RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 INPP4AQ96PE3 977 aaPredicted RBP11.31□□□□□ -0.6
CCL28-203ENST00000513525 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
CCL28-203ENST00000513525 MSRAQ9UJ68 235 aa11.31□□□□□ -0.6
CCL28-203ENST00000513525 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
CCL28-203ENST00000513525 SNX14Q9Y5W7 946 aa11.31□□□□□ -0.6
CCL28-203ENST00000513525 COL4A4P53420 1690 aaPredicted RBP11.31□□□□□ -0.6
CCL28-203ENST00000513525 MEIS2O14770 477 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 MCM4P33991 863 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 NUCB2P80303 420 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 SP2Q02086 613 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 CUL4AQ13619 759 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 MFSD10Q14728 455 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 HSDL1Q3SXM5 330 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCL28-203ENST00000513525 CUL5Q93034 780 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 INTS4Q96HW7 963 aaKnown RBP11.3□□□□□ -0.6
CCL28-203ENST00000513525 SPATA33Q96N06 139 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 REV3LO60673 3130 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 DLL1O00548 723 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
CCL28-203ENST00000513525 ZNF286BP0CG31 522 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 ACTN1P12814 892 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 XRRA1Q6P2D8 792 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 CLEC17AQ6ZS10 378 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 DEFB128Q7Z7B8 93 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 C7orf31Q8N865 590 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 GPKOWQ92917 476 aaPredicted RBP eCLIP11.3□□□□□ -0.6
CCL28-203ENST00000513525 GBP4Q96PP9 640 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
CCL28-203ENST00000513525 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 SPATA31C2B4DYI2 1134 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 FIBPO43427 364 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 BAIAP3O94812 1187 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 SELPP16109 830 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 RXRAP19793 462 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 PTK7Q13308 1070 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 NEDD9Q14511 834 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 USP17L6PQ6QN14 398 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 METTL7BQ6UX53 244 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 PHOSPHO2Q8TCD6 241 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
CCL28-203ENST00000513525 TMX3Q96JJ7 454 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 SLC9A7Q96T83 725 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 SENP7Q9BQF6 1050 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 LRRC2Q9BYS8 371 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 SLC28A3Q9HAS3 691 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 YBX2Q9Y2T7 364 aaKnown RBP11.29□□□□□ -0.6
CCL28-203ENST00000513525 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
CCL28-203ENST00000513525 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 CXCL10P02778 98 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 CKBP12277 381 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 HOXC8P31273 242 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 FOSBP53539 338 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 KRT32Q14532 448 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 LRRC8DQ7L1W4 858 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 MICU3Q86XE3 530 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 TEX2Q8IWB9 1127 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 CMTR1Q8N1G2 835 aaKnown RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 TNPO1Q92973 898 aaKnown RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 NKX2-4Q9H2Z4 354 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 SPTBN5Q9NRC6 3674 aaKnown RBP11.28□□□□□ -0.6
CCL28-203ENST00000513525 EVPLQ92817 2033 aa11.28□□□□□ -0.6
CCL28-203ENST00000513525 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.6
CCL28-203ENST00000513525 H3BRB1 525 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 LGALS2P05162 132 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 PSMA5P28066 241 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 DEKP35659 375 aaKnown RBP11.27□□□□□ -0.61
CCL28-203ENST00000513525 RCAN1P53805 252 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 GPNMBQ14956 572 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 TRIM71Q2Q1W2 868 aaKnown RBP11.27□□□□□ -0.61
CCL28-203ENST00000513525 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
CCL28-203ENST00000513525 GIMAP8Q8ND71 665 aaPredicted RBP11.27□□□□□ -0.61
CCL28-203ENST00000513525 GPRASP2Q96D09 838 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 FTOQ9C0B1 505 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCL28-203ENST00000513525 PRDM12Q9H4Q4 367 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 TUT1Q9H6E5 874 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms