RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 GPRASP2Q96D09 838 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 PDCD2LQ9BRP1 358 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 AP5M1Q9H0R1 490 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 VPS54Q9P1Q0 977 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 TCEAL9Q9UHQ7 104 aa6.92□□□□□ -1.3
HMGCL-206ENST00000496907 NOL7Q9UMY1 257 aaKnown RBP6.92□□□□□ -1.3
HMGCL-206ENST00000496907 REV3LO60673 3130 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 hCG_1642624A0A1W2PR95 340 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 OPLAHO14841 1288 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 CABYRO75952 493 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 BAG4O95429 457 aaKnown RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 LARGE1O95461 756 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 SNAI1O95863 264 aaPredicted RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 RARBP10826 455 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 GJB2P29033 226 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 HOXA13P31271 388 aaPredicted RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 CIITAP33076 1130 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 CYP2C19P33261 490 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 KCNQ1P51787 676 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 NKX3-2P78367 333 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 CNTN2Q02246 1040 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 TNFAIP2Q03169 654 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 LAMC2Q13753 1193 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 KRT40Q6A162 431 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 PPP4R3AQ6IN85 833 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 USP17L6PQ6QN14 398 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 SLC30A10Q6XR72 485 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 RNF180Q86T96 592 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 PCSK9Q8NBP7 692 aaKnown RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 TBC1D5Q92609 795 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 BADQ92934 168 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 DDX27Q96GQ7 796 aaKnown RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 TSEN34Q9BSV6 310 aaKnown RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 ANO3Q9BYT9 981 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 ZSCAN16Q9H4T2 348 aaPredicted RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 JADE2Q9NQC1 790 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 TBC1D22BQ9NU19 505 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 DDX20Q9UHI6 824 aaKnown RBP6.91□□□□□ -1.3
HMGCL-206ENST00000496907 XIRP2A4UGR9 3374 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 FRMPD4Q14CM0 1322 aa6.91□□□□□ -1.3
HMGCL-206ENST00000496907 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 TBX3O15119 743 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 JAK2O60674 1132 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 PPFIA4O75335 1185 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 BMP15O95972 392 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 GH1P01241 217 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 ZNF865P0CJ78 1059 aaPredicted RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 TXNP10599 105 aaKnown RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 MYCLP12524 364 aaPredicted RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 BMP1P13497 986 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 CYBAP13498 195 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 EIF2AK2P19525 551 aaKnown RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 CYP3A7P24462 503 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 U2AF2P26368 475 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 CPT1AP50416 773 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 ARHGAP4P98171 946 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 COL9A2Q14055 689 aaPredicted RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 CCDC144BQ3MJ40 725 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 DUSP28Q4G0W2 176 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 CEP55Q53EZ4 464 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 JAKMIP3Q5VZ66 844 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 BRAPQ7Z569 592 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 NEK8Q86SG6 692 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 PLPP6Q8IY26 295 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 DIS3L2Q8IYB7 885 aaKnown RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 FAM20AQ96MK3 541 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 INPP4AQ96PE3 977 aaPredicted RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 MXRA8Q9BRK3 442 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 SDF4Q9BRK5 362 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 WDR11Q9BZH6 1224 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 ZHX1Q9UKY1 873 aaPredicted RBP6.9□□□□□ -1.3
HMGCL-206ENST00000496907 ATP6V1DQ9Y5K8 247 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 UBIAD1Q9Y5Z9 338 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 MRVI1Q9Y6F6 885 aa6.9□□□□□ -1.3
HMGCL-206ENST00000496907 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 TRANK1O15050 2925 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 MOXD2PA6NHM9 499 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 KBTBD13C9JR72 458 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 M0R2N6 131 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 DNM1LO00429 736 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 MEIS1O00470 390 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 LAD1O00515 517 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 MARCH6O60337 910 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 DKC1O60832 514 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGCL-206ENST00000496907 CD2BP2O95400 341 aaKnown RBP6.89□□□□□ -1.31
HMGCL-206ENST00000496907 GJA9P57773 515 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 MTMR1Q13613 665 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 UBE2SQ16763 222 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 TRIM60Q495X7 471 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 Q4G0T1 1027 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 GJC2Q5T442 439 aaPredicted RBP6.89□□□□□ -1.31
HMGCL-206ENST00000496907 ATL3Q6DD88 541 aa6.89□□□□□ -1.31
HMGCL-206ENST00000496907 TYW1BQ6NUM6 668 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms