RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Mmtag2Q99LX5 260 aaKnown RBP11.4□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ctnnbl1Q9CWL8 563 aaKnown RBP11.4□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Med10Q9CXU0 135 aa11.4□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gucy2cQ3UWA6 1072 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Snd1Q78PY7 910 aaKnown RBP11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Kctd6Q8BNL5 237 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Mettl24Q8CCB5 363 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Skor2A7M7C7 1008 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gm15448F6PZL4 682 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Adcy7P51829 1099 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Tfdp1Q08639 410 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gprin1Q3UNH4 932 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Abhd15Q5F2F2 459 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Zfp397Q7TNK4 527 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ccdc73Q8CDM4 1066 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Cd209bQ8CJ91 325 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Rab3il1Q8VDV3 383 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Tgs1Q923W1 853 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Fam217aQ9D9W6 419 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Trpc3Q9QZC1 836 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Lrrc38A2VDH3 298 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Spdye4aQ5IBH6 268 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ahcyl2Q68FL4 613 aaKnown RBP11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Smc1bQ920F6 1248 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 CluhQ5SW19 1315 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Dcdc2bF7BCK0 340 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Lig1P37913 916 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 E2f8Q58FA4 860 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Arid5bQ8BM75 1188 aaKnown RBP11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Abhd2Q9QXM0 425 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Vnn1Q9Z0K8 512 aa11.39□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gm2030D3Z7C4 212 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Timm44O35857 452 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Tmod1P49813 359 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Kcnj4P52189 445 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Stmn4P63042 189 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Cracr2bQ80ZJ8 394 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Mei4Q8BRM6 389 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gle1Q8R322 699 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Atp1a1Q8VDN2 1023 aaKnown RBP11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Zbed3Q9D0L1 228 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Itga2bQ9QUM0 1033 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Znfx1Q8R151 1909 aaKnown RBP11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Usp17ldG5E8G2 545 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Usp17lcG5E8I7 545 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Pik3caP42337 1068 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 KaznQ69ZS8 779 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Kcnk18Q6VV64 394 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gigyf2Q6Y7W8 1291 aaKnown RBP11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Adgra1Q8C4G9 578 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gprc5cQ8K3J9 440 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Bhmt2Q91WS4 363 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Grtp1Q9D3N8 359 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Tpcn1Q9EQJ0 817 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Arhgef7Q9ES28 862 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Col1a1P11087 1453 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 A0A286YCQ6 122 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Myo1fP70248 1099 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 StamP70297 548 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Asap3Q5U464 904 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 CtcfQ61164 736 aaKnown RBP11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Siglec10Q80ZE3 688 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Abcb6Q9DC29 842 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Bub1bQ9Z1S0 1052 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ttc38A3KMP2 465 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Man1a2P39098 641 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Rps6P62754 249 aaKnown RBP11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Capza3P70190 299 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Nlrp4cQ3TKR3 982 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Prom2Q3UUY6 835 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ppp1r13bQ62415 1087 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Q8C5C9 218 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Dcaf8Q8N7N5 591 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ttc8Q8VD72 515 aa11.38□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Trim30cD3YVI9 513 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Rfpl4bJ3QPR6 266 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Klrk1O54709 232 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Slc4a7Q8BTY2 1034 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Cdr2P97817 455 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Kcnma1Q08460 1209 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Mphosph8Q3TYA6 858 aaKnown RBP11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Mpp4Q6P7F1 635 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Lrsam1Q80ZI6 727 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Hgh1Q8C3I8 393 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ago4Q8CJF8 861 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Anapc4Q91W96 807 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 FibpQ9JI19 357 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Jag1Q9QXX0 1218 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ddx25Q9QY15 484 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Noc2lQ9WV70 747 aaKnown RBP11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Gm5737A0A140LI11 423 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Apol6B7ZC55 329 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ugt1a6bK9J7B2 531 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Hdhd2Q3UGR5 259 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ugt1a6Q64435 531 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 GartQ64737 1010 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Krit1Q6S5J6 736 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Ugt1a7cQ6ZQM8 531 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Acad11Q80XL6 779 aa11.37□□□□□ -0.59
Ldb3-205ENSMUST00000090040 Tbc1d10cQ8C9V1 444 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms