RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C ROG1P53118 685 aa2.81□□□□□ -1.96
SRD1YCR018C IBD2P53892 351 aa2.81□□□□□ -1.96
SRD1YCR018C YDR541CQ03049 344 aa2.81□□□□□ -1.96
SRD1YCR018C MMT1Q03218 510 aa2.81□□□□□ -1.96
SRD1YCR018C YDR341CQ05506 607 aaKnown RBP2.81□□□□□ -1.96
SRD1YCR018C RMD5Q12508 421 aa2.81□□□□□ -1.96
SRD1YCR018C PRP16P15938 1071 aaPredicted RBP2.8□□□□□ -1.96
SRD1YCR018C SPO12P17123 173 aa2.8□□□□□ -1.96
SRD1YCR018C MSP1P28737 362 aa2.8□□□□□ -1.96
SRD1YCR018C NRP1P32770 719 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SRD1YCR018C DAD2P36162 133 aa2.8□□□□□ -1.96
SRD1YCR018C KAP104P38217 918 aaKnown RBP2.8□□□□□ -1.96
SRD1YCR018C INM1P38710 295 aa2.8□□□□□ -1.96
SRD1YCR018C WWM1P43582 211 aaKnown RBP2.8□□□□□ -1.96
SRD1YCR018C MLC1P53141 149 aa2.8□□□□□ -1.96
SRD1YCR018C MSO1P53604 210 aaKnown RBP2.8□□□□□ -1.96
SRD1YCR018C STD1Q02794 444 aa2.8□□□□□ -1.96
SRD1YCR018C YPL107WQ02873 248 aa2.8□□□□□ -1.96
SRD1YCR018C YMR181CQ03231 154 aa2.8□□□□□ -1.96
SRD1YCR018C URH1Q04179 340 aa2.8□□□□□ -1.96
SRD1YCR018C SMA2Q04658 369 aa2.8□□□□□ -1.96
SRD1YCR018C NSE1Q07913 336 aa2.8□□□□□ -1.96
SRD1YCR018C SNX3Q08826 162 aaKnown RBP2.8□□□□□ -1.96
SRD1YCR018C THP3Q12049 470 aaKnown RBP2.8□□□□□ -1.96
SRD1YCR018C SMF3Q12078 473 aaPredicted RBP2.8□□□□□ -1.96
SRD1YCR018C YLR108CQ12259 485 aa2.8□□□□□ -1.96
SRD1YCR018C RRP12Q12754 1228 aaKnown RBP2.8□□□□□ -1.96
SRD1YCR018C RAD61Q99359 647 aa2.8□□□□□ -1.96
SRD1YCR018C CHS1P08004 1131 aa2.79□□□□□ -1.96
SRD1YCR018C NFT1P0CE68 1218 aa2.79□□□□□ -1.96
SRD1YCR018C IMA3P0CW40 589 aa2.79□□□□□ -1.96
SRD1YCR018C IMA4P0CW41 589 aa2.79□□□□□ -1.96
SRD1YCR018C HEM15P16622 393 aa2.79□□□□□ -1.96
SRD1YCR018C SLM5P25345 492 aaKnown RBP2.79□□□□□ -1.96
SRD1YCR018C LOS1P33418 1100 aaPredicted RBP2.79□□□□□ -1.96
SRD1YCR018C LAS1P36146 502 aaPredicted RBP2.79□□□□□ -1.96
SRD1YCR018C MTC6P38849 526 aa2.79□□□□□ -1.96
SRD1YCR018C GPI16P38875 610 aa2.79□□□□□ -1.96
SRD1YCR018C MNL1P38888 796 aa2.79□□□□□ -1.96
SRD1YCR018C CAJ1P39101 391 aa2.79□□□□□ -1.96
SRD1YCR018C FAA2P39518 744 aa2.79□□□□□ -1.96
SRD1YCR018C MMF1P40185 145 aaKnown RBP2.79□□□□□ -1.96
SRD1YCR018C YPS6P40583 537 aa2.79□□□□□ -1.96
SRD1YCR018C IDP2P41939 412 aa2.79□□□□□ -1.96
SRD1YCR018C AZR1P50080 613 aa2.79□□□□□ -1.96
SRD1YCR018C ATP22P50273 684 aaPredicted RBP2.79□□□□□ -1.96
SRD1YCR018C YIP5P53108 310 aa2.79□□□□□ -1.96
SRD1YCR018C MEH1Q02205 184 aa2.79□□□□□ -1.96
SRD1YCR018C RRP9Q06506 573 aaKnown RBP2.79□□□□□ -1.96
SRD1YCR018C NDL1Q06568 189 aa2.79□□□□□ -1.96
SRD1YCR018C IMA2Q08295 589 aa2.79□□□□□ -1.96
SRD1YCR018C NFI1Q12216 726 aa2.79□□□□□ -1.96
SRD1YCR018C SKS1Q12505 502 aa2.79□□□□□ -1.96
SRD1YCR018C PHO84P25297 587 aaKnown RBP2.78□□□□□ -1.96
SRD1YCR018C ITR1P30605 584 aa2.78□□□□□ -1.96
SRD1YCR018C NIP1P32497 812 aaKnown RBP2.78□□□□□ -1.96
SRD1YCR018C COX13P32799 129 aa2.78□□□□□ -1.96
SRD1YCR018C MRPL4P36517 319 aa2.78□□□□□ -1.96
SRD1YCR018C MIX23P38162 196 aa2.78□□□□□ -1.96
SRD1YCR018C QDR3P38227 689 aa2.78□□□□□ -1.96
SRD1YCR018C PAC11P40960 533 aa2.78□□□□□ -1.96
SRD1YCR018C NCA3P46955 337 aa2.78□□□□□ -1.96
SRD1YCR018C ASN2P49090 572 aaKnown RBP2.78□□□□□ -1.96
SRD1YCR018C HNT3Q08702 217 aa2.78□□□□□ -1.96
SRD1YCR018C SRL2Q12020 392 aa2.78□□□□□ -1.96
SRD1YCR018C TFB5Q3E7C1 72 aaPredicted RBP2.78□□□□□ -1.96
SRD1YCR018C YBR298C-AQ8TGK4 73 aa2.78□□□□□ -1.96
SRD1YCR018C RNA14P25298 677 aaKnown RBP2.77□□□□□ -1.97
SRD1YCR018C MUD1P32605 298 aaKnown RBP2.77□□□□□ -1.97
SRD1YCR018C YSC83P32792 385 aa2.77□□□□□ -1.97
SRD1YCR018C SKN1P33336 771 aa2.77□□□□□ -1.97
SRD1YCR018C YBL028CP38202 106 aa2.77□□□□□ -1.97
SRD1YCR018C MLH1P38920 769 aa2.77□□□□□ -1.97
SRD1YCR018C SFH5P47008 294 aa2.77□□□□□ -1.97
SRD1YCR018C YGR016WP53209 190 aa2.77□□□□□ -1.97
SRD1YCR018C RRN11Q04712 507 aa2.77□□□□□ -1.97
SRD1YCR018C SNT309Q06091 175 aaPredicted RBP2.77□□□□□ -1.97
SRD1YCR018C NDE2Q07500 545 aa2.77□□□□□ -1.97
SRD1YCR018C YFH1Q07540 174 aa2.77□□□□□ -1.97
SRD1YCR018C ESA1Q08649 445 aa2.77□□□□□ -1.97
SRD1YCR018C TPT1Q12272 230 aaKnown RBP2.77□□□□□ -1.97
SRD1YCR018C CEX1Q12453 761 aa2.77□□□□□ -1.97
SRD1YCR018C SRN2Q99176 213 aa2.77□□□□□ -1.97
SRD1YCR018C ATP1P07251 545 aaKnown RBP2.76□□□□□ -1.97
SRD1YCR018C SDH3P33421 198 aa2.76□□□□□ -1.97
SRD1YCR018C DOA1P36037 715 aa2.76□□□□□ -1.97
SRD1YCR018C YSW1P38280 609 aa2.76□□□□□ -1.97
SRD1YCR018C ATM1P40416 690 aa2.76□□□□□ -1.97
SRD1YCR018C BTN2P53286 410 aa2.76□□□□□ -1.97
SRD1YCR018C CCE1Q03702 353 aa2.76□□□□□ -1.97
SRD1YCR018C BCH1Q05029 724 aa2.76□□□□□ -1.97
SRD1YCR018C CUE5Q08412 411 aaKnown RBP2.76□□□□□ -1.97
SRD1YCR018C NCA2Q12374 616 aa2.76□□□□□ -1.97
SRD1YCR018C YMR230W-AQ3E7B5 62 aa2.76□□□□□ -1.97
SRD1YCR018C YCL021W-AQ96VH3 125 aa2.76□□□□□ -1.97
SRD1YCR018C ARF1P11076 181 aaKnown RBP2.75□□□□□ -1.97
SRD1YCR018C CPR4P25334 318 aa2.75□□□□□ -1.97
SRD1YCR018C YCL068CP25593 260 aa2.75□□□□□ -1.97
SRD1YCR018C SMI1P32566 505 aa2.75□□□□□ -1.97
SRD1YCR018C CHK1P38147 527 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms