RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C AIM10P39965 576 aaKnown RBP2.5□□□□□ -2.01
UBX4YMR067C SAS2P40963 338 aa2.5□□□□□ -2.01
UBX4YMR067C YJR011CP47086 261 aaPredicted RBP2.5□□□□□ -2.01
UBX4YMR067C YIF1P53845 314 aaKnown RBP2.5□□□□□ -2.01
UBX4YMR067C APJ1P53940 528 aa2.5□□□□□ -2.01
UBX4YMR067C TIM10P87108 93 aa2.5□□□□□ -2.01
UBX4YMR067C ORT1Q12375 292 aa2.5□□□□□ -2.01
UBX4YMR067C FAB1P34756 2278 aa2.5□□□□□ -2.01
UBX4YMR067C ARG3P05150 338 aa2.49□□□□□ -2.01
UBX4YMR067C NPL6P32832 435 aa2.49□□□□□ -2.01
UBX4YMR067C RFC3P38629 340 aa2.49□□□□□ -2.01
UBX4YMR067C MDE1P47095 244 aa2.49□□□□□ -2.01
UBX4YMR067C HMS2P47175 358 aa2.49□□□□□ -2.01
UBX4YMR067C FMS1P50264 508 aa2.49□□□□□ -2.01
UBX4YMR067C RHO5P53879 331 aaKnown RBP2.49□□□□□ -2.01
UBX4YMR067C BET5Q03630 159 aa2.49□□□□□ -2.01
UBX4YMR067C PLP2Q12017 286 aa2.49□□□□□ -2.01
UBX4YMR067C HSP42Q12329 375 aa2.49□□□□□ -2.01
UBX4YMR067C SNU66Q12420 587 aaPredicted RBP2.49□□□□□ -2.01
UBX4YMR067C GRX6Q12438 231 aa2.49□□□□□ -2.01
UBX4YMR067C CLC1P17891 233 aa2.48□□□□□ -2.01
UBX4YMR067C CTR86P25355 563 aa2.48□□□□□ -2.01
UBX4YMR067C SIN4P32259 974 aa2.48□□□□□ -2.01
UBX4YMR067C HXT3P32466 567 aaKnown RBP2.48□□□□□ -2.01
UBX4YMR067C ARA1P38115 344 aa2.48□□□□□ -2.01
UBX4YMR067C SMF1P38925 575 aa2.48□□□□□ -2.01
UBX4YMR067C SSU1P41930 458 aa2.48□□□□□ -2.01
UBX4YMR067C YJR085CP47131 105 aaKnown RBP2.48□□□□□ -2.01
UBX4YMR067C AZR1P50080 613 aa2.48□□□□□ -2.01
UBX4YMR067C TAF12Q03761 539 aa2.48□□□□□ -2.01
UBX4YMR067C JID1Q12350 301 aa2.48□□□□□ -2.01
UBX4YMR067C MRP7P12687 371 aa2.47□□□□□ -2.01
UBX4YMR067C PPH22P23595 377 aa2.47□□□□□ -2.01
UBX4YMR067C KRE2P27809 442 aa2.47□□□□□ -2.01
UBX4YMR067C JLP2P40206 208 aa2.47□□□□□ -2.01
UBX4YMR067C MNP1P53163 194 aaPredicted RBP2.47□□□□□ -2.01
UBX4YMR067C MTQ1P53944 314 aa2.47□□□□□ -2.01
UBX4YMR067C RNY1Q02933 434 aaKnown RBP2.47□□□□□ -2.01
UBX4YMR067C BCH1Q05029 724 aa2.47□□□□□ -2.01
UBX4YMR067C NDE2Q07500 545 aa2.47□□□□□ -2.01
UBX4YMR067C MED1Q12321 566 aa2.47□□□□□ -2.01
UBX4YMR067C YRM1Q12340 786 aa2.47□□□□□ -2.01
UBX4YMR067C YBL111CQ3E7Y5 667 aa2.47□□□□□ -2.01
UBX4YMR067C CCH1P50077 2039 aa2.47□□□□□ -2.01
UBX4YMR067C ILV5P06168 395 aaKnown RBP2.46□□□□□ -2.02
UBX4YMR067C SPO7P18410 259 aa2.46□□□□□ -2.02
UBX4YMR067C DFG10P40526 253 aa2.46□□□□□ -2.02
UBX4YMR067C IRC6P43615 237 aa2.46□□□□□ -2.02
UBX4YMR067C SFH5P47008 294 aa2.46□□□□□ -2.02
UBX4YMR067C GPI15P53961 229 aa2.46□□□□□ -2.02
UBX4YMR067C RKM1Q08961 583 aaPredicted RBP2.46□□□□□ -2.02
UBX4YMR067C RRI2Q12348 645 aa2.46□□□□□ -2.02
UBX4YMR067C RPL3P14126 387 aaKnown RBP2.45□□□□□ -2.02
UBX4YMR067C RAD57P25301 460 aa2.45□□□□□ -2.02
UBX4YMR067C CSE2P33308 149 aa2.45□□□□□ -2.02
UBX4YMR067C DLD2P46681 530 aaKnown RBP2.45□□□□□ -2.02
UBX4YMR067C RRP45Q05636 305 aaKnown RBP2.45□□□□□ -2.02
UBX4YMR067C IZH2Q12442 317 aa2.45□□□□□ -2.02
UBX4YMR067C SCEIP03882 235 aa2.44□□□□□ -2.02
UBX4YMR067C NAM2P11325 894 aa2.44□□□□□ -2.02
UBX4YMR067C RPB5P20434 215 aa2.44□□□□□ -2.02
UBX4YMR067C CLN1P20437 546 aa2.44□□□□□ -2.02
UBX4YMR067C ROX1P25042 368 aa2.44□□□□□ -2.02
UBX4YMR067C PRR1P28708 518 aa2.44□□□□□ -2.02
UBX4YMR067C SMY1P32364 656 aaKnown RBP2.44□□□□□ -2.02
UBX4YMR067C RRP1P35178 278 aaPredicted RBP2.44□□□□□ -2.02
UBX4YMR067C APE3P37302 537 aaKnown RBP2.44□□□□□ -2.02
UBX4YMR067C YHR131CP38835 850 aa2.44□□□□□ -2.02
UBX4YMR067C YAL037WP39728 267 aa2.44□□□□□ -2.02
UBX4YMR067C RPA49Q01080 415 aaPredicted RBP2.44□□□□□ -2.02
UBX4YMR067C VHS1Q03785 461 aa2.44□□□□□ -2.02
UBX4YMR067C MDM30Q05930 598 aa2.44□□□□□ -2.02
UBX4YMR067C CKA1P15790 372 aa2.43□□□□□ -2.02
UBX4YMR067C SPO12P17123 173 aa2.43□□□□□ -2.02
UBX4YMR067C AAT2P23542 418 aaKnown RBP2.43□□□□□ -2.02
UBX4YMR067C RHB1P25378 209 aa2.43□□□□□ -2.02
UBX4YMR067C RML2P32611 393 aa2.43□□□□□ -2.02
UBX4YMR067C SPT10P35208 640 aa2.43□□□□□ -2.02
UBX4YMR067C RTC2P38279 296 aa2.43□□□□□ -2.02
UBX4YMR067C MIG3P39943 394 aa2.43□□□□□ -2.02
UBX4YMR067C RPS0BP46654 252 aaKnown RBP2.43□□□□□ -2.02
UBX4YMR067C CMS1Q07897 291 aaKnown RBP2.43□□□□□ -2.02
UBX4YMR067C SIL1Q08199 421 aa2.43□□□□□ -2.02
UBX4YMR067C RAX1Q08760 435 aa2.43□□□□□ -2.02
UBX4YMR067C SRL2Q12020 392 aa2.43□□□□□ -2.02
UBX4YMR067C VAM3Q12241 283 aa2.43□□□□□ -2.02
UBX4YMR067C TPT1Q12272 230 aaKnown RBP2.43□□□□□ -2.02
UBX4YMR067C GEX1P25596 615 aa2.42□□□□□ -2.02
UBX4YMR067C BEM1P29366 551 aa2.42□□□□□ -2.02
UBX4YMR067C HIR2P32480 875 aa2.42□□□□□ -2.02
UBX4YMR067C MRPS9P38120 278 aa2.42□□□□□ -2.02
UBX4YMR067C NTC20P38302 140 aaPredicted RBP2.42□□□□□ -2.02
UBX4YMR067C COX14P39103 70 aa2.42□□□□□ -2.02
UBX4YMR067C YIL029CP40538 142 aa2.42□□□□□ -2.02
UBX4YMR067C COS5P47187 383 aa2.42□□□□□ -2.02
UBX4YMR067C ADA2Q02336 434 aa2.42□□□□□ -2.02
UBX4YMR067C OAZ1Q02803 292 aa2.42□□□□□ -2.02
UBX4YMR067C GIP3Q03016 1276 aa2.42□□□□□ -2.02
UBX4YMR067C ECM11Q04110 302 aa2.42□□□□□ -2.02
UBX4YMR067C RIF2Q06208 395 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms