RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	HXT3	P32466	567 aa	Known RBP	2.28	□□□□□ -2.04
PKR1	YMR123W	MNS1	P32906	549 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	OTU2	P38747	307 aa	Known RBP	2.28	□□□□□ -2.04
PKR1	YMR123W	YHR054C	P38780	354 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	LYS1	P38998	373 aa	RIP-Chip data	2.28	□□□□□ -2.04	not detected
PKR1	YMR123W	SAS2	P40963	338 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	FRE4	P53746	719 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	CWC25	P53854	179 aa	Known RBP	2.28	□□□□□ -2.04
PKR1	YMR123W	PEX25	Q02969	394 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	SYF1	Q04048	859 aa	Predicted RBP	2.28	□□□□□ -2.04
PKR1	YMR123W	VTA1	Q06263	330 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	RTP1	Q12751	981 aa		2.28	□□□□□ -2.04
PKR1	YMR123W	CDC25	P04821	1589 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	GEA2	P39993	1459 aa	Known RBP	2.27	□□□□□ -2.05
PKR1	YMR123W	YPK9	Q12697	1472 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	TEF1	P02994	458 aa	Known RBP	2.27	□□□□□ -2.05
PKR1	YMR123W	NFT1	P0CE68	1218 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	SLY1	P22213	666 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	PPH22	P23595	377 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	ROX1	P25042	368 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	LSB5	P25369	354 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	KAR9	P32526	644 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	MUD1	P32605	298 aa	Known RBP	2.27	□□□□□ -2.05
PKR1	YMR123W	KKQ8	P36004	724 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	VHC1	P38329	1120 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	RFC3	P38629	340 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	ESL1	P40456	1118 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	YJR011C	P47086	261 aa	Predicted RBP	2.27	□□□□□ -2.05
PKR1	YMR123W	YIF1	P53845	314 aa	Known RBP	2.27	□□□□□ -2.05
PKR1	YMR123W	TSA2	Q04120	196 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	SNX3	Q08826	162 aa	Known RBP	2.27	□□□□□ -2.05
PKR1	YMR123W	ORT1	Q12375	292 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	RKR1	Q04781	1562 aa		2.27	□□□□□ -2.05
PKR1	YMR123W	RPO31	P04051	1460 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	MET17	P06106	444 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	CKA1	P15790	372 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	POP5	P28005	173 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	SIN4	P32259	974 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	FMS1	P50264	508 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	RPA49	Q01080	415 aa	Predicted RBP	2.26	□□□□□ -2.05
PKR1	YMR123W	IRC25	Q07951	179 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	SKI7	Q08491	747 aa	Predicted RBP	2.26	□□□□□ -2.05
PKR1	YMR123W	RMD5	Q12508	421 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	ESP1	Q03018	1630 aa		2.26	□□□□□ -2.05
PKR1	YMR123W	MMS1	Q06211	1407 aa		2.25	□□□□□ -2.05
PKR1	YMR123W	RPA190	P10964	1664 aa	Known RBP	2.25	□□□□□ -2.05
PKR1	YMR123W	CYC3	P06182	269 aa		2.25	□□□□□ -2.05
PKR1	YMR123W	RPL3	P14126	387 aa	Known RBP	2.25	□□□□□ -2.05
PKR1	YMR123W	CLC1	P17891	233 aa		2.25	□□□□□ -2.05
PKR1	YMR123W	CTR86	P25355	563 aa		2.25	□□□□□ -2.05
PKR1	YMR123W	KRE2	P27809	442 aa		2.25	□□□□□ -2.05
PKR1	YMR123W	DLD2	P46681	530 aa	Known RBP	2.25	□□□□□ -2.05
PKR1	YMR123W	MNP1	P53163	194 aa	Predicted RBP	2.25	□□□□□ -2.05
PKR1	YMR123W	PAN1	P32521	1480 aa		2.25	□□□□□ -2.05
PKR1	YMR123W	ESC1	Q03661	1658 aa	Known RBP	2.25	□□□□□ -2.05
PKR1	YMR123W	HCS1	P34243	683 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	ARA1	P38115	344 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	PCF11	P39081	626 aa	Predicted RBP	2.24	□□□□□ -2.05
PKR1	YMR123W	SSU1	P41930	458 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	HMS2	P47175	358 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	HAL1	Q01766	294 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	BET5	Q03630	159 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	MDM30	Q05930	598 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	SIL1	Q08199	421 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	REX4	Q08237	289 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	RKM1	Q08961	583 aa	Predicted RBP	2.24	□□□□□ -2.05
PKR1	YMR123W	HSP42	Q12329	375 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	TRM732	Q03496	1420 aa		2.24	□□□□□ -2.05
PKR1	YMR123W	DRS2	P39524	1355 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	ILV5	P06168	395 aa	Known RBP	2.23	□□□□□ -2.05
PKR1	YMR123W	PCL1	P24867	279 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	SNT1	P25357	1226 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	GEX1	P25596	615 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	RML2	P32611	393 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	UTH1	P36135	365 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	MRP21	P38175	177 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	GAB1	P41733	394 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	BRO1	P48582	844 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	MRPL19	P53875	158 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	TAF12	Q03761	539 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	RRP45	Q05636	305 aa	Known RBP	2.23	□□□□□ -2.05
PKR1	YMR123W	RTN2	Q12443	393 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	BNI1	P41832	1953 aa		2.23	□□□□□ -2.05
PKR1	YMR123W	VPS15	P22219	1454 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	NUP159	P40477	1460 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	MMS22	Q06164	1454 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
PKR1	YMR123W	SMY1	P32364	656 aa	Known RBP	2.22	□□□□□ -2.05
PKR1	YMR123W	NUP2	P32499	720 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	MRPL10	P36520	322 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	YAL037W	P39728	267 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	JLP2	P40206	208 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	RPS0B	P46654	252 aa	Known RBP	2.22	□□□□□ -2.05
PKR1	YMR123W	AZR1	P50080	613 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	RHO5	P53879	331 aa	Known RBP	2.22	□□□□□ -2.05
PKR1	YMR123W	GPI15	P53961	229 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	PLP2	Q12017	286 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	VAM3	Q12241	283 aa		2.22	□□□□□ -2.05
PKR1	YMR123W	TOP2	P06786	1428 aa	Known RBP	2.22	□□□□□ -2.05
PKR1	YMR123W	IRC20	Q06554	1556 aa		2.22	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms