Protein–RNA interactions for Protein: Q8CJF8

Ago4, Protein argonaute-4, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ago4Q8CJF8 Gm25239-201ENSMUST00000174915 86 ntBASIC42.78■■■■■ 4.44
Ago4Q8CJF8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
Ago4Q8CJF8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
Ago4Q8CJF8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
Ago4Q8CJF8 Gm15042-201ENSMUST00000120212 883 ntBASIC37.58■■■■□ 3.61
Ago4Q8CJF8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
Ago4Q8CJF8 Gm24109-201ENSMUST00000175489 103 ntBASIC36.99■■■■□ 3.51
Ago4Q8CJF8 Gm15045-201ENSMUST00000117359 883 ntBASIC36.82■■■■□ 3.48
Ago4Q8CJF8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.68■■■■□ 3.46
Ago4Q8CJF8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Ago4Q8CJF8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.1■■■■□ 3.37
Ago4Q8CJF8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
Ago4Q8CJF8 Gm23366-201ENSMUST00000175022 89 ntBASIC35.73■■■■□ 3.31
Ago4Q8CJF8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Ago4Q8CJF8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
Ago4Q8CJF8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.31■■■■□ 3.24
Ago4Q8CJF8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Ago4Q8CJF8 Psd-208ENSMUST00000224556 2034 ntBASIC35.05■■■■□ 3.2
Ago4Q8CJF8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ago4Q8CJF8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ago4Q8CJF8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ago4Q8CJF8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.84■■■■□ 3.17
Ago4Q8CJF8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
Ago4Q8CJF8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
Ago4Q8CJF8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.63■■■■□ 3.13
Ago4Q8CJF8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Ago4Q8CJF8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.5■■■■□ 3.11
Ago4Q8CJF8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.5■■■■□ 3.11
Ago4Q8CJF8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Ago4Q8CJF8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.25■■■■□ 3.07
Ago4Q8CJF8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ago4Q8CJF8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.96■■■■□ 3.03
Ago4Q8CJF8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.94■■■■□ 3.02
Ago4Q8CJF8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Ago4Q8CJF8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Ago4Q8CJF8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ago4Q8CJF8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ago4Q8CJF8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Ago4Q8CJF8 Gm25238-201ENSMUST00000174914 89 ntBASIC33.72■■■□□ 2.99
Ago4Q8CJF8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Ago4Q8CJF8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.62■■■□□ 2.97
Ago4Q8CJF8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ago4Q8CJF8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ago4Q8CJF8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.3■■■□□ 2.92
Ago4Q8CJF8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ago4Q8CJF8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ago4Q8CJF8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ago4Q8CJF8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ago4Q8CJF8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.07■■■□□ 2.88
Ago4Q8CJF8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
Ago4Q8CJF8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.01■■■□□ 2.87
Ago4Q8CJF8 Gm27325-201ENSMUST00000175467 74 ntBASIC33■■■□□ 2.87
Ago4Q8CJF8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Ago4Q8CJF8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Ago4Q8CJF8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Ago4Q8CJF8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Ago4Q8CJF8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.69■■■□□ 2.82
Ago4Q8CJF8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.68■■■□□ 2.82
Ago4Q8CJF8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ago4Q8CJF8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ago4Q8CJF8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Ago4Q8CJF8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.58■■■□□ 2.81
Ago4Q8CJF8 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.57■■■□□ 2.8
Ago4Q8CJF8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Ago4Q8CJF8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.52■■■□□ 2.8
Ago4Q8CJF8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ago4Q8CJF8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ago4Q8CJF8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Ago4Q8CJF8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Ago4Q8CJF8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ago4Q8CJF8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ago4Q8CJF8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
Ago4Q8CJF8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ago4Q8CJF8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Ago4Q8CJF8 Rab21-202ENSMUST00000218831 843 ntBASIC32.23■■■□□ 2.75
Ago4Q8CJF8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.17■■■□□ 2.74
Ago4Q8CJF8 Gm25262-201ENSMUST00000174934 133 ntBASIC32.14■■■□□ 2.74
Ago4Q8CJF8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.14■■■□□ 2.74
Ago4Q8CJF8 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.11■■■□□ 2.73
Ago4Q8CJF8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ago4Q8CJF8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.1■■■□□ 2.73
Ago4Q8CJF8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ago4Q8CJF8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ago4Q8CJF8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
Ago4Q8CJF8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ago4Q8CJF8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ago4Q8CJF8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.83■■■□□ 2.69
Ago4Q8CJF8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ago4Q8CJF8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ago4Q8CJF8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.76■■■□□ 2.67
Ago4Q8CJF8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Ago4Q8CJF8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ago4Q8CJF8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ago4Q8CJF8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ago4Q8CJF8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ago4Q8CJF8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.6■■■□□ 2.65
Ago4Q8CJF8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Ago4Q8CJF8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Ago4Q8CJF8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ago4Q8CJF8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms