RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 NFKBIBQ15653 356 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 PIK3R6Q5UE93 754 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 E4F1Q66K89 784 aaPredicted RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 CRTC3Q6UUV7 619 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 DDX53Q86TM3 631 aaKnown RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 MTDHQ86UE4 582 aaKnown RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 IFNL3Q8IZI9 196 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 ZNF655Q8N720 491 aaPredicted RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 PHF20Q9BVI0 1012 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 BTG4Q9NY30 223 aa7.36□□□□□ -1.23
PRDM4-206ENST00000550659 RGS17Q9UGC6 210 aaPredicted RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 APOBEC2Q9Y235 224 aaKnown RBP7.36□□□□□ -1.23
PRDM4-206ENST00000550659 RTL1A6NKG5 1358 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 CCDC194A0A1B0GVG4 234 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 SHISA3A0PJX4 238 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 C2orf71A6NGG8 1288 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 ARVCFO00192 962 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 MEIS1O00470 390 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 MEFVO15553 781 aaPredicted RBP7.35□□□□□ -1.23
PRDM4-206ENST00000550659 CLEC16AQ2KHT3 1053 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 PI4K2BQ8TCG2 481 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 MEGF10Q96KG7 1140 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 GPR62Q9BZJ7 368 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 SAMD15Q9P1V8 674 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 ABCC6O95255 1503 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 NWD2Q9ULI1 1742 aa7.35□□□□□ -1.23
PRDM4-206ENST00000550659 AFF2P51816 1311 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 TSPAN6O43657 245 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 SRFP11831 508 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 LTBRP36941 435 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 NEK2P51955 445 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 TBX4P57082 545 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 TNK2Q07912 1038 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 ITKQ08881 620 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 KCNAB2Q13303 367 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 ABHD17CQ6PCB6 329 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 OGFOD3Q6PK18 319 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 BEND4Q6ZU67 534 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 TXNRD3Q86VQ6 643 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 MFSD4AQ8N468 514 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 PNISRQ8TF01 805 aaKnown RBP7.34□□□□□ -1.23
PRDM4-206ENST00000550659 GATA6Q92908 595 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 HEXIM2Q96MH2 286 aaKnown RBP7.34□□□□□ -1.23
PRDM4-206ENST00000550659 FCRL3Q96P31 734 aaPredicted RBP7.34□□□□□ -1.23
PRDM4-206ENST00000550659 KCNF1Q9H3M0 494 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 GPRC5CQ9NQ84 441 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 PCDHA8Q9Y5H6 950 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 CAPN6Q9Y6Q1 641 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 BLMP54132 1417 aaPredicted RBP7.34□□□□□ -1.23
PRDM4-206ENST00000550659 NCAPD2Q15021 1401 aa7.34□□□□□ -1.23
PRDM4-206ENST00000550659 GLI3P10071 1580 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 CNTNAP5Q8WYK1 1306 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.33□□□□□ -1.24
PRDM4-206ENST00000550659 RBAK-RBAKDNI3L0D1 243 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 CBX4O00257 560 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 NEMP1O14524 444 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 DHX15O43143 795 aaKnown RBP7.33□□□□□ -1.24
PRDM4-206ENST00000550659 IFNGR1P15260 489 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 COL8A1P27658 744 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 SEPHS1P49903 392 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 PPP2R5AQ15172 486 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 EEF1DP3Q658K8 133 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 IQCEQ6IPM2 695 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 TREML4Q6UXN2 200 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 CLEC10AQ8IUN9 316 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 KSR1Q8IVT5 923 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 MTMR8Q96EF0 704 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 FAM83CQ9BQN1 747 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 SLC12A9Q9BXP2 914 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
PRDM4-206ENST00000550659 MEGF6O75095 1541 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 WDR17Q8IZU2 1322 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 IGSF1Q8N6C5 1336 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 WNK3Q9BYP7 1800 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 ARNTLO00327 626 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 PRC1O43663 620 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 GLRX3O76003 335 aaKnown RBP7.32□□□□□ -1.24
PRDM4-206ENST00000550659 F2P00734 622 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 HMOX1P09601 288 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 PLS3P13797 630 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 VAV1P15498 845 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 TMPRSS15P98073 1019 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 DSG1Q02413 1049 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 LBX2Q6XYB7 198 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 ALYREFQ86V81 257 aaKnown RBP7.32□□□□□ -1.24
PRDM4-206ENST00000550659 CCDC103Q8IW40 242 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 ZC3H7AQ8IWR0 971 aaKnown RBP7.32□□□□□ -1.24
PRDM4-206ENST00000550659 DIO2Q92813 273 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
PRDM4-206ENST00000550659 ALG1Q9BT22 464 aa7.32□□□□□ -1.24
PRDM4-206ENST00000550659 CELF4Q9BZC1 486 aaKnown RBP7.32□□□□□ -1.24
PRDM4-206ENST00000550659 TMEFF2Q9UIK5 374 aaPredicted RBP7.32□□□□□ -1.24
PRDM4-206ENST00000550659 ADAMTS8Q9UP79 889 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms