RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 NischQ80TM9 1593 aa19.49■□□□□ 0.71
Ldb3-205ENSMUST00000090040 Rhox8Q6VSS7 320 aa19.12■□□□□ 0.65
Ldb3-205ENSMUST00000090040 Abcc9P70170 1546 aa18.64■□□□□ 0.57
Ldb3-205ENSMUST00000090040 Gm35339A0A140LHH9 1649 aa18.55■□□□□ 0.56
Ldb3-205ENSMUST00000090040 Abcc8B2RUS7 1588 aa18.33■□□□□ 0.52
Ldb3-205ENSMUST00000090040 Ccdc136Q3TVA9 1136 aa17.41■□□□□ 0.38
Ldb3-205ENSMUST00000090040 Rtl1Q7M732 1744 aa17.37■□□□□ 0.37
Ldb3-205ENSMUST00000090040 Trim41Q5NCC3 630 aa17.25■□□□□ 0.35
Ldb3-205ENSMUST00000090040 Ccdc180J3QNE4 1664 aa17.15■□□□□ 0.34
Ldb3-205ENSMUST00000090040 Zcchc6Q5BLK4 1491 aaKnown RBP17.11■□□□□ 0.33
Ldb3-205ENSMUST00000090040 NacadQ5SWP3 1504 aa17.11■□□□□ 0.33
Ldb3-205ENSMUST00000090040 Dcaf1Q80TR8 1506 aa17.08■□□□□ 0.33
Ldb3-205ENSMUST00000090040 Rb1cc1Q9ESK9 1588 aa17.07■□□□□ 0.32
Ldb3-205ENSMUST00000090040 Esf1Q3V1V3 845 aaKnown RBP17.04■□□□□ 0.32
Ldb3-205ENSMUST00000090040 Cngb1E1AZ71 1325 aa16.96■□□□□ 0.31
Ldb3-205ENSMUST00000090040 Kdm5dQ62240 1548 aa16.92■□□□□ 0.3
Ldb3-205ENSMUST00000090040 ScribQ80U72 1612 aa16.85■□□□□ 0.29
Ldb3-205ENSMUST00000090040 Baz1aO88379 1555 aa16.82■□□□□ 0.28
Ldb3-205ENSMUST00000090040 HrcG5E8J6 738 aa16.72■□□□□ 0.27
Ldb3-205ENSMUST00000090040 Sycp2Q9CUU3 1500 aa16.54■□□□□ 0.24
Ldb3-205ENSMUST00000090040 Brd4Q9ESU6 1400 aaKnown RBP16.54■□□□□ 0.24
Ldb3-205ENSMUST00000090040 Gab3Q8BSM5 595 aa16.51■□□□□ 0.23
Ldb3-205ENSMUST00000090040 Crybg2B7ZCC2 1516 aa16.49■□□□□ 0.23
Ldb3-205ENSMUST00000090040 Rpgrip1Q9EPQ2 1331 aa16.44■□□□□ 0.22
Ldb3-205ENSMUST00000090040 Npm2Q80W85 207 aa16.38■□□□□ 0.21
Ldb3-205ENSMUST00000090040 Ehmt2Q9Z148 1263 aaKnown RBP16.35■□□□□ 0.21
Ldb3-205ENSMUST00000090040 Zeb1Q64318 1117 aa16.26■□□□□ 0.19
Ldb3-205ENSMUST00000090040 Smarca2Q6DIC0 1577 aa16.19■□□□□ 0.18
Ldb3-205ENSMUST00000090040 Myt1lP97500 1187 aa16.18■□□□□ 0.18
Ldb3-205ENSMUST00000090040 Il27Q8K3I6 234 aa16.15■□□□□ 0.18
Ldb3-205ENSMUST00000090040 Cep164Q5DU05 1446 aa16.08■□□□□ 0.16
Ldb3-205ENSMUST00000090040 Pds5bQ4VA53 1446 aaKnown RBP16.07■□□□□ 0.16
Ldb3-205ENSMUST00000090040 Golga3P55937 1487 aa16.05■□□□□ 0.16
Ldb3-205ENSMUST00000090040 Cecr2E9Q2Z1 1453 aa15.98■□□□□ 0.15
Ldb3-205ENSMUST00000090040 Ercc6F8VPZ5 1481 aa15.97■□□□□ 0.15
Ldb3-205ENSMUST00000090040 Chic1Q8CBW7 227 aa15.96■□□□□ 0.15
Ldb3-205ENSMUST00000090040 Npm1Q61937 292 aaKnown RBP15.94■□□□□ 0.14
Ldb3-205ENSMUST00000090040 CftrP26361 1476 aa15.9■□□□□ 0.14
Ldb3-205ENSMUST00000090040 Acin1Q9JIX8 1338 aaKnown RBP15.89■□□□□ 0.13
Ldb3-205ENSMUST00000090040 Smarca4Q3TKT4 1613 aaKnown RBP15.88■□□□□ 0.13
Ldb3-205ENSMUST00000090040 Atad2bE9Q166 1460 aaKnown RBP15.88■□□□□ 0.13
Ldb3-205ENSMUST00000090040 Ubl4bQ9CQ84 188 aa15.86■□□□□ 0.13
Ldb3-205ENSMUST00000090040 Rsf1E9PWW9 1441 aaKnown RBP15.83■□□□□ 0.12
Ldb3-205ENSMUST00000090040 Synj1Q8CHC4 1574 aa15.82■□□□□ 0.12
Ldb3-205ENSMUST00000090040 BicraF8VPZ9 1578 aa15.82■□□□□ 0.12
Ldb3-205ENSMUST00000090040 Cttnbp2B9EJA2 1648 aa15.76■□□□□ 0.11
Ldb3-205ENSMUST00000090040 UbtfP25976 765 aaKnown RBP15.75■□□□□ 0.11
Ldb3-205ENSMUST00000090040 Kif15Q6P9L6 1387 aa15.74■□□□□ 0.11
Ldb3-205ENSMUST00000090040 Iqgap2Q3UQ44 1575 aa15.68■□□□□ 0.1
Ldb3-205ENSMUST00000090040 Fmn1Q05860 1466 aa15.68■□□□□ 0.1
Ldb3-205ENSMUST00000090040 Las1lA2BE28 776 aaKnown RBP15.66■□□□□ 0.1
Ldb3-205ENSMUST00000090040 NefmP08553 848 aa15.66■□□□□ 0.1
Ldb3-205ENSMUST00000090040 Ccdc88bQ4QRL3 1481 aa15.63■□□□□ 0.09
Ldb3-205ENSMUST00000090040 Ccdc18Q640L5 1455 aa15.63■□□□□ 0.09
Ldb3-205ENSMUST00000090040 Ube2uB1AUC4 352 aa15.59■□□□□ 0.09
Ldb3-205ENSMUST00000090040 Ap3b1Q9Z1T1 1105 aa15.59■□□□□ 0.09
Ldb3-205ENSMUST00000090040 Phldb1Q6PDH0 1371 aaKnown RBP15.56■□□□□ 0.08
Ldb3-205ENSMUST00000090040 Clip1Q922J3 1391 aa15.49■□□□□ 0.07
Ldb3-205ENSMUST00000090040 Pelp1Q9DBD5 1123 aaKnown RBP15.49■□□□□ 0.07
Ldb3-205ENSMUST00000090040 Wdr66E9Q743 1299 aa15.42■□□□□ 0.06
Ldb3-205ENSMUST00000090040 Plekhg3Q4VAC9 1341 aa15.4■□□□□ 0.06
Ldb3-205ENSMUST00000090040 Cux2P70298 1426 aa15.38■□□□□ 0.05
Ldb3-205ENSMUST00000090040 Mier1Q5UAK0 511 aa15.36■□□□□ 0.05
Ldb3-205ENSMUST00000090040 Frmpd1A2AKB4 1549 aa15.35■□□□□ 0.05
Ldb3-205ENSMUST00000090040 Fam50aQ9WV03 339 aaKnown RBP15.33■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Cep162Q6ZQ06 1403 aa15.33■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Wdr62Q3U3T8 1523 aa15.3■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Lmod2Q3UHZ5 550 aa15.3■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Setd5Q5XJV7 1441 aa15.3■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Top2bQ64511 1612 aa15.28■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Cc2d2aQ8CFW7 1633 aa15.28■□□□□ 0.04
Ldb3-205ENSMUST00000090040 Eea1Q8BL66 1411 aa15.27■□□□□ 0.03
Ldb3-205ENSMUST00000090040 Rapgef2Q8CHG7 1496 aa15.22■□□□□ 0.03
Ldb3-205ENSMUST00000090040 Top2aQ01320 1528 aaKnown RBP15.22■□□□□ 0.03
Ldb3-205ENSMUST00000090040 LrpprcQ6PB66 1392 aaKnown RBP15.2■□□□□ 0.02
Ldb3-205ENSMUST00000090040 BlmO88700 1416 aa15.16■□□□□ 0.02
Ldb3-205ENSMUST00000090040 Baz1bQ9Z277 1479 aa15.13■□□□□ 0.01
Ldb3-205ENSMUST00000090040 NclP09405 707 aaKnown RBP15.13■□□□□ 0.01
Ldb3-205ENSMUST00000090040 TonslQ6NZL6 1363 aa15.11■□□□□ 0.01
Ldb3-205ENSMUST00000090040 Dhx29Q6PGC1 1365 aaKnown RBP15.1■□□□□ 0.01
Ldb3-205ENSMUST00000090040 Lamc3Q9R0B6 1581 aa15.09■□□□□ 0.01
Ldb3-205ENSMUST00000090040 Shroom4Q1W617 1475 aa15.06■□□□□ 0
Ldb3-205ENSMUST00000090040 Carmil1Q6EDY6 1374 aa15.06■□□□□ 0
Ldb3-205ENSMUST00000090040 NrkQ9R0G8 1455 aa15.06■□□□□ 0
Ldb3-205ENSMUST00000090040 Efcab5A0JP43 1406 aa15.06■□□□□ 0
Ldb3-205ENSMUST00000090040 Mrc2Q64449 1479 aa15.01□□□□□ -0.01
Ldb3-205ENSMUST00000090040 Ccer2J3QPU5 274 aa15.01□□□□□ -0.01
Ldb3-205ENSMUST00000090040 Grin2bQ01097 1482 aa15□□□□□ -0.01
Ldb3-205ENSMUST00000090040 Arhgap27A2AB59 869 aa14.99□□□□□ -0.01
Ldb3-205ENSMUST00000090040 Camsap1A2AHC3 1581 aa14.99□□□□□ -0.01
Ldb3-205ENSMUST00000090040 Fkbp15Q6P9Q6 1216 aaKnown RBP14.98□□□□□ -0.01
Ldb3-205ENSMUST00000090040 PogzQ8BZH4 1409 aaKnown RBP14.96□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Cdk11bP24788 784 aaKnown RBP14.95□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Duox2A2AQ99 1517 aa14.95□□□□□ -0.02
Ldb3-205ENSMUST00000090040 CntlnA2AM05 1397 aa14.93□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Rpap1Q80TE0 1409 aa14.93□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Aebp1Q640N1 1128 aa14.93□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Pcgf6Q99NA9 353 aa14.92□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Arhgap35Q91YM2 1499 aa14.92□□□□□ -0.02
Ldb3-205ENSMUST00000090040 Map3k1P53349 1493 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms