RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 LMBR1Q8WVP7 490 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 RNF26Q9BY78 433 aaPredicted RBP14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 NKX2-4Q9H2Z4 354 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 AGO4Q9HCK5 861 aaKnown RBP14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 KCNH7Q9NS40 1196 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 GJB4Q9NTQ9 266 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 PDRG1Q9NUG6 133 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 TPCN1Q9ULQ1 816 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 CHD9Q3L8U1 2897 aa14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 COL4A4P53420 1690 aaPredicted RBP14.48□□□□□ -0.09
CHRNA3-208ENST00000561128 ZBBXA8MT70 800 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 SELPP16109 830 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 DEFB103AP81534 67 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 SCRN1Q12765 414 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 PTK7Q13308 1070 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 AP3B2Q13367 1082 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 AFAP1L1Q8TED9 768 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 TIFAQ96CG3 184 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 STXBP5LQ9Y2K9 1186 aa14.47□□□□□ -0.09
CHRNA3-208ENST00000561128 COL6A3P12111 3177 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 C17orf102A2RUQ5 167 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 DDX39AO00148 427 aaKnown RBP14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 MEIS1O00470 390 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 CTDNEP1O95476 244 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 CTSHP09668 335 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 AK2P54819 239 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 BFSP2Q13515 415 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 CEP55Q53EZ4 464 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 REXO1Q8N1G1 1221 aaKnown RBP14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 CAGE1Q8TC20 777 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 ATP6V0A1Q93050 837 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 LENG9Q96B70 501 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 IL17RAQ96F46 866 aa14.46□□□□□ -0.09
CHRNA3-208ENST00000561128 CDH23Q9H251 3354 aa14.46□□□□□ -0.1
CHRNA3-208ENST00000561128 EMSYQ7Z589 1322 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 DHX15O43143 795 aaKnown RBP14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 LGR5O75473 907 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 CXCL10P02778 98 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 ACTR2P61160 394 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 MARCH8Q5T0T0 291 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 TRAPPC12Q8WVT3 735 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 GJA10Q969M2 543 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 ZNF274Q96GC6 653 aaPredicted RBP14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 ZNF576Q9H609 170 aa14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 JPH1Q9HDC5 661 aaPredicted RBP14.45□□□□□ -0.1
CHRNA3-208ENST00000561128 M0R2N6 131 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 FOSP01100 380 aaPredicted RBP14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 PFKMP08237 780 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 CYP3A4P08684 503 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 ATP2A2P16615 1042 aaKnown RBP14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 RFC2P35250 354 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 THPOP40225 353 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 WDR5P61964 334 aaKnown RBP14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 C8orf34Q49A92 452 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 PLA2G4DQ86XP0 818 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 RPUSD2Q8IZ73 545 aaKnown RBP14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 NECAB1Q8N987 351 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 USP38Q8NB14 1042 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 SEPT1Q8WYJ6 367 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 FTOQ9C0B1 505 aaKnown RBP eCLIP14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 EHMT1Q9H9B1 1298 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 SLC9A2Q9UBY0 812 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 KCNJ14Q9UNX9 436 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 SLC4A7Q9Y6M7 1214 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 MICAL3Q7RTP6 2002 aa14.44□□□□□ -0.1
CHRNA3-208ENST00000561128 NFASCO94856 1347 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 COL4A6Q14031 1691 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 LCHNA4D1U4 455 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 EPOPA6NHQ4 379 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 ADGRE1Q14246 886 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 GRIK4Q16099 956 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 CCDC60Q8IWA6 550 aaPredicted RBP14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 CCDC155Q8N6L0 562 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 CDHR1Q96JP9 859 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 PRDM12Q9H4Q4 367 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 C6orf50Q9HD87 102 aa14.43□□□□□ -0.1
CHRNA3-208ENST00000561128 EYSQ5T1H1 3165 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 TMEM265A0A087WTH1 108 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 FAM205CA6NFA0 338 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 PFKFB2O60825 505 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 TDP2O95551 362 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 CA3P07451 260 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 IGBP1P78318 339 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 SSRP1Q08945 709 aaKnown RBP14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 MGAT3Q09327 533 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 PPFIA1Q13136 1202 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 PLCB4Q15147 1175 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 ME3Q16798 604 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 NIPA1Q7RTP0 329 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 ZNF215Q9UL58 517 aaPredicted RBP14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 CHD7Q9P2D1 2997 aa14.42□□□□□ -0.1
CHRNA3-208ENST00000561128 WDR81Q562E7 1941 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 IGKV6D-21A0A0A0MT36 114 aa14.41□□□□□ -0.1
CHRNA3-208ENST00000561128 MBLAC1A4D2B0 266 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms