Protein–RNA interactions for Protein: A2VDH3

Lrrc38, Leucine-rich repeat-containing protein 38, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc38A2VDH3 Gm25239-201ENSMUST00000174915 86 ntBASIC40.84■■■■■ 4.13
Lrrc38A2VDH3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Lrrc38A2VDH3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
Lrrc38A2VDH3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
Lrrc38A2VDH3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
Lrrc38A2VDH3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.35■■■■□ 3.41
Lrrc38A2VDH3 Gm15042-201ENSMUST00000120212 883 ntBASIC36.17■■■■□ 3.38
Lrrc38A2VDH3 Gm15045-201ENSMUST00000117359 883 ntBASIC35.47■■■■□ 3.27
Lrrc38A2VDH3 Gm24109-201ENSMUST00000175489 103 ntBASIC35.19■■■■□ 3.22
Lrrc38A2VDH3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Lrrc38A2VDH3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Lrrc38A2VDH3 Psd-208ENSMUST00000224556 2034 ntBASIC34.85■■■■□ 3.17
Lrrc38A2VDH3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.53■■■■□ 3.12
Lrrc38A2VDH3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
Lrrc38A2VDH3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
Lrrc38A2VDH3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Lrrc38A2VDH3 Gm23366-201ENSMUST00000175022 89 ntBASIC34.18■■■■□ 3.06
Lrrc38A2VDH3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Lrrc38A2VDH3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Lrrc38A2VDH3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
Lrrc38A2VDH3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Lrrc38A2VDH3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
Lrrc38A2VDH3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.8■■■■□ 3
Lrrc38A2VDH3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
Lrrc38A2VDH3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Lrrc38A2VDH3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Lrrc38A2VDH3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.7■■■□□ 2.99
Lrrc38A2VDH3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Lrrc38A2VDH3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Lrrc38A2VDH3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Lrrc38A2VDH3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
Lrrc38A2VDH3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.27■■■□□ 2.92
Lrrc38A2VDH3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.18■■■□□ 2.9
Lrrc38A2VDH3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Lrrc38A2VDH3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Lrrc38A2VDH3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Lrrc38A2VDH3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Lrrc38A2VDH3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Lrrc38A2VDH3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Lrrc38A2VDH3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.68■■■□□ 2.82
Lrrc38A2VDH3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Lrrc38A2VDH3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.5■■■□□ 2.79
Lrrc38A2VDH3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.31■■■□□ 2.76
Lrrc38A2VDH3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Lrrc38A2VDH3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lrrc38A2VDH3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Lrrc38A2VDH3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Lrrc38A2VDH3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Lrrc38A2VDH3 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.2■■■□□ 2.74
Lrrc38A2VDH3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
Lrrc38A2VDH3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Lrrc38A2VDH3 Gm25238-201ENSMUST00000174914 89 ntBASIC32.08■■■□□ 2.73
Lrrc38A2VDH3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Lrrc38A2VDH3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32■■■□□ 2.71
Lrrc38A2VDH3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Lrrc38A2VDH3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Lrrc38A2VDH3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Lrrc38A2VDH3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Lrrc38A2VDH3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Lrrc38A2VDH3 Gm27325-201ENSMUST00000175467 74 ntBASIC31.81■■■□□ 2.68
Lrrc38A2VDH3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Lrrc38A2VDH3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.7■■■□□ 2.67
Lrrc38A2VDH3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.66■■■□□ 2.66
Lrrc38A2VDH3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.64■■■□□ 2.66
Lrrc38A2VDH3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Lrrc38A2VDH3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Lrrc38A2VDH3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.61■■■□□ 2.65
Lrrc38A2VDH3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Lrrc38A2VDH3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Lrrc38A2VDH3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Lrrc38A2VDH3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
Lrrc38A2VDH3 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.5■■■□□ 2.63
Lrrc38A2VDH3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Lrrc38A2VDH3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Lrrc38A2VDH3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Lrrc38A2VDH3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Lrrc38A2VDH3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.23■■■□□ 2.59
Lrrc38A2VDH3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.2■■■□□ 2.59
Lrrc38A2VDH3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Lrrc38A2VDH3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Lrrc38A2VDH3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.08■■■□□ 2.57
Lrrc38A2VDH3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Lrrc38A2VDH3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Lrrc38A2VDH3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Lrrc38A2VDH3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.95■■■□□ 2.55
Lrrc38A2VDH3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Lrrc38A2VDH3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
Lrrc38A2VDH3 Rab21-202ENSMUST00000218831 843 ntBASIC30.91■■■□□ 2.54
Lrrc38A2VDH3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Lrrc38A2VDH3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Lrrc38A2VDH3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Lrrc38A2VDH3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Lrrc38A2VDH3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Lrrc38A2VDH3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Lrrc38A2VDH3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.74■■■□□ 2.51
Lrrc38A2VDH3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.73■■■□□ 2.51
Lrrc38A2VDH3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Lrrc38A2VDH3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Lrrc38A2VDH3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Lrrc38A2VDH3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms