RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 FAM26FQ5R3K3 315 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 CERS5Q8N5B7 392 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
RETREG3-201ENST00000309428 RCCD1A6NED2 376 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 TTLL1O95922 423 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 HSPA1LP34931 641 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
RETREG3-201ENST00000309428 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 PHLDB2Q86SQ0 1253 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 TBC1D5Q92609 795 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 CXorf56Q9H5V9 222 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 NOVA2Q9UNW9 492 aaKnown RBP13.87□□□□□ -0.19
RETREG3-201ENST00000309428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
RETREG3-201ENST00000309428 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 MYBL2P10244 700 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
RETREG3-201ENST00000309428 GCKP35557 465 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 EPHB4P54760 987 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 CACNA2D3Q8IZS8 1091 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 ANKRD42Q8N9B4 389 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 STIM2Q9P246 746 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 MYO1AQ9UBC5 1043 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 GJC1P36383 396 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 NEDD1Q8NHV4 660 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 BHMT2Q9H2M3 363 aa13.87□□□□□ -0.19
RETREG3-201ENST00000309428 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 LGALS16A8MUM7 142 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 RBAK-RBAKDNI3L0D1 243 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 TBCAO75347 108 aaKnown RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 CCNE1P24864 410 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 CDC37Q16543 378 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 CDC42EP5Q6NZY7 148 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 ANKS4BQ8N8V4 417 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 NDST4Q9H3R1 872 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 PCDHA13Q9Y5I0 950 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 SLIT2O94813 1529 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 TRAPPC10P48553 1259 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 CCNI2Q6ZMN8 369 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 MYOCDQ8IZQ8 938 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 RSPH10B2B2RC85 870 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 RSPH10BP0C881 870 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 CARSP49589 748 aaKnown RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 ADAM9Q13443 819 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 ZKSCAN8Q15776 578 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 CDKAL1Q5VV42 579 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 PRAMEF18Q5VWM3 479 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 IRF2BP1Q8IU81 584 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 LBHD1Q9BQE6 289 aaPredicted RBP13.86□□□□□ -0.19
RETREG3-201ENST00000309428 NUP58Q9BVL2 599 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 PCIF1Q9H4Z3 704 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 SAMD15Q9P1V8 674 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
RETREG3-201ENST00000309428 COL4A1P02462 1669 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 LRRN2O75325 713 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 CRKP46108 304 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 VPS41P49754 854 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 SEPT7Q16181 437 aaKnown RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 THOC1Q96FV9 657 aaKnown RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 RSRC1Q96IZ7 334 aaKnown RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 MLXIPLQ9NP71 852 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 PSD3Q9NYI0 1048 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 KRIT1O00522 736 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 TMOD1P28289 359 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 ECE1P42892 770 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 PSMC6P62333 389 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 TBC1D1Q86TI0 1168 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 DDX42Q86XP3 938 aaKnown RBP eCLIP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 PLAAQ9Y263 795 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 COL18A1P39060 1754 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 MAP2K7O14733 419 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 NR2F2P24468 414 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 CALRP27797 417 aaKnown RBP13.85□□□□□ -0.19
RETREG3-201ENST00000309428 SFMBT2Q5VUG0 894 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 PEX26Q7Z412 305 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 TMOD2Q9NZR1 351 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 AKAP11Q9UKA4 1901 aa13.85□□□□□ -0.19
RETREG3-201ENST00000309428 DGKZQ13574 1117 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 ECM1Q16610 540 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 ARL6IP4Q66PJ3 421 aaKnown RBP13.84□□□□□ -0.19
RETREG3-201ENST00000309428 OSBPL9Q96SU4 736 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 CTNND1O60716 968 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms