RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C LYS1P38998 373 aaRIP-Chip data3.61□□□□□ -1.83not detected
PML39YML107C OST1P41543 476 aaKnown RBP3.61□□□□□ -1.83
PML39YML107C YPI1P43587 155 aa3.61□□□□□ -1.83
PML39YML107C YGL242CP53066 181 aa3.61□□□□□ -1.83
PML39YML107C YGR250CP53316 781 aaKnown RBP3.61□□□□□ -1.83
PML39YML107C PBA1Q05778 276 aa3.61□□□□□ -1.83
PML39YML107C SGT1Q08446 395 aa3.61□□□□□ -1.83
PML39YML107C ISA2Q12425 185 aa3.61□□□□□ -1.83
PML39YML107C YER078W-AQ3E7A2 54 aa3.61□□□□□ -1.83
PML39YML107C SIN3P22579 1536 aa3.6□□□□□ -1.83
PML39YML107C NUM1Q00402 2748 aa3.6□□□□□ -1.83
PML39YML107C TEF1P02994 458 aaKnown RBP3.6□□□□□ -1.83
PML39YML107C SPT15P13393 240 aaKnown RBP3.6□□□□□ -1.83
PML39YML107C URA4P20051 364 aa3.6□□□□□ -1.83
PML39YML107C CPR4P25334 318 aa3.6□□□□□ -1.83
PML39YML107C RPC53P25441 422 aa3.6□□□□□ -1.83
PML39YML107C ADK2P26364 225 aa3.6□□□□□ -1.83
PML39YML107C BRF1P29056 596 aa3.6□□□□□ -1.83
PML39YML107C PAD1P33751 242 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
PML39YML107C MPE1P35728 441 aaKnown RBP3.6□□□□□ -1.83
PML39YML107C YBR139WP38109 508 aa3.6□□□□□ -1.83
PML39YML107C NCA3P46955 337 aa3.6□□□□□ -1.83
PML39YML107C BNI5P53890 448 aaKnown RBP3.6□□□□□ -1.83
PML39YML107C RMT2Q03305 412 aa3.6□□□□□ -1.83
PML39YML107C YMR130WQ04223 302 aa3.6□□□□□ -1.83
PML39YML107C ERB1Q04660 807 aaKnown RBP3.6□□□□□ -1.83
PML39YML107C TLG2Q08144 397 aa3.6□□□□□ -1.83
PML39YML107C DIS3Q08162 1001 aaKnown RBP3.6□□□□□ -1.83
PML39YML107C YOR387CQ08910 206 aa3.6□□□□□ -1.83
PML39YML107C SEC63P14906 663 aa3.59□□□□□ -1.83
PML39YML107C SDH3P33421 198 aa3.59□□□□□ -1.83
PML39YML107C MIX23P38162 196 aa3.59□□□□□ -1.83
PML39YML107C MTC6P38849 526 aa3.59□□□□□ -1.83
PML39YML107C YNR048WP53740 393 aa3.59□□□□□ -1.83
PML39YML107C BET5Q03630 159 aa3.59□□□□□ -1.83
PML39YML107C VPS54Q12071 889 aa3.59□□□□□ -1.83
PML39YML107C RRP12Q12754 1228 aaKnown RBP3.59□□□□□ -1.83
PML39YML107C RAD61Q99359 647 aa3.59□□□□□ -1.83
PML39YML107C PDR15Q04182 1529 aaKnown RBP3.59□□□□□ -1.84
PML39YML107C CLN1P20437 546 aa3.58□□□□□ -1.84
PML39YML107C SLY1P22213 666 aa3.58□□□□□ -1.84
PML39YML107C CLB1P24868 471 aa3.58□□□□□ -1.84
PML39YML107C SOR1P35497 357 aaKnown RBP3.58□□□□□ -1.84
PML39YML107C PIM1P36775 1133 aa3.58□□□□□ -1.84
PML39YML107C APE3P37302 537 aaKnown RBP3.58□□□□□ -1.84
PML39YML107C RFC3P38629 340 aa3.58□□□□□ -1.84
PML39YML107C PTH1P38876 190 aaKnown RBP3.58□□□□□ -1.84
PML39YML107C CAK1P43568 368 aaPredicted RBP3.58□□□□□ -1.84
PML39YML107C MDG1P53885 366 aa3.58□□□□□ -1.84
PML39YML107C HOT1Q03213 719 aa3.58□□□□□ -1.84
PML39YML107C SMA2Q04658 369 aa3.58□□□□□ -1.84
PML39YML107C MDM30Q05930 598 aa3.58□□□□□ -1.84
PML39YML107C TSR1Q07381 788 aaKnown RBP3.58□□□□□ -1.84
PML39YML107C SOR2Q07786 357 aa3.58□□□□□ -1.84
PML39YML107C MED2Q12124 431 aa3.58□□□□□ -1.84
PML39YML107C ISN1Q99312 450 aa3.58□□□□□ -1.84
PML39YML107C SCEIP03882 235 aa3.57□□□□□ -1.84
PML39YML107C LSB5P25369 354 aa3.57□□□□□ -1.84
PML39YML107C RRN10P38204 145 aa3.57□□□□□ -1.84
PML39YML107C ZIM17P42844 174 aa3.57□□□□□ -1.84
PML39YML107C SPG5P42933 373 aa3.57□□□□□ -1.84
PML39YML107C TOF1P53840 1238 aa3.57□□□□□ -1.84
PML39YML107C ELP3Q02908 557 aaKnown RBP3.57□□□□□ -1.84
PML39YML107C GIP3Q03016 1276 aa3.57□□□□□ -1.84
PML39YML107C YMR181CQ03231 154 aa3.57□□□□□ -1.84
PML39YML107C PPM1Q04081 328 aa3.57□□□□□ -1.84
PML39YML107C DCS1Q06151 350 aa3.57□□□□□ -1.84
PML39YML107C SNX3Q08826 162 aaKnown RBP3.57□□□□□ -1.84
PML39YML107C RKM1Q08961 583 aaPredicted RBP3.57□□□□□ -1.84
PML39YML107C HOM3P10869 527 aa3.56□□□□□ -1.84
PML39YML107C NAM9P27929 486 aa3.56□□□□□ -1.84
PML39YML107C SMY1P32364 656 aaKnown RBP3.56□□□□□ -1.84
PML39YML107C KKQ8P36004 724 aa3.56□□□□□ -1.84
PML39YML107C FAA2P39518 744 aa3.56□□□□□ -1.84
PML39YML107C PHB2P50085 310 aa3.56□□□□□ -1.84
PML39YML107C RSN1Q03516 953 aa3.56□□□□□ -1.84
PML39YML107C ACL4Q03771 387 aa3.56□□□□□ -1.84
PML39YML107C YDR131CQ03899 556 aa3.56□□□□□ -1.84
PML39YML107C ORT1Q12375 292 aa3.56□□□□□ -1.84
PML39YML107C TY1B-AO13527 1196 aaKnown RBP3.55□□□□□ -1.84
PML39YML107C SNT1P25357 1226 aa3.55□□□□□ -1.84
PML39YML107C ERV1P27882 189 aa3.55□□□□□ -1.84
PML39YML107C URA7P28274 579 aaKnown RBP3.55□□□□□ -1.84
PML39YML107C ITR1P30605 584 aa3.55□□□□□ -1.84
PML39YML107C PRM5P40476 318 aa3.55□□□□□ -1.84
PML39YML107C PHO86P46956 311 aa3.55□□□□□ -1.84
PML39YML107C SKI7Q08491 747 aaPredicted RBP3.55□□□□□ -1.84
PML39YML107C SPT6P23615 1451 aaKnown RBP3.54□□□□□ -1.84
PML39YML107C CTR86P25355 563 aa3.54□□□□□ -1.84
PML39YML107C ARO2P28777 376 aaKnown RBP3.54□□□□□ -1.84
PML39YML107C MUD1P32605 298 aaKnown RBP3.54□□□□□ -1.84
PML39YML107C PXA2P34230 853 aa3.54□□□□□ -1.84
PML39YML107C YBR056WP38081 501 aa3.54□□□□□ -1.84
PML39YML107C SLM4P38247 162 aa3.54□□□□□ -1.84
PML39YML107C RRT2P38332 387 aa3.54□□□□□ -1.84
PML39YML107C SRP72P38688 640 aaKnown RBP3.54□□□□□ -1.84
PML39YML107C PCF11P39081 626 aaPredicted RBP3.54□□□□□ -1.84
PML39YML107C BTN2P53286 410 aa3.54□□□□□ -1.84
PML39YML107C OCA2P53949 197 aa3.54□□□□□ -1.84
PML39YML107C GPI15P53961 229 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms