RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 RIP1P08067 215 aa2.14□□□□□ -2.07
snR54snR54 RPL3P14126 387 aaKnown RBP2.14□□□□□ -2.07
snR54snR54 RAD57P25301 460 aa2.14□□□□□ -2.07
snR54snR54 NPL6P32832 435 aa2.14□□□□□ -2.07
snR54snR54 HCS1P34243 683 aa2.14□□□□□ -2.07
snR54snR54 ESL1P40456 1118 aa2.14□□□□□ -2.07
snR54snR54 YJR085CP47131 105 aaKnown RBP2.14□□□□□ -2.07
snR54snR54 AZR1P50080 613 aa2.14□□□□□ -2.07
snR54snR54 MDG1P53885 366 aa2.14□□□□□ -2.07
snR54snR54 RNY1Q02933 434 aaKnown RBP2.14□□□□□ -2.07
snR54snR54 RQC1Q05468 723 aaKnown RBP2.14□□□□□ -2.07
snR54snR54 SIL1Q08199 421 aa2.14□□□□□ -2.07
snR54snR54 SGT1Q08446 395 aa2.14□□□□□ -2.07
snR54snR54 RMD5Q12508 421 aa2.14□□□□□ -2.07
snR54snR54 PHB2P50085 310 aa2.13□□□□□ -2.07
snR54snR54 BET5Q03630 159 aa2.13□□□□□ -2.07
snR54snR54 GPH1P06738 902 aaKnown RBP2.12□□□□□ -2.07
snR54snR54 IMP2'P32351 346 aa2.12□□□□□ -2.07
snR54snR54 MID2P36027 376 aa2.12□□□□□ -2.07
snR54snR54 RFC3P38629 340 aa2.12□□□□□ -2.07
snR54snR54 MIG3P39943 394 aa2.12□□□□□ -2.07
snR54snR54 JLP2P40206 208 aa2.12□□□□□ -2.07
snR54snR54 GIR2Q03768 265 aaPredicted RBP2.12□□□□□ -2.07
snR54snR54 MDM30Q05930 598 aa2.12□□□□□ -2.07
snR54snR54 GRX6Q12438 231 aa2.12□□□□□ -2.07
snR54snR54 IZH2Q12442 317 aa2.12□□□□□ -2.07
snR54snR54 MET17P06106 444 aa2.11□□□□□ -2.07
snR54snR54 NAM2P11325 894 aa2.11□□□□□ -2.07
snR54snR54 SIN4P32259 974 aa2.11□□□□□ -2.07
snR54snR54 SMF1P38925 575 aa2.11□□□□□ -2.07
snR54snR54 RHO5P53879 331 aaKnown RBP2.11□□□□□ -2.07
snR54snR54 NUP116Q02630 1113 aa2.11□□□□□ -2.07
snR54snR54 REX4Q08237 289 aa2.11□□□□□ -2.07
snR54snR54 SPO12P17123 173 aa2.1□□□□□ -2.07
snR54snR54 CTR86P25355 563 aa2.1□□□□□ -2.07
snR54snR54 HIR2P32480 875 aa2.1□□□□□ -2.07
snR54snR54 YJR011CP47086 261 aaPredicted RBP2.1□□□□□ -2.07
snR54snR54 MDE1P47095 244 aa2.1□□□□□ -2.07
snR54snR54 BCH1Q05029 724 aa2.1□□□□□ -2.07
snR54snR54 BEM1P29366 551 aa2.09□□□□□ -2.07
snR54snR54 RML2P32611 393 aa2.09□□□□□ -2.07
snR54snR54 ARA1P38115 344 aa2.09□□□□□ -2.07
snR54snR54 ARF3P40994 183 aaRIP-Chip data2.09□□□□□ -2.07not detected
snR54snR54 RPS0BP46654 252 aaKnown RBP2.09□□□□□ -2.07
snR54snR54 MNP1P53163 194 aaPredicted RBP2.09□□□□□ -2.07
snR54snR54 GPI15P53961 229 aa2.09□□□□□ -2.07
snR54snR54 RPA49Q01080 415 aaPredicted RBP2.09□□□□□ -2.07
snR54snR54 ADA2Q02336 434 aa2.09□□□□□ -2.07
snR54snR54 SKI7Q08491 747 aaPredicted RBP2.09□□□□□ -2.07
snR54snR54 PLP2Q12017 286 aa2.09□□□□□ -2.07
snR54snR54 ROX1P25042 368 aa2.08□□□□□ -2.08
snR54snR54 RHB1P25378 209 aa2.08□□□□□ -2.08
snR54snR54 SOR1P35497 357 aaKnown RBP2.08□□□□□ -2.08
snR54snR54 APE3P37302 537 aaKnown RBP2.08□□□□□ -2.08
snR54snR54 RTC2P38279 296 aa2.08□□□□□ -2.08
snR54snR54 OTU2P38747 307 aaKnown RBP2.08□□□□□ -2.08
snR54snR54 YER186CP40101 306 aa2.08□□□□□ -2.08
snR54snR54 OAZ1Q02803 292 aa2.08□□□□□ -2.08
snR54snR54 GIP3Q03016 1276 aa2.08□□□□□ -2.08
snR54snR54 LIP2Q06005 328 aa2.08□□□□□ -2.08
snR54snR54 SOR2Q07786 357 aa2.08□□□□□ -2.08
snR54snR54 MED1Q12321 566 aa2.08□□□□□ -2.08
snR54snR54 YOL159C-AQ3E769 90 aa2.08□□□□□ -2.08
snR54snR54 YBL111CQ3E7Y5 667 aa2.08□□□□□ -2.08
snR54snR54 SPO7P18410 259 aa2.07□□□□□ -2.08
snR54snR54 SPT10P35208 640 aa2.07□□□□□ -2.08
snR54snR54 SBE22P38814 852 aa2.07□□□□□ -2.08
snR54snR54 PCF11P39081 626 aaPredicted RBP2.07□□□□□ -2.08
snR54snR54 DFG10P40526 253 aa2.07□□□□□ -2.08
snR54snR54 SFH5P47008 294 aa2.07□□□□□ -2.08
snR54snR54 VTA1Q06263 330 aa2.07□□□□□ -2.08
snR54snR54 SRL2Q12020 392 aa2.07□□□□□ -2.08
snR54snR54 CKA1P15790 372 aa2.06□□□□□ -2.08
snR54snR54 CLN1P20437 546 aa2.06□□□□□ -2.08
snR54snR54 GEX1P25596 615 aa2.06□□□□□ -2.08
snR54snR54 KRE2P27809 442 aa2.06□□□□□ -2.08
snR54snR54 SMY1P32364 656 aaKnown RBP2.06□□□□□ -2.08
snR54snR54 SAS3P34218 831 aa2.06□□□□□ -2.08
snR54snR54 BAT1P38891 393 aaKnown RBP2.06□□□□□ -2.08
snR54snR54 SEO1P39709 593 aa2.06□□□□□ -2.08
snR54snR54 YIL029CP40538 142 aa2.06□□□□□ -2.08
snR54snR54 IRC6P43615 237 aa2.06□□□□□ -2.08
snR54snR54 DLD2P46681 530 aaKnown RBP2.06□□□□□ -2.08
snR54snR54 FMS1P50264 508 aa2.06□□□□□ -2.08
snR54snR54 MTQ1P53944 314 aa2.06□□□□□ -2.08
snR54snR54 RIF2Q06208 395 aa2.06□□□□□ -2.08
snR54snR54 SMF3Q12078 473 aaPredicted RBP2.06□□□□□ -2.08
snR54snR54 VAM3Q12241 283 aa2.06□□□□□ -2.08
snR54snR54 AAT2P23542 418 aaKnown RBP2.05□□□□□ -2.08
snR54snR54 IES6P32617 166 aa2.05□□□□□ -2.08
snR54snR54 UTP9P38882 575 aaKnown RBP2.05□□□□□ -2.08
snR54snR54 YAL037WP39728 267 aa2.05□□□□□ -2.08
snR54snR54 PHO86P46956 311 aa2.05□□□□□ -2.08
snR54snR54 BIR1P47134 954 aa2.05□□□□□ -2.08
snR54snR54 YDL121CQ07541 149 aa2.05□□□□□ -2.08
snR54snR54 RRI2Q12348 645 aa2.05□□□□□ -2.08
snR54snR54 JID1Q12350 301 aa2.05□□□□□ -2.08
snR54snR54 RTN2Q12443 393 aa2.05□□□□□ -2.08
snR54snR54 MRP7P12687 371 aa2.04□□□□□ -2.08
snR54snR54 PSK1P31374 1356 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms