RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
PRDM4-206ENST00000550659 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
PRDM4-206ENST00000550659 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
PRDM4-206ENST00000550659 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
PRDM4-206ENST00000550659 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
PRDM4-206ENST00000550659 ADRA2BP18089 450 aa16.46■□□□□ 0.23
PRDM4-206ENST00000550659 FOXD1Q16676 465 aa16.44■□□□□ 0.22
PRDM4-206ENST00000550659 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
PRDM4-206ENST00000550659 KCNA4P22459 653 aa16.05■□□□□ 0.16
PRDM4-206ENST00000550659 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
PRDM4-206ENST00000550659 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
PRDM4-206ENST00000550659 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
PRDM4-206ENST00000550659 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
PRDM4-206ENST00000550659 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
PRDM4-206ENST00000550659 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
PRDM4-206ENST00000550659 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
PRDM4-206ENST00000550659 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
PRDM4-206ENST00000550659 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
PRDM4-206ENST00000550659 MSH5O43196 834 aa14.92□□□□□ -0.02
PRDM4-206ENST00000550659 ZBTB22O15209 634 aa14.78□□□□□ -0.04
PRDM4-206ENST00000550659 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
PRDM4-206ENST00000550659 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
PRDM4-206ENST00000550659 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
PRDM4-206ENST00000550659 RNF216Q9NWF9 866 aaPredicted RBP14.59□□□□□ -0.07
PRDM4-206ENST00000550659 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
PRDM4-206ENST00000550659 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
PRDM4-206ENST00000550659 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
PRDM4-206ENST00000550659 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
PRDM4-206ENST00000550659 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
PRDM4-206ENST00000550659 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
PRDM4-206ENST00000550659 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
PRDM4-206ENST00000550659 FKBP8Q14318 412 aa13.75□□□□□ -0.21
PRDM4-206ENST00000550659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRDM4-206ENST00000550659 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
PRDM4-206ENST00000550659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
PRDM4-206ENST00000550659 HNRNPUL2Q1KMD3 747 aaKnown RBP13.6□□□□□ -0.23
PRDM4-206ENST00000550659 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
PRDM4-206ENST00000550659 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
PRDM4-206ENST00000550659 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
PRDM4-206ENST00000550659 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
PRDM4-206ENST00000550659 APLP2Q06481 763 aa13.3□□□□□ -0.28
PRDM4-206ENST00000550659 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
PRDM4-206ENST00000550659 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
PRDM4-206ENST00000550659 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
PRDM4-206ENST00000550659 MKRN4PQ13434 485 aaPredicted RBP13.04□□□□□ -0.32
PRDM4-206ENST00000550659 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
PRDM4-206ENST00000550659 PROM2Q8N271 834 aa13.02□□□□□ -0.33
PRDM4-206ENST00000550659 FBLN2P98095 1184 aa12.98□□□□□ -0.33
PRDM4-206ENST00000550659 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
PRDM4-206ENST00000550659 VASPP50552 380 aaPredicted RBP12.9□□□□□ -0.34
PRDM4-206ENST00000550659 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
PRDM4-206ENST00000550659 POLA2Q14181 598 aa12.87□□□□□ -0.35
PRDM4-206ENST00000550659 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
PRDM4-206ENST00000550659 CAPN15O75808 1086 aa12.8□□□□□ -0.36
PRDM4-206ENST00000550659 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-206ENST00000550659 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-206ENST00000550659 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
PRDM4-206ENST00000550659 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
PRDM4-206ENST00000550659 ABCB7O75027 752 aa12.61□□□□□ -0.39
PRDM4-206ENST00000550659 PKD2Q13563 968 aa12.61□□□□□ -0.39
PRDM4-206ENST00000550659 DCAF8L2P0C7V8 631 aa12.57□□□□□ -0.4
PRDM4-206ENST00000550659 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
PRDM4-206ENST00000550659 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
PRDM4-206ENST00000550659 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
PRDM4-206ENST00000550659 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
PRDM4-206ENST00000550659 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
PRDM4-206ENST00000550659 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
PRDM4-206ENST00000550659 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
PRDM4-206ENST00000550659 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
PRDM4-206ENST00000550659 DSG3P32926 999 aa12.46□□□□□ -0.41
PRDM4-206ENST00000550659 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
PRDM4-206ENST00000550659 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
PRDM4-206ENST00000550659 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.42
PRDM4-206ENST00000550659 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
PRDM4-206ENST00000550659 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
PRDM4-206ENST00000550659 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
PRDM4-206ENST00000550659 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRDM4-206ENST00000550659 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
PRDM4-206ENST00000550659 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
PRDM4-206ENST00000550659 BCANQ96GW7 911 aa12.31□□□□□ -0.44
PRDM4-206ENST00000550659 MIER1Q8N108 512 aa12.3□□□□□ -0.44
PRDM4-206ENST00000550659 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
PRDM4-206ENST00000550659 RGL2O15211 777 aa12.25□□□□□ -0.45
PRDM4-206ENST00000550659 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
PRDM4-206ENST00000550659 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
PRDM4-206ENST00000550659 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
PRDM4-206ENST00000550659 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
PRDM4-206ENST00000550659 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
PRDM4-206ENST00000550659 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
PRDM4-206ENST00000550659 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
PRDM4-206ENST00000550659 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
PRDM4-206ENST00000550659 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
PRDM4-206ENST00000550659 CHGAP10645 457 aaKnown RBP12.09□□□□□ -0.47
PRDM4-206ENST00000550659 PRKCSHP14314 528 aaPredicted RBP12.03□□□□□ -0.48
PRDM4-206ENST00000550659 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
PRDM4-206ENST00000550659 GSE1Q14687 1217 aa12.02□□□□□ -0.49
PRDM4-206ENST00000550659 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
PRDM4-206ENST00000550659 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
PRDM4-206ENST00000550659 CACNB1Q02641 598 aaPredicted RBP11.97□□□□□ -0.49
PRDM4-206ENST00000550659 NUBP1P53384 320 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms