RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W VHC1P38329 1120 aa2.27□□□□□ -2.05
SPE1YKL184W LSM5P40089 93 aaKnown RBP2.27□□□□□ -2.05
SPE1YKL184W FRE4P53746 719 aa2.27□□□□□ -2.05
SPE1YKL184W RSN1Q03516 953 aa2.27□□□□□ -2.05
SPE1YKL184W TAP42Q04372 366 aa2.27□□□□□ -2.05
SPE1YKL184W RQC1Q05468 723 aaKnown RBP2.27□□□□□ -2.05
SPE1YKL184W SNX3Q08826 162 aaKnown RBP2.27□□□□□ -2.05
SPE1YKL184W GPH1P06738 902 aaKnown RBP2.26□□□□□ -2.05
SPE1YKL184W SLY1P22213 666 aa2.26□□□□□ -2.05
SPE1YKL184W SNT1P25357 1226 aa2.26□□□□□ -2.05
SPE1YKL184W MUD1P32605 298 aaKnown RBP2.26□□□□□ -2.05
SPE1YKL184W VMA8P32610 256 aaKnown RBP2.26□□□□□ -2.05
SPE1YKL184W NFU1P32860 256 aa2.26□□□□□ -2.05
SPE1YKL184W NIP100P33420 868 aa2.26□□□□□ -2.05
SPE1YKL184W HCS1P34243 683 aa2.26□□□□□ -2.05
SPE1YKL184W YHR054CP38780 354 aa2.26□□□□□ -2.05
SPE1YKL184W LYS1P38998 373 aaRIP-Chip data2.26□□□□□ -2.05 RIP-Chip
SPE1YKL184W YGR250CP53316 781 aaKnown RBP2.26□□□□□ -2.05
SPE1YKL184W YNR048WP53740 393 aa2.26□□□□□ -2.05
SPE1YKL184W HXT11P54862 567 aa2.26□□□□□ -2.05
SPE1YKL184W SIL1Q08199 421 aa2.26□□□□□ -2.05
SPE1YKL184W SGT1Q08446 395 aa2.26□□□□□ -2.05
SPE1YKL184W SMC6Q12749 1114 aa2.26□□□□□ -2.05
SPE1YKL184W PDX1P16451 410 aa2.25□□□□□ -2.05
SPE1YKL184W HXT3P32466 567 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W TFB1P32776 642 aa2.25□□□□□ -2.05
SPE1YKL184W NPL6P32832 435 aa2.25□□□□□ -2.05
SPE1YKL184W KKQ8P36004 724 aa2.25□□□□□ -2.05
SPE1YKL184W APE3P37302 537 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W SRP72P38688 640 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W CCT2P39076 527 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W DLD2P46681 530 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W RSC1P53236 928 aa2.25□□□□□ -2.05
SPE1YKL184W RPA49Q01080 415 aaPredicted RBP2.25□□□□□ -2.05
SPE1YKL184W HAL1Q01766 294 aa2.25□□□□□ -2.05
SPE1YKL184W RMT2Q03305 412 aa2.25□□□□□ -2.05
SPE1YKL184W AIM32Q04689 311 aa2.25□□□□□ -2.05
SPE1YKL184W VTA1Q06263 330 aa2.25□□□□□ -2.05
SPE1YKL184W IRC25Q07951 179 aa2.25□□□□□ -2.05
SPE1YKL184W AFI1Q99222 893 aa2.25□□□□□ -2.05
SPE1YKL184W YLR278CQ05854 1341 aa2.25□□□□□ -2.05
SPE1YKL184W SOD1P00445 154 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W SPO7P18410 259 aa2.25□□□□□ -2.05
SPE1YKL184W YCR051WP25631 222 aa2.25□□□□□ -2.05
SPE1YKL184W MRPL10P36520 322 aa2.25□□□□□ -2.05
SPE1YKL184W MSG5P38590 489 aa2.25□□□□□ -2.05
SPE1YKL184W BNI5P53890 448 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W ARX1Q03862 593 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W ERB1Q04660 807 aaKnown RBP2.25□□□□□ -2.05
SPE1YKL184W HSP42Q12329 375 aa2.25□□□□□ -2.05
SPE1YKL184W TRP1P00912 224 aa2.24□□□□□ -2.05
SPE1YKL184W RPS8AP0CX39 200 aaKnown RBP2.24□□□□□ -2.05
SPE1YKL184W RPS8BP0CX40 200 aaKnown RBP2.24□□□□□ -2.05
SPE1YKL184W HOM3P10869 527 aa2.24□□□□□ -2.05
SPE1YKL184W POP5P28005 173 aa2.24□□□□□ -2.05
SPE1YKL184W UTH1P36135 365 aa2.24□□□□□ -2.05
SPE1YKL184W ARA1P38115 344 aa2.24□□□□□ -2.05
SPE1YKL184W ZIM17P42844 174 aa2.24□□□□□ -2.05
SPE1YKL184W HMS2P47175 358 aa2.24□□□□□ -2.05
SPE1YKL184W FMS1P50264 508 aa2.24□□□□□ -2.05
SPE1YKL184W MTM1P53320 366 aa2.24□□□□□ -2.05
SPE1YKL184W BET5Q03630 159 aa2.24□□□□□ -2.05
SPE1YKL184W ROY1Q04847 553 aa2.24□□□□□ -2.05
SPE1YKL184W NFT1P0CE68 1218 aa2.23□□□□□ -2.05
SPE1YKL184W CLC1P17891 233 aa2.23□□□□□ -2.05
SPE1YKL184W CLN1P20437 546 aa2.23□□□□□ -2.05
SPE1YKL184W PCL1P24867 279 aa2.23□□□□□ -2.05
SPE1YKL184W CLB1P24868 471 aa2.23□□□□□ -2.05
SPE1YKL184W LSB5P25369 354 aa2.23□□□□□ -2.05
SPE1YKL184W ADK2P26364 225 aa2.23□□□□□ -2.05
SPE1YKL184W NTC20P38302 140 aaPredicted RBP2.23□□□□□ -2.05
SPE1YKL184W YJR011CP47086 261 aaPredicted RBP2.23□□□□□ -2.05
SPE1YKL184W YGL138CP53122 345 aa2.23□□□□□ -2.05
SPE1YKL184W KTR5P53966 522 aaPredicted RBP2.23□□□□□ -2.05
SPE1YKL184W GYL1Q04322 720 aa2.23□□□□□ -2.05
SPE1YKL184W RRP45Q05636 305 aaKnown RBP2.23□□□□□ -2.05
SPE1YKL184W RRD2Q12461 358 aa2.23□□□□□ -2.05
SPE1YKL184W RIP1P08067 215 aa2.22□□□□□ -2.05
SPE1YKL184W ERV1P27882 189 aa2.22□□□□□ -2.05
SPE1YKL184W ITR1P30605 584 aa2.22□□□□□ -2.05
SPE1YKL184W RML2P32611 393 aa2.22□□□□□ -2.05
SPE1YKL184W YME2P32843 850 aa2.22□□□□□ -2.05
SPE1YKL184W MID2P36027 376 aa2.22□□□□□ -2.05
SPE1YKL184W SAS2P40963 338 aa2.22□□□□□ -2.05
SPE1YKL184W ADA2Q02336 434 aa2.22□□□□□ -2.05
SPE1YKL184W KAP120Q02932 1032 aa2.22□□□□□ -2.05
SPE1YKL184W YDR131CQ03899 556 aa2.22□□□□□ -2.05
SPE1YKL184W FDH1Q08911 376 aa2.22□□□□□ -2.05
SPE1YKL184W VPS54Q12071 889 aa2.22□□□□□ -2.05
SPE1YKL184W YRM1Q12340 786 aa2.22□□□□□ -2.05
SPE1YKL184W NAM2P11325 894 aa2.21□□□□□ -2.06
SPE1YKL184W MMS4P38257 691 aa2.21□□□□□ -2.06
SPE1YKL184W PCF11P39081 626 aaPredicted RBP2.21□□□□□ -2.06
SPE1YKL184W VMA13P41807 478 aaKnown RBP2.21□□□□□ -2.06
SPE1YKL184W MTQ1P53944 314 aa2.21□□□□□ -2.06
SPE1YKL184W NDE2Q07500 545 aa2.21□□□□□ -2.06
SPE1YKL184W URA4P20051 364 aa2.2□□□□□ -2.06
SPE1YKL184W URA7P28274 579 aaKnown RBP2.2□□□□□ -2.06
SPE1YKL184W BEM1P29366 551 aa2.2□□□□□ -2.06
SPE1YKL184W PEX5P35056 612 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms