RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC5, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC5	YDR059C	HXT3	P32466	567 aa	Known RBP	2.79	□□□□□ -1.96
UBC5	YDR059C	SWE1	P32944	819 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	RRP1	P35178	278 aa	Predicted RBP	2.79	□□□□□ -1.96
UBC5	YDR059C	COX14	P39103	70 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	YAL037W	P39728	267 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	BNS1	P50084	137 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	PHB2	P50085	310 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	RTN1	Q04947	295 aa	Known RBP	2.79	□□□□□ -1.96
UBC5	YDR059C	MDM30	Q05930	598 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	RAX1	Q08760	435 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	TPT1	Q12272	230 aa	Known RBP	2.79	□□□□□ -1.96
UBC5	YDR059C	CCH1	P50077	2039 aa		2.79	□□□□□ -1.96
UBC5	YDR059C	CDC50	P25656	391 aa		2.78	□□□□□ -1.96
UBC5	YDR059C	KRE2	P27809	442 aa		2.78	□□□□□ -1.96
UBC5	YDR059C	ATG18	P43601	500 aa		2.78	□□□□□ -1.96
UBC5	YDR059C	PGU1	P47180	361 aa		2.78	□□□□□ -1.96
UBC5	YDR059C	VTA1	Q06263	330 aa		2.78	□□□□□ -1.96
UBC5	YDR059C	PHA2	P32452	334 aa		2.77	□□□□□ -1.97
UBC5	YDR059C	APE3	P37302	537 aa	Known RBP	2.77	□□□□□ -1.97
UBC5	YDR059C	DTR1	P38125	572 aa		2.77	□□□□□ -1.97
UBC5	YDR059C	OTU2	P38747	307 aa	Known RBP	2.77	□□□□□ -1.97
UBC5	YDR059C	DLD2	P46681	530 aa	Known RBP	2.77	□□□□□ -1.97
UBC5	YDR059C	MRM2	P53123	320 aa		2.77	□□□□□ -1.97
UBC5	YDR059C	MST27	P53176	234 aa		2.77	□□□□□ -1.97
UBC5	YDR059C	SIL1	Q08199	421 aa		2.77	□□□□□ -1.97
UBC5	YDR059C	HSP42	Q12329	375 aa		2.77	□□□□□ -1.97
UBC5	YDR059C	ARG3	P05150	338 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	RHB1	P25378	209 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	GPI18	P38211	433 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	PTI1	P39927	425 aa	Predicted RBP	2.76	□□□□□ -1.97
UBC5	YDR059C	EGT2	P42835	1041 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	PFS2	P42841	465 aa	Known RBP	2.76	□□□□□ -1.97
UBC5	YDR059C	RPS0B	P46654	252 aa	Known RBP	2.76	□□□□□ -1.97
UBC5	YDR059C	FMS1	P50264	508 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	TPS1	Q00764	495 aa	Known RBP	2.76	□□□□□ -1.97
UBC5	YDR059C	GIP3	Q03016	1276 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	MDM36	Q06820	579 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	GRX6	Q12438	231 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	RAX2	Q12465	1220 aa		2.76	□□□□□ -1.97
UBC5	YDR059C	RPL3	P14126	387 aa	Known RBP	2.75	□□□□□ -1.97
UBC5	YDR059C	YCL068C	P25593	260 aa		2.75	□□□□□ -1.97
UBC5	YDR059C	IMP2'	P32351	346 aa		2.75	□□□□□ -1.97
UBC5	YDR059C	ANR2	P36090	516 aa	Predicted RBP	2.75	□□□□□ -1.97
UBC5	YDR059C	ATP22	P50273	684 aa	Predicted RBP	2.75	□□□□□ -1.97
UBC5	YDR059C	RKM1	Q08961	583 aa	Predicted RBP	2.75	□□□□□ -1.97
UBC5	YDR059C	GEX1	P25596	615 aa		2.74	□□□□□ -1.97
UBC5	YDR059C	SOR1	P35497	357 aa	Known RBP	2.74	□□□□□ -1.97
UBC5	YDR059C	UTP9	P38882	575 aa	Known RBP	2.74	□□□□□ -1.97
UBC5	YDR059C	SMF1	P38925	575 aa		2.74	□□□□□ -1.97
UBC5	YDR059C	ARF3	P40994	183 aa	RIP-Chip data	2.74	□□□□□ -1.97	not detected
UBC5	YDR059C	HST1	P53685	503 aa		2.74	□□□□□ -1.97
UBC5	YDR059C	TIM10	P87108	93 aa		2.74	□□□□□ -1.97
UBC5	YDR059C	SOR2	Q07786	357 aa		2.74	□□□□□ -1.97
UBC5	YDR059C	SCEI	P03882	235 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	BEM1	P29366	551 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	FMT1	P32785	401 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	YGL262W	P53054	175 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	YIP5	P53108	310 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	MNP1	P53163	194 aa	Predicted RBP	2.73	□□□□□ -1.97
UBC5	YDR059C	KTR6	P54070	446 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	CCE1	Q03702	353 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	PIN3	Q06449	215 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	SMC5	Q08204	1093 aa		2.73	□□□□□ -1.97
UBC5	YDR059C	SEC9	P40357	651 aa		2.72	□□□□□ -1.97
UBC5	YDR059C	HAC1	P41546	238 aa		2.72	□□□□□ -1.97
UBC5	YDR059C	RPA49	Q01080	415 aa	Predicted RBP	2.72	□□□□□ -1.97
UBC5	YDR059C	VAM3	Q12241	283 aa		2.72	□□□□□ -1.97
UBC5	YDR059C	FOL3	Q12676	427 aa	Predicted RBP	2.72	□□□□□ -1.97
UBC5	YDR059C	NAG1	Q8TGN9	163 aa		2.72	□□□□□ -1.97
UBC5	YDR059C	GFD2	P25370	566 aa	Known RBP	2.71	□□□□□ -1.98
UBC5	YDR059C	MRPL27	P36526	146 aa	Predicted RBP	2.71	□□□□□ -1.98
UBC5	YDR059C	MAM33	P40513	266 aa		2.71	□□□□□ -1.98
UBC5	YDR059C	PHO86	P46956	311 aa		2.71	□□□□□ -1.98
UBC5	YDR059C	AIM24	P47127	394 aa		2.71	□□□□□ -1.98
UBC5	YDR059C	CLD1	P53264	445 aa		2.71	□□□□□ -1.98
UBC5	YDR059C	YPL107W	Q02873	248 aa		2.71	□□□□□ -1.98
UBC5	YDR059C	YMR102C	Q03177	834 aa		2.71	□□□□□ -1.98
UBC5	YDR059C	BUD21	Q08492	214 aa	Predicted RBP	2.71	□□□□□ -1.98
UBC5	YDR059C	DPH5	P32469	300 aa	Predicted RBP	2.7	□□□□□ -1.98
UBC5	YDR059C	TFB1	P32776	642 aa		2.7	□□□□□ -1.98
UBC5	YDR059C	YHK8	P38776	514 aa		2.7	□□□□□ -1.98
UBC5	YDR059C	RRP4	P38792	359 aa	Known RBP	2.7	□□□□□ -1.98
UBC5	YDR059C	YFL012W	P43580	148 aa		2.7	□□□□□ -1.98
UBC5	YDR059C	LCB3	P47013	409 aa		2.7	□□□□□ -1.98
UBC5	YDR059C	SVL3	Q03088	825 aa	Known RBP	2.7	□□□□□ -1.98
UBC5	YDR059C	RRP45	Q05636	305 aa	Known RBP	2.7	□□□□□ -1.98
UBC5	YDR059C	MCH1	Q07376	486 aa		2.7	□□□□□ -1.98
UBC5	YDR059C	ATG34	Q12292	412 aa		2.7	□□□□□ -1.98
UBC5	YDR059C	ZRC1	P20107	442 aa		2.69	□□□□□ -1.98
UBC5	YDR059C	ZUO1	P32527	433 aa	Known RBP	2.69	□□□□□ -1.98
UBC5	YDR059C	SUB1	P54000	292 aa	Known RBP	2.69	□□□□□ -1.98
UBC5	YDR059C	SKI8	Q02793	397 aa	Predicted RBP	2.69	□□□□□ -1.98
UBC5	YDR059C	TDA1	Q03533	586 aa		2.69	□□□□□ -1.98
UBC5	YDR059C	MFG1	Q07684	458 aa		2.69	□□□□□ -1.98
UBC5	YDR059C	LOT6	Q07923	191 aa		2.69	□□□□□ -1.98
UBC5	YDR059C	EAF3	Q12432	401 aa		2.69	□□□□□ -1.98
UBC5	YDR059C	CLC1	P17891	233 aa		2.68	□□□□□ -1.98
UBC5	YDR059C	YBR056W	P38081	501 aa		2.68	□□□□□ -1.98
UBC5	YDR059C	COS5	P47187	383 aa		2.68	□□□□□ -1.98
UBC5	YDR059C	URH1	Q04179	340 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms