TGU7 68 aa2.07□□□□□ -2.08
BRP1YGL007W PNO1Q99216 274 aaKnown RBP2.07□□□□□ -2.08
BRP1YGL007W PET111P08468 800 aa2.06□□□□□ -2.08
BRP1YGL007W TY2A-LR1P0C2J4 438 aa2.06□□□□□ -2.08
BRP1YGL007W TY2A-FP0CX61 438 aa2.06□□□□□ -2.08
BRP1YGL007W TY2A-GR2P0CX62 438 aa2.06□□□□□ -2.08
BRP1YGL007W PET122P10355 254 aa2.06□□□□□ -2.08
BRP1YGL007W GPA2P10823 449 aa2.06□□□□□ -2.08
BRP1YGL007W PRP16P15938 1071 aaPredicted RBP2.06□□□□□ -2.08
BRP1YGL007W PDX1P16451 410 aa2.06□□□□□ -2.08
BRP1YGL007W TY2A-CP25383 438 aa2.06□□□□□ -2.08
BRP1YGL007W IMG1P25626 169 aa2.06□□□□□ -2.08
BRP1YGL007W SIN4P32259 974 aa2.06□□□□□ -2.08
BRP1YGL007W NTH1P32356 751 aa2.06□□□□□ -2.08
BRP1YGL007W ATP11P32453 318 aa2.06□□□□□ -2.08
BRP1YGL007W YEL043WP32618 956 aa2.06□□□□□ -2.08
BRP1YGL007W UBC6P33296 250 aaPredicted RBP2.06□□□□□ -2.08
BRP1YGL007W SFC1P33303 322 aa2.06□□□□□ -2.08
BRP1YGL007W NTR2P36118 322 aaPredicted RBP2.06□□□□□ -2.08
BRP1YGL007W APT2P36973 181 aa2.06□□□□□ -2.08
BRP1YGL007W MUP3P38734 546 aa2.06□□□□□ -2.08
BRP1YGL007W YHR045WP38775 560 aa2.06□□□□□ -2.08
BRP1YGL007W YHR097CP38809 366 aaKnown RBP2.06□□□□□ -2.08
BRP1YGL007W YHR182WP38870 785 aa2.06□□□□□ -2.08
BRP1YGL007W HRB1P38922 454 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
BRP1YGL007W GGC1P38988 300 aa2.06□□□□□ -2.08
BRP1YGL007W YJL193WP39542 402 aa2.06□□□□□ -2.08
BRP1YGL007W ECM1P39715 212 aa2.06□□□□□ -2.08
BRP1YGL007W VRG4P40107 337 aa2.06□□□□□ -2.08
BRP1YGL007W YIL166CP40445 542 aa2.06□□□□□ -2.08
BRP1YGL007W INA22P40576 216 aa2.06□□□□□ -2.08
BRP1YGL007W BAP3P41815 604 aa2.06□□□□□ -2.08
BRP1YGL007W STB2P46679 850 aa2.06□□□□□ -2.08
BRP1YGL007W BOL2P53082 120 aa2.06□□□□□ -2.08
BRP1YGL007W LCL3P53153 274 aa2.06□□□□□ -2.08
BRP1YGL007W SGF73P53165 657 aa2.06□□□□□ -2.08
BRP1YGL007W YGR015CP53208 328 aa2.06□□□□□ -2.08
BRP1YGL007W FHN1P53279 174 aa2.06□□□□□ -2.08
BRP1YGL007W LSC1P53598 329 aaKnown RBP2.06□□□□□ -2.08
BRP1YGL007W INN1P53901 409 aa2.06□□□□□ -2.08
BRP1YGL007W RSM10Q03201 203 aa2.06□□□□□ -2.08
BRP1YGL007W TY2A-DR2Q03483 438 aa2.06□□□□□ -2.08
BRP1YGL007W VHS1Q03785 461 aa2.06□□□□□ -2.08
BRP1YGL007W RRN11Q04712 507 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms