RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TRAF7Q6Q0C0 670 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 CYFIP1Q7L576 1253 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 TRIM50Q86XT4 487 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 RPUSD2Q8IZ73 545 aaKnown RBP17.78■□□□□ 0.44
SDF4-204ENST00000459994 PGBD1Q96JS3 809 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 MLXIPQ9HAP2 919 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 NOD1Q9Y239 953 aa17.78■□□□□ 0.44
SDF4-204ENST00000459994 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.44
SDF4-204ENST00000459994 TMEM265A0A087WTH1 108 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 ADAMTS3O15072 1205 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 ATP9AO75110 1047 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 LGALS2P05162 132 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 TGFB3P10600 412 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 XBP1P17861 261 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
SDF4-204ENST00000459994 PPP1R18Q6NYC8 613 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 HEATR3Q7Z4Q2 680 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 C7orf31Q8N865 590 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.44
SDF4-204ENST00000459994 CUL5Q93034 780 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 C8orf76Q96K31 380 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 AIFM3Q96NN9 605 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 PSTPIP2Q9H939 334 aa17.77■□□□□ 0.44
SDF4-204ENST00000459994 REV3LO60673 3130 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 STXBP3O00186 592 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 NBNO60934 754 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 PPFIA4O75335 1185 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 ARHGEF15O94989 841 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 CKBP12277 381 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 FOSL2P15408 326 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 ITGB5P18084 799 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 SP4Q02446 784 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 BFSP2Q13515 415 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 MBTPS1Q14703 1052 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 TMCO2Q7Z6W1 182 aaPredicted RBP17.76■□□□□ 0.43
SDF4-204ENST00000459994 TEX2Q8IWB9 1127 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 USP38Q8NB14 1042 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 RETREG2Q8NC44 543 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 CCDC148Q8NFR7 591 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 MAFAQ8NHW3 353 aaPredicted RBP17.76■□□□□ 0.43
SDF4-204ENST00000459994 GPR20Q99678 358 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 KATNAL1Q9BW62 490 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 OSBPL7Q9BZF2 842 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 PRDM12Q9H4Q4 367 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 SLC4A7Q9Y6M7 1214 aa17.76■□□□□ 0.43
SDF4-204ENST00000459994 ESYT2A0FGR8 921 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 FIBPO43427 364 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 DDIT3P35638 169 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 TRIM29Q14134 588 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 GNPTABQ3T906 1256 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 PKD2L1Q9P0L9 805 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 PCDHA6Q9UN73 950 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 PCDHA8Q9Y5H6 950 aa17.75■□□□□ 0.43
SDF4-204ENST00000459994 H3BRB1 525 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 STAM2O75886 525 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 PFKMP08237 780 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 SELPP16109 830 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 KCNA2P16389 499 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 SYT1P21579 422 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 NAPAP54920 295 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 RBL2Q08999 1139 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 ADGRE1Q14246 886 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 KRT40Q6A162 431 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 METTL7BQ6UX53 244 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 CAGE1Q8TC20 777 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 AFAP1L1Q8TED9 768 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 PHF20Q9BVI0 1012 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 FTOQ9C0B1 505 aaKnown RBP eCLIP17.74■□□□□ 0.435e-8■□□□□ 8.3
SDF4-204ENST00000459994 ZMYND12Q9H0C1 365 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 GLT8D2Q9H1C3 349 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 TUT1Q9H6E5 874 aaKnown RBP17.74■□□□□ 0.43
SDF4-204ENST00000459994 TMEM260Q9NX78 707 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
SDF4-204ENST00000459994 SMIM10L2AP0DMW4 78 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 SMIM10L2BP0DMW5 78 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 ATP2A2P16615 1042 aaKnown RBP17.73■□□□□ 0.43
SDF4-204ENST00000459994 HOXC8P31273 242 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 RFC2P35250 354 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 PTK7Q13308 1070 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 RAB30Q15771 203 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 UTP14CQ5TAP6 766 aaKnown RBP17.73■□□□□ 0.43
SDF4-204ENST00000459994 SPRED2Q7Z698 418 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 CYP2W1Q8TAV3 490 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 MTIF3Q9H2K0 278 aaKnown RBP17.73■□□□□ 0.43
SDF4-204ENST00000459994 RNPEPQ9H4A4 650 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 GJB4Q9NTQ9 266 aa17.73■□□□□ 0.43
SDF4-204ENST00000459994 SMCO2A6NFE2 343 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 H3BQV1 296 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 NOP56O00567 594 aaKnown RBP17.72■□□□□ 0.43
SDF4-204ENST00000459994 TREHO43280 583 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 STX6O43752 255 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 GNA11P29992 359 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 NLRP5P59047 1200 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 DEFB103AP81534 67 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 NEDD9Q14511 834 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms