RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W ATP22P50273 684 aaPredicted RBP2.48□□□□□ -2.01
PEP12YOR036W TOF1P53840 1238 aa2.48□□□□□ -2.01
PEP12YOR036W IRC15Q02733 499 aa2.48□□□□□ -2.01
PEP12YOR036W RLI1Q03195 608 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W PPM1Q04081 328 aa2.48□□□□□ -2.01
PEP12YOR036W HCR1Q05775 265 aaKnown RBP2.48□□□□□ -2.01
PEP12YOR036W BUG1Q12191 341 aa2.48□□□□□ -2.01
PEP12YOR036W VMA2P16140 517 aaKnown RBP2.47□□□□□ -2.01
PEP12YOR036W DAP2P18962 818 aa2.47□□□□□ -2.01
PEP12YOR036W RPI1P23250 407 aaKnown RBP2.47□□□□□ -2.01
PEP12YOR036W CTR86P25355 563 aa2.47□□□□□ -2.01
PEP12YOR036W TOA1P32773 286 aa2.47□□□□□ -2.01
PEP12YOR036W LAS1P36146 502 aaPredicted RBP2.47□□□□□ -2.01
PEP12YOR036W ADH5P38113 351 aaKnown RBP2.47□□□□□ -2.01
PEP12YOR036W SIF2P38262 535 aa2.47□□□□□ -2.01
PEP12YOR036W GAT2P40209 560 aa2.47□□□□□ -2.01
PEP12YOR036W DIM1P41819 318 aaKnown RBP2.47□□□□□ -2.01
PEP12YOR036W GWT1P47026 490 aa2.47□□□□□ -2.01
PEP12YOR036W ARK1P53974 638 aa2.47□□□□□ -2.01
PEP12YOR036W PNG1Q02890 363 aa2.47□□□□□ -2.01
PEP12YOR036W YDR541CQ03049 344 aa2.47□□□□□ -2.01
PEP12YOR036W YDR415CQ04033 374 aaPredicted RBP2.47□□□□□ -2.01
PEP12YOR036W YDR387CQ04162 555 aa2.47□□□□□ -2.01
PEP12YOR036W URH1Q04179 340 aa2.47□□□□□ -2.01
PEP12YOR036W YFH1Q07540 174 aa2.47□□□□□ -2.01
PEP12YOR036W TLG2Q08144 397 aa2.47□□□□□ -2.01
PEP12YOR036W CSR2Q12734 1121 aa2.47□□□□□ -2.01
PEP12YOR036W RPL6BP05739 176 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W MRS3P10566 314 aa2.46□□□□□ -2.02
PEP12YOR036W ALG1P16661 449 aa2.46□□□□□ -2.02
PEP12YOR036W PHO84P25297 587 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W HSP104P31539 908 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W RIM1P32445 135 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W YEL043WP32618 956 aa2.46□□□□□ -2.02
PEP12YOR036W MRPL4P36517 319 aa2.46□□□□□ -2.02
PEP12YOR036W PFF1P38244 976 aa2.46□□□□□ -2.02
PEP12YOR036W RRP4P38792 359 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W WSS1P38838 269 aa2.46□□□□□ -2.02
PEP12YOR036W GPI16P38875 610 aa2.46□□□□□ -2.02
PEP12YOR036W HAT2P39984 401 aa2.46□□□□□ -2.02
PEP12YOR036W ISC1P40015 477 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W YJL070CP40361 888 aa2.46□□□□□ -2.02
PEP12YOR036W CHS6P40955 746 aa2.46□□□□□ -2.02
PEP12YOR036W GCD10P41814 478 aa2.46□□□□□ -2.02
PEP12YOR036W ELP2P42935 788 aa2.46□□□□□ -2.02
PEP12YOR036W FYV8P46949 817 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W YIP1P53039 248 aa2.46□□□□□ -2.02
PEP12YOR036W PCP1P53259 346 aa2.46□□□□□ -2.02
PEP12YOR036W YIF1P53845 314 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W GPI15P53961 229 aa2.46□□□□□ -2.02
PEP12YOR036W MEH1Q02205 184 aa2.46□□□□□ -2.02
PEP12YOR036W RPL6AQ02326 176 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W GIP3Q03016 1276 aa2.46□□□□□ -2.02
PEP12YOR036W ODC1Q03028 310 aa2.46□□□□□ -2.02
PEP12YOR036W DBP9Q06218 594 aaKnown RBP2.46□□□□□ -2.02
PEP12YOR036W NSE1Q07913 336 aa2.46□□□□□ -2.02
PEP12YOR036W SGT1Q08446 395 aa2.46□□□□□ -2.02
PEP12YOR036W SKI7Q08491 747 aaPredicted RBP2.46□□□□□ -2.02
PEP12YOR036W ATG34Q12292 412 aa2.46□□□□□ -2.02
PEP12YOR036W TFB5Q3E7C1 72 aaPredicted RBP2.46□□□□□ -2.02
PEP12YOR036W YBR298C-AQ8TGK4 73 aa2.46□□□□□ -2.02
PEP12YOR036W ILV5P06168 395 aaKnown RBP2.45□□□□□ -2.02
PEP12YOR036W PDE2P06776 526 aa2.45□□□□□ -2.02
PEP12YOR036W YAR066WP0CX18 203 aa2.45□□□□□ -2.02
PEP12YOR036W YHR214WP0CX19 203 aa2.45□□□□□ -2.02
PEP12YOR036W RAD57P25301 460 aa2.45□□□□□ -2.02
PEP12YOR036W YCR100CP25606 316 aa2.45□□□□□ -2.02
PEP12YOR036W CRM1P30822 1084 aaKnown RBP2.45□□□□□ -2.02
PEP12YOR036W RPS0AP32905 252 aaKnown RBP2.45□□□□□ -2.02
PEP12YOR036W FRE2P36033 711 aa2.45□□□□□ -2.02
PEP12YOR036W YCR041WP37265 110 aa2.45□□□□□ -2.02
PEP12YOR036W RIM2P38127 377 aa2.45□□□□□ -2.02
PEP12YOR036W NAS2P40555 220 aa2.45□□□□□ -2.02
PEP12YOR036W EPL1P43572 832 aa2.45□□□□□ -2.02
PEP12YOR036W IKS1P47042 667 aa2.45□□□□□ -2.02
PEP12YOR036W YNR048WP53740 393 aa2.45□□□□□ -2.02
PEP12YOR036W ERP1Q05359 219 aaKnown RBP2.45□□□□□ -2.02
PEP12YOR036W SNT309Q06091 175 aaPredicted RBP2.45□□□□□ -2.02
PEP12YOR036W YLL056CQ12177 298 aa2.45□□□□□ -2.02
PEP12YOR036W ORT1Q12375 292 aa2.45□□□□□ -2.02
PEP12YOR036W RMD5Q12508 421 aa2.45□□□□□ -2.02
PEP12YOR036W CYB2P00175 591 aa2.44□□□□□ -2.02
PEP12YOR036W IMA3P0CW40 589 aa2.44□□□□□ -2.02
PEP12YOR036W IMA4P0CW41 589 aa2.44□□□□□ -2.02
PEP12YOR036W MTF1P14908 341 aaKnown RBP2.44□□□□□ -2.02
PEP12YOR036W RNA14P25298 677 aaKnown RBP2.44□□□□□ -2.02
PEP12YOR036W LSB5P25369 354 aa2.44□□□□□ -2.02
PEP12YOR036W YCR022CP25620 114 aa2.44□□□□□ -2.02
PEP12YOR036W CPR3P25719 182 aa2.44□□□□□ -2.02
PEP12YOR036W FAA1P30624 700 aaKnown RBP2.44□□□□□ -2.02
PEP12YOR036W TRS65P32893 560 aa2.44□□□□□ -2.02
PEP12YOR036W PTR2P32901 601 aa2.44□□□□□ -2.02
PEP12YOR036W RSM22P36056 628 aa2.44□□□□□ -2.02
PEP12YOR036W LYS1P38998 373 aaRIP-Chip data2.44□□□□□ -2.02not detected
PEP12YOR036W PCF11P39081 626 aaPredicted RBP2.44□□□□□ -2.02
PEP12YOR036W SHO1P40073 367 aa2.44□□□□□ -2.02
PEP12YOR036W ALG8P40351 577 aa2.44□□□□□ -2.02
PEP12YOR036W RRT5P43607 289 aa2.44□□□□□ -2.02
PEP12YOR036W ASN2P49090 572 aaKnown RBP2.44□□□□□ -2.02
PEP12YOR036W MRP51Q02950 344 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms