RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W BMH1P29311 267 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W ATP7P30902 174 aa3.94□□□□□ -1.78
PTR3YFR029W CDC5P32562 705 aa3.94□□□□□ -1.78
PTR3YFR029W GCG1P32656 232 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W TAF14P35189 244 aa3.94□□□□□ -1.78
PTR3YFR029W CBT1P36038 271 aaPredicted RBP3.94□□□□□ -1.78
PTR3YFR029W SNU114P36048 1008 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W AAP1P37898 856 aaKnown RBP3.94□□□□□ -1.78
PTR3YFR029W YPT10P38146 199 aa3.94□□□□□ -1.78
PTR3YFR029W YBR053CP38235 358 aa3.94□□□□□ -1.78
PTR3YFR029W YIR016WP40572 265 aa3.94□□□□□ -1.78
PTR3YFR029W YFR020WP43600 232 aa3.94□□□□□ -1.78
PTR3YFR029W PRY1P47032 299 aa3.94□□□□□ -1.78
PTR3YFR029W KAP114P53067 1004 aa3.94□□□□□ -1.78
PTR3YFR029W GTF1P53260 183 aaPredicted RBP3.94□□□□□ -1.78
PTR3YFR029W YGR127WP53275 312 aa3.94□□□□□ -1.78
PTR3YFR029W MRP51Q02950 344 aa3.94□□□□□ -1.78
PTR3YFR029W VPS60Q03390 229 aa3.94□□□□□ -1.78
PTR3YFR029W HPF1Q05164 967 aa3.94□□□□□ -1.78
PTR3YFR029W DNL4Q08387 944 aaPredicted RBP3.94□□□□□ -1.78
PTR3YFR029W YPL216WQ08964 1102 aa3.94□□□□□ -1.78
PTR3YFR029W YDL177CQ12257 170 aa3.94□□□□□ -1.78
PTR3YFR029W NHP6BP11633 99 aaKnown RBP3.93□□□□□ -1.78
PTR3YFR029W KGD2P19262 463 aaPredicted RBP3.93□□□□□ -1.78
PTR3YFR029W AMD2P22580 549 aa3.93□□□□□ -1.78
PTR3YFR029W KAR4P25583 335 aa3.93□□□□□ -1.78
PTR3YFR029W KRE2P27809 442 aa3.93□□□□□ -1.78
PTR3YFR029W SIN4P32259 974 aa3.93□□□□□ -1.78
PTR3YFR029W PRP18P33411 251 aaPredicted RBP3.93□□□□□ -1.78
PTR3YFR029W SPO23P33757 523 aa3.93□□□□□ -1.78
PTR3YFR029W YKL162CP36052 402 aa3.93□□□□□ -1.78
PTR3YFR029W RRP4P38792 359 aaKnown RBP3.93□□□□□ -1.78
PTR3YFR029W DSE1P40077 573 aa3.93□□□□□ -1.78
PTR3YFR029W ATG27P46989 271 aa3.93□□□□□ -1.78
PTR3YFR029W YDL186WP48568 277 aa3.93□□□□□ -1.78
PTR3YFR029W LIF1P53150 421 aa3.93□□□□□ -1.78
PTR3YFR029W ADE16P54113 591 aaKnown RBP3.93□□□□□ -1.78
PTR3YFR029W IZH1Q03419 316 aa3.93□□□□□ -1.78
PTR3YFR029W RPS10AQ08745 105 aaPredicted RBP3.93□□□□□ -1.78
PTR3YFR029W YOR389WQ08912 624 aa3.93□□□□□ -1.78
PTR3YFR029W BAG7Q12128 409 aa3.93□□□□□ -1.78
PTR3YFR029W RAD7P06779 565 aa3.92□□□□□ -1.78
PTR3YFR029W CBF1P17106 351 aa3.92□□□□□ -1.78
PTR3YFR029W PDE1P22434 369 aa3.92□□□□□ -1.78
PTR3YFR029W TPS2P31688 896 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W CCT4P39078 528 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W ICP55P40051 511 aa3.92□□□□□ -1.78
PTR3YFR029W YER121WP40076 114 aa3.92□□□□□ -1.78
PTR3YFR029W RPS10BP46784 105 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W YJL163CP46996 555 aa3.92□□□□□ -1.78
PTR3YFR029W CTH1P47976 325 aa3.92□□□□□ -1.78
PTR3YFR029W NOP19P53317 196 aaPredicted RBP3.92□□□□□ -1.78
PTR3YFR029W YMR087WQ04299 284 aa3.92□□□□□ -1.78
PTR3YFR029W YMR310CQ04867 317 aaPredicted RBP3.92□□□□□ -1.78
PTR3YFR029W DCR2Q05924 578 aa3.92□□□□□ -1.78
PTR3YFR029W SNT309Q06091 175 aaPredicted RBP3.92□□□□□ -1.78
PTR3YFR029W NSE1Q07913 336 aa3.92□□□□□ -1.78
PTR3YFR029W SDO1Q07953 250 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W YER175W-AQ8TGU4 54 aa3.92□□□□□ -1.78
PTR3YFR029W SPS4P09937 338 aa3.92□□□□□ -1.78
PTR3YFR029W NRP1P32770 719 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
PTR3YFR029W RTC2P38279 296 aa3.92□□□□□ -1.78
PTR3YFR029W MBB1P39534 108 aa3.92□□□□□ -1.78
PTR3YFR029W ECM10P39987 644 aa3.92□□□□□ -1.78
PTR3YFR029W PIG2P40187 538 aa3.92□□□□□ -1.78
PTR3YFR029W SLM1P40485 686 aa3.92□□□□□ -1.78
PTR3YFR029W YRB1P41920 201 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W FAR3P46671 204 aa3.92□□□□□ -1.78
PTR3YFR029W IBA57P47158 497 aa3.92□□□□□ -1.78
PTR3YFR029W SPT20P50875 604 aa3.92□□□□□ -1.78
PTR3YFR029W PMT5P52867 743 aa3.92□□□□□ -1.78
PTR3YFR029W RNT1Q02555 471 aa3.92□□□□□ -1.78
PTR3YFR029W ROT1Q03691 256 aa3.92□□□□□ -1.78
PTR3YFR029W ECM11Q04110 302 aa3.92□□□□□ -1.78
PTR3YFR029W GFD1Q04839 188 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W RIO1Q12196 484 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W NCE102Q12207 173 aaRIP-Chip data3.92□□□□□ -1.78not detected
PTR3YFR029W LSP1Q12230 341 aaKnown RBP3.92□□□□□ -1.78
PTR3YFR029W TRM13Q12383 476 aa3.92□□□□□ -1.78
PTR3YFR029W THP2O13539 261 aaKnown RBP3.91□□□□□ -1.78
PTR3YFR029W SIR3P06701 978 aa3.91□□□□□ -1.78
PTR3YFR029W COR1P07256 457 aa3.91□□□□□ -1.78
PTR3YFR029W PET494P07390 489 aaPredicted RBP3.91□□□□□ -1.78
PTR3YFR029W RPS24AP0CX31 135 aaKnown RBP3.91□□□□□ -1.78
PTR3YFR029W RPS24BP0CX32 135 aaKnown RBP3.91□□□□□ -1.78
PTR3YFR029W RPO26P20435 155 aa3.91□□□□□ -1.78
PTR3YFR029W CNA1P23287 553 aa3.91□□□□□ -1.78
PTR3YFR029W SGV1P23293 657 aaKnown RBP3.91□□□□□ -1.78
PTR3YFR029W DBR1P24309 405 aaKnown RBP3.91□□□□□ -1.78
PTR3YFR029W RRT12P25381 491 aa3.91□□□□□ -1.78
PTR3YFR029W CSM1P25651 190 aa3.91□□□□□ -1.78
PTR3YFR029W CNE1P27825 502 aa3.91□□□□□ -1.78
PTR3YFR029W PRR1P28708 518 aa3.91□□□□□ -1.78
PTR3YFR029W MEI4P29467 408 aa3.91□□□□□ -1.78
PTR3YFR029W SPT10P35208 640 aa3.91□□□□□ -1.78
PTR3YFR029W HES1P35843 434 aa3.91□□□□□ -1.78
PTR3YFR029W PRS4P38063 326 aaPredicted RBP3.91□□□□□ -1.78
PTR3YFR029W MIC12P38341 106 aa3.91□□□□□ -1.78
PTR3YFR029W SPC97P38863 823 aa3.91□□□□□ -1.78
PTR3YFR029W UIP3P39547 235 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms