RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C SCS3P53012 380 aa4.38□□□□□ -1.71
CDC48YDL126C YGL185CP53100 379 aa4.38□□□□□ -1.71
CDC48YDL126C YGR127WP53275 312 aa4.38□□□□□ -1.71
CDC48YDL126C VAC7P53950 1165 aa4.38□□□□□ -1.71
CDC48YDL126C RCO1Q04779 684 aa4.38□□□□□ -1.71
CDC48YDL126C RTN1Q04947 295 aaKnown RBP4.38□□□□□ -1.71
CDC48YDL126C YPD1Q07688 167 aa4.38□□□□□ -1.71
CDC48YDL126C GEP3Q08622 556 aa4.38□□□□□ -1.71
CDC48YDL126C BAG7Q12128 409 aa4.38□□□□□ -1.71
CDC48YDL126C COX17Q12287 69 aa4.38□□□□□ -1.71
CDC48YDL126C AI5_BETAQ9ZZX0 354 aa4.38□□□□□ -1.71
CDC48YDL126C RIF1P29539 1916 aa4.38□□□□□ -1.71
CDC48YDL126C MRPL17P36528 281 aa4.38□□□□□ -1.71
CDC48YDL126C DUG2P38149 878 aa4.38□□□□□ -1.71
CDC48YDL126C RPH1P39956 796 aa4.38□□□□□ -1.71
CDC48YDL126C FMP33P46998 180 aa4.38□□□□□ -1.71
CDC48YDL126C TOM22P49334 152 aa4.38□□□□□ -1.71
CDC48YDL126C GCN5Q03330 439 aa4.38□□□□□ -1.71
CDC48YDL126C YDR222WQ04925 415 aa4.38□□□□□ -1.71
CDC48YDL126C RTT103Q05543 409 aa4.38□□□□□ -1.71
CDC48YDL126C DXO1Q06349 442 aa4.38□□□□□ -1.71
CDC48YDL126C NDJ1Q12366 352 aa4.38□□□□□ -1.71
CDC48YDL126C LAG2Q92325 660 aa4.38□□□□□ -1.71
CDC48YDL126C YLR462WO13556 202 aa4.37□□□□□ -1.71
CDC48YDL126C SPT3P06844 337 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-LR1P0C2J4 438 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-FP0CX61 438 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-GR2P0CX62 438 aa4.37□□□□□ -1.71
CDC48YDL126C ERG8P24521 451 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-CP25383 438 aa4.37□□□□□ -1.71
CDC48YDL126C FAA1P30624 700 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C TMT1P32643 299 aa4.37□□□□□ -1.71
CDC48YDL126C ANR2P36090 516 aaPredicted RBP4.37□□□□□ -1.71
CDC48YDL126C YHL049CP38722 271 aa4.37□□□□□ -1.71
CDC48YDL126C GOS1P38736 223 aa4.37□□□□□ -1.71
CDC48YDL126C YEL075CP39972 122 aa4.37□□□□□ -1.71
CDC48YDL126C LCP5P40079 357 aaPredicted RBP4.37□□□□□ -1.71
CDC48YDL126C YER189WP40104 122 aa4.37□□□□□ -1.71
CDC48YDL126C ELO3P40319 345 aa4.37□□□□□ -1.71
CDC48YDL126C YFL064CP43540 174 aa4.37□□□□□ -1.71
CDC48YDL126C COX16P47081 118 aa4.37□□□□□ -1.71
CDC48YDL126C ABM1P47146 123 aa4.37□□□□□ -1.71
CDC48YDL126C COG1P53079 417 aa4.37□□□□□ -1.71
CDC48YDL126C YGR035CP53222 116 aa4.37□□□□□ -1.71
CDC48YDL126C YTP1P53584 459 aa4.37□□□□□ -1.71
CDC48YDL126C REC102Q02721 264 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-DR2Q03483 438 aa4.37□□□□□ -1.71
CDC48YDL126C YDR179W-AQ03983 463 aa4.37□□□□□ -1.71
CDC48YDL126C HBT1Q07653 1046 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C AKR2Q12013 749 aa4.37□□□□□ -1.71
CDC48YDL126C AIM41Q12032 185 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-BQ12260 438 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-OR2Q12293 438 aa4.37□□□□□ -1.71
CDC48YDL126C NCA2Q12374 616 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-DR1Q12392 438 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-OR1Q12439 438 aa4.37□□□□□ -1.71
CDC48YDL126C AFI1Q99222 893 aa4.37□□□□□ -1.71
CDC48YDL126C TY2A-DR3Q99303 438 aa4.37□□□□□ -1.71
CDC48YDL126C SEC53P07283 254 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C WHI2P12611 486 aa4.37□□□□□ -1.71
CDC48YDL126C SSE2P32590 693 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C TRM2P33753 639 aa4.37□□□□□ -1.71
CDC48YDL126C SWC5P38326 303 aa4.37□□□□□ -1.71
CDC48YDL126C TRM5P38793 499 aa4.37□□□□□ -1.71
CDC48YDL126C SWP82P43554 623 aa4.37□□□□□ -1.71
CDC48YDL126C DLD2P46681 530 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C PHO86P46956 311 aa4.37□□□□□ -1.71
CDC48YDL126C TAH11P47112 604 aa4.37□□□□□ -1.71
CDC48YDL126C AAD10P47182 288 aa4.37□□□□□ -1.71
CDC48YDL126C STB4P50104 949 aa4.37□□□□□ -1.71
CDC48YDL126C PAN2P53010 1115 aaPredicted RBP4.37□□□□□ -1.71
CDC48YDL126C LCL3P53153 274 aa4.37□□□□□ -1.71
CDC48YDL126C DRN1P53255 507 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C RHO5P53879 331 aaKnown RBP4.37□□□□□ -1.71
CDC48YDL126C TRS31Q03337 283 aa4.37□□□□□ -1.71
CDC48YDL126C RSN1Q03516 953 aa4.37□□□□□ -1.71
CDC48YDL126C THI72Q08579 599 aa4.37□□□□□ -1.71
CDC48YDL126C YPR063CQ12160 140 aa4.37□□□□□ -1.71
CDC48YDL126C YOR214CQ12282 236 aa4.37□□□□□ -1.71
CDC48YDL126C YDR061WQ12298 539 aa4.37□□□□□ -1.71
CDC48YDL126C MRPL23Q12487 163 aaPredicted RBP4.37□□□□□ -1.71
CDC48YDL126C ECM3Q99252 613 aa4.37□□□□□ -1.71
CDC48YDL126C LAA1P39526 2014 aa4.37□□□□□ -1.71
CDC48YDL126C ASP3-2P0CX77 362 aa4.36□□□□□ -1.71
CDC48YDL126C ASP3-3P0CX78 362 aa4.36□□□□□ -1.71
CDC48YDL126C ASP3-4P0CX79 362 aa4.36□□□□□ -1.71
CDC48YDL126C ASP3-1P0CZ17 362 aa4.36□□□□□ -1.71
CDC48YDL126C CDC24P11433 854 aaPredicted RBP4.36□□□□□ -1.71
CDC48YDL126C RRT12P25381 491 aa4.36□□□□□ -1.71
CDC48YDL126C MEI5P32489 222 aa4.36□□□□□ -1.71
CDC48YDL126C MRPL37P36532 105 aa4.36□□□□□ -1.71
CDC48YDL126C KAP104P38217 918 aaKnown RBP4.36□□□□□ -1.71
CDC48YDL126C YBR259WP38338 688 aa4.36□□□□□ -1.71
CDC48YDL126C MMS21P38632 267 aa4.36□□□□□ -1.71
CDC48YDL126C GIM4P40005 111 aaKnown RBP4.36□□□□□ -1.71
CDC48YDL126C BNA3P47039 444 aaKnown RBP4.36□□□□□ -1.71
CDC48YDL126C GLO1P50107 326 aa4.36□□□□□ -1.71
CDC48YDL126C COS12P53053 380 aa4.36□□□□□ -1.71
CDC48YDL126C PNC1P53184 216 aaKnown RBP4.36□□□□□ -1.71
CDC48YDL126C LUC7Q07508 261 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms