RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YDR341CQ05506 607 aaKnown RBP3.45□□□□□ -1.86
TRM112YNR046W HCR1Q05775 265 aaKnown RBP3.45□□□□□ -1.86
TRM112YNR046W COX3P00420 269 aa3.44□□□□□ -1.86
TRM112YNR046W ATR1P13090 542 aa3.44□□□□□ -1.86
TRM112YNR046W ALG1P16661 449 aa3.44□□□□□ -1.86
TRM112YNR046W RAD57P25301 460 aa3.44□□□□□ -1.86
TRM112YNR046W CTR86P25355 563 aa3.44□□□□□ -1.86
TRM112YNR046W MSP1P28737 362 aa3.44□□□□□ -1.86
TRM112YNR046W NIP1P32497 812 aaKnown RBP3.44□□□□□ -1.86
TRM112YNR046W GLC7P32598 312 aaKnown RBP3.44□□□□□ -1.86
TRM112YNR046W ANP1P32629 500 aa3.44□□□□□ -1.86
TRM112YNR046W MRPL4P36517 319 aa3.44□□□□□ -1.86
TRM112YNR046W PFF1P38244 976 aa3.44□□□□□ -1.86
TRM112YNR046W PCA1P38360 1216 aa3.44□□□□□ -1.86
TRM112YNR046W RRP4P38792 359 aaKnown RBP3.44□□□□□ -1.86
TRM112YNR046W YAL037WP39728 267 aa3.44□□□□□ -1.86
TRM112YNR046W HAT2P39984 401 aa3.44□□□□□ -1.86
TRM112YNR046W GAT2P40209 560 aa3.44□□□□□ -1.86
TRM112YNR046W YPS6P40583 537 aa3.44□□□□□ -1.86
TRM112YNR046W BTN2P53286 410 aa3.44□□□□□ -1.86
TRM112YNR046W FRE4P53746 719 aa3.44□□□□□ -1.86
TRM112YNR046W BET5Q03630 159 aa3.44□□□□□ -1.86
TRM112YNR046W ERP1Q05359 219 aaKnown RBP3.44□□□□□ -1.86
TRM112YNR046W NDL1Q06568 189 aa3.44□□□□□ -1.86
TRM112YNR046W NSE1Q07913 336 aa3.44□□□□□ -1.86
TRM112YNR046W DAP1Q12091 152 aa3.44□□□□□ -1.86
TRM112YNR046W NFI1Q12216 726 aa3.44□□□□□ -1.86
TRM112YNR046W PKH2Q12236 1081 aaKnown RBP3.44□□□□□ -1.86
TRM112YNR046W ORT1Q12375 292 aa3.44□□□□□ -1.86
TRM112YNR046W ICT1Q12385 394 aa3.44□□□□□ -1.86
TRM112YNR046W RPL20AP0CX23 172 aaKnown RBP3.43□□□□□ -1.86
TRM112YNR046W RPL20BP0CX24 172 aaPredicted RBP3.43□□□□□ -1.86
TRM112YNR046W PHO84P25297 587 aaKnown RBP3.43□□□□□ -1.86
TRM112YNR046W YCR022CP25620 114 aa3.43□□□□□ -1.86
TRM112YNR046W SEC1P30619 724 aaKnown RBP3.43□□□□□ -1.86
TRM112YNR046W CYS4P32582 507 aaKnown RBP3.43□□□□□ -1.86
TRM112YNR046W TMT1P32643 299 aa3.43□□□□□ -1.86
TRM112YNR046W PMU1P36069 295 aa3.43□□□□□ -1.86
TRM112YNR046W MTC4P38335 694 aaKnown RBP3.43□□□□□ -1.86
TRM112YNR046W POP6P53218 158 aa3.43□□□□□ -1.86
TRM112YNR046W YNR048WP53740 393 aa3.43□□□□□ -1.86
TRM112YNR046W MRP51Q02950 344 aa3.43□□□□□ -1.86
TRM112YNR046W YDR541CQ03049 344 aa3.43□□□□□ -1.86
TRM112YNR046W PIR3Q03180 325 aa3.43□□□□□ -1.86
TRM112YNR046W RSN1Q03516 953 aa3.43□□□□□ -1.86
TRM112YNR046W YFH1Q07540 174 aa3.43□□□□□ -1.86
TRM112YNR046W SKI7Q08491 747 aaPredicted RBP3.43□□□□□ -1.86
TRM112YNR046W TIM18Q08749 192 aa3.43□□□□□ -1.86
TRM112YNR046W YPL199CQ08954 240 aa3.43□□□□□ -1.86
TRM112YNR046W ATG34Q12292 412 aa3.43□□□□□ -1.86
TRM112YNR046W TEF1P02994 458 aaKnown RBP3.42□□□□□ -1.86
TRM112YNR046W RPL15AP05748 204 aaKnown RBP3.42□□□□□ -1.86
TRM112YNR046W CDC21P06785 304 aa3.42□□□□□ -1.86
TRM112YNR046W MRS3P10566 314 aa3.42□□□□□ -1.86
TRM112YNR046W LSB5P25369 354 aa3.42□□□□□ -1.86
TRM112YNR046W KRR1P25586 316 aaPredicted RBP3.42□□□□□ -1.86
TRM112YNR046W PHO91P27514 894 aa3.42□□□□□ -1.86
TRM112YNR046W TIP1P27654 210 aaPredicted RBP3.42□□□□□ -1.86
TRM112YNR046W RTT107P38850 1070 aa3.42□□□□□ -1.86
TRM112YNR046W MLH1P38920 769 aa3.42□□□□□ -1.86
TRM112YNR046W STN1P38960 494 aa3.42□□□□□ -1.86
TRM112YNR046W AVT4P50944 713 aa3.42□□□□□ -1.86
TRM112YNR046W CAF40P53829 373 aa3.42□□□□□ -1.86
TRM112YNR046W GPI15P53961 229 aa3.42□□□□□ -1.86
TRM112YNR046W MMT1Q03218 510 aa3.42□□□□□ -1.86
TRM112YNR046W URH1Q04179 340 aa3.42□□□□□ -1.86
TRM112YNR046W YDR286CQ05530 114 aa3.42□□□□□ -1.86
TRM112YNR046W CUE5Q08412 411 aaKnown RBP3.42□□□□□ -1.86
TRM112YNR046W PGC1Q08959 321 aa3.42□□□□□ -1.86
TRM112YNR046W YPR022CQ12139 1133 aa3.42□□□□□ -1.86
TRM112YNR046W SET6Q12529 373 aa3.42□□□□□ -1.86
TRM112YNR046W TFB5Q3E7C1 72 aaPredicted RBP3.42□□□□□ -1.86
TRM112YNR046W SRN2Q99176 213 aa3.42□□□□□ -1.86
TRM112YNR046W TPM1P17536 199 aaKnown RBP3.41□□□□□ -1.86
TRM112YNR046W KAP104P38217 918 aaKnown RBP3.41□□□□□ -1.86
TRM112YNR046W YSW1P38280 609 aa3.41□□□□□ -1.86
TRM112YNR046W MDM31P38880 579 aa3.41□□□□□ -1.86
TRM112YNR046W MST28P39552 234 aa3.41□□□□□ -1.86
TRM112YNR046W YER079WP40052 210 aaKnown RBP3.41□□□□□ -1.86
TRM112YNR046W GCD10P41814 478 aa3.41□□□□□ -1.86
TRM112YNR046W YFR016CP43597 1233 aaKnown RBP3.41□□□□□ -1.86
TRM112YNR046W ASN2P49090 572 aaKnown RBP3.41□□□□□ -1.86
TRM112YNR046W TOF1P53840 1238 aa3.41□□□□□ -1.86
TRM112YNR046W CRZ1P53968 678 aa3.41□□□□□ -1.86
TRM112YNR046W AYT1Q12226 474 aa3.41□□□□□ -1.86
TRM112YNR046W DST1P07273 309 aa3.4□□□□□ -1.87
TRM112YNR046W CHS1P08004 1131 aa3.4□□□□□ -1.87
TRM112YNR046W SAM1P10659 382 aaKnown RBP3.4□□□□□ -1.87
TRM112YNR046W VMA2P16140 517 aaKnown RBP3.4□□□□□ -1.87
TRM112YNR046W SAM2P19358 384 aaKnown RBP3.4□□□□□ -1.87
TRM112YNR046W PUT3P25502 979 aaPredicted RBP3.4□□□□□ -1.87
TRM112YNR046W PRO3P32263 286 aaKnown RBP3.4□□□□□ -1.87
TRM112YNR046W SMI1P32566 505 aa3.4□□□□□ -1.87
TRM112YNR046W NRP1P32770 719 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
TRM112YNR046W YBR056WP38081 501 aa3.4□□□□□ -1.87
TRM112YNR046W INM1P38710 295 aa3.4□□□□□ -1.87
TRM112YNR046W RPH1P39956 796 aa3.4□□□□□ -1.87
TRM112YNR046W RPR2P40571 144 aa3.4□□□□□ -1.87
TRM112YNR046W PAC11P40960 533 aa3.4□□□□□ -1.87
TRM112YNR046W LAM5P43560 674 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms