RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C PFA4Q12006 378 aa1.66□□□□□ -2.14
HIR3YJR140C ALG1P16661 449 aa1.66□□□□□ -2.14
HIR3YJR140C UBA1P22515 1024 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C ELO2P25358 347 aa1.66□□□□□ -2.14
HIR3YJR140C FAA1P30624 700 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C OSH3P38713 996 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C RTT107P38850 1070 aa1.66□□□□□ -2.14
HIR3YJR140C PET100P38958 111 aa1.66□□□□□ -2.14
HIR3YJR140C YIL060WP40519 144 aa1.66□□□□□ -2.14
HIR3YJR140C SAS2P40963 338 aa1.66□□□□□ -2.14
HIR3YJR140C SLI1P53304 468 aa1.66□□□□□ -2.14
HIR3YJR140C RHO5P53879 331 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C YMR181CQ03231 154 aa1.66□□□□□ -2.14
HIR3YJR140C EKI1Q03764 534 aa1.66□□□□□ -2.14
HIR3YJR140C NUP53Q03790 475 aa1.66□□□□□ -2.14
HIR3YJR140C ERP1Q05359 219 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C LOT6Q07923 191 aa1.66□□□□□ -2.14
HIR3YJR140C CUE5Q08412 411 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C TPT1Q12272 230 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C MEX67Q99257 599 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C RAD52P06778 471 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C SAR1P20606 190 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C BUB3P26449 341 aa1.66□□□□□ -2.14
HIR3YJR140C PDR3P33200 976 aa1.66□□□□□ -2.14
HIR3YJR140C RFC3P38629 340 aa1.66□□□□□ -2.14
HIR3YJR140C FAD1P38913 306 aa1.66□□□□□ -2.14
HIR3YJR140C MLH1P38920 769 aa1.66□□□□□ -2.14
HIR3YJR140C NUP100Q02629 959 aa1.66□□□□□ -2.14
HIR3YJR140C PHO92Q06390 306 aa1.66□□□□□ -2.14
HIR3YJR140C RRP9Q06506 573 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C PEX27Q08580 376 aa1.66□□□□□ -2.14
HIR3YJR140C SPC110P32380 944 aa1.66□□□□□ -2.14
HIR3YJR140C RAD5P32849 1169 aaPredicted RBP1.66□□□□□ -2.14
HIR3YJR140C KKQ8P36004 724 aa1.66□□□□□ -2.14
HIR3YJR140C SIF2P38262 535 aa1.66□□□□□ -2.14
HIR3YJR140C PCA1P38360 1216 aa1.66□□□□□ -2.14
HIR3YJR140C STN1P38960 494 aa1.66□□□□□ -2.14
HIR3YJR140C EFM4P40516 257 aa1.66□□□□□ -2.14
HIR3YJR140C RPS10BP46784 105 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C PHO86P46956 311 aa1.66□□□□□ -2.14
HIR3YJR140C HMS2P47175 358 aa1.66□□□□□ -2.14
HIR3YJR140C YIP1P53039 248 aa1.66□□□□□ -2.14
HIR3YJR140C CUE3P53137 624 aaKnown RBP1.66□□□□□ -2.14
HIR3YJR140C YNL146WP53906 100 aa1.66□□□□□ -2.14
HIR3YJR140C IZH1Q03419 316 aa1.66□□□□□ -2.14
HIR3YJR140C SYO1Q07395 620 aa1.66□□□□□ -2.14
HIR3YJR140C YER145C-AA0A023PYF4 145 aa1.65□□□□□ -2.14
HIR3YJR140C THI2P38141 450 aa1.65□□□□□ -2.14
HIR3YJR140C SPP381P38282 291 aaPredicted RBP1.65□□□□□ -2.14
HIR3YJR140C SMC2P38989 1170 aaKnown RBP1.65□□□□□ -2.14
HIR3YJR140C SEC9P40357 651 aa1.65□□□□□ -2.14
HIR3YJR140C MAM33P40513 266 aa1.65□□□□□ -2.14
HIR3YJR140C SCD6P45978 349 aaKnown RBP RIP-Chip data1.65□□□□□ -2.14 RIP-Chip
HIR3YJR140C SFH5P47008 294 aa1.65□□□□□ -2.14
HIR3YJR140C YNR048WP53740 393 aa1.65□□□□□ -2.14
HIR3YJR140C SMA2Q04658 369 aa1.65□□□□□ -2.14
HIR3YJR140C FMP42Q04991 504 aa1.65□□□□□ -2.14
HIR3YJR140C TIM18Q08749 192 aa1.65□□□□□ -2.14
HIR3YJR140C FRE7Q12333 620 aa1.65□□□□□ -2.14
HIR3YJR140C HMS1Q12398 434 aa1.65□□□□□ -2.14
HIR3YJR140C RAD61Q99359 647 aa1.65□□□□□ -2.14
HIR3YJR140C PAB1P04147 577 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
HIR3YJR140C MAS2P11914 482 aa1.65□□□□□ -2.15
HIR3YJR140C YCR100CP25606 316 aa1.65□□□□□ -2.15
HIR3YJR140C TIP1P27654 210 aaPredicted RBP1.65□□□□□ -2.15
HIR3YJR140C ATO2P32907 282 aa1.65□□□□□ -2.15
HIR3YJR140C YCR041WP37265 110 aa1.65□□□□□ -2.15
HIR3YJR140C YDR089WP38966 869 aa1.65□□□□□ -2.15
HIR3YJR140C PCL7P40186 285 aa1.65□□□□□ -2.15
HIR3YJR140C YMR134WP40207 237 aa1.65□□□□□ -2.15
HIR3YJR140C SAD1P43589 448 aa1.65□□□□□ -2.15
HIR3YJR140C TRS85P46944 698 aa1.65□□□□□ -2.15
HIR3YJR140C POP6P53218 158 aa1.65□□□□□ -2.15
HIR3YJR140C STD1Q02794 444 aa1.65□□□□□ -2.15
HIR3YJR140C YDR387CQ04162 555 aa1.65□□□□□ -2.15
HIR3YJR140C MDM10P18409 493 aa1.65□□□□□ -2.15
HIR3YJR140C PTR2P32901 601 aa1.65□□□□□ -2.15
HIR3YJR140C ASC1P38011 319 aaKnown RBP1.65□□□□□ -2.15
HIR3YJR140C ARP1P38696 384 aa1.65□□□□□ -2.15
HIR3YJR140C RRF1P38771 230 aa1.65□□□□□ -2.15
HIR3YJR140C CCT2P39076 527 aaKnown RBP1.65□□□□□ -2.15
HIR3YJR140C YIF1P53845 314 aaKnown RBP1.65□□□□□ -2.15
HIR3YJR140C DIC1Q06143 298 aa1.65□□□□□ -2.15
HIR3YJR140C YPL199CQ08954 240 aa1.65□□□□□ -2.15
HIR3YJR140C RRD2Q12461 358 aa1.65□□□□□ -2.15
HIR3YJR140C ISN1Q99312 450 aa1.65□□□□□ -2.15
HIR3YJR140C CBP2P03874 630 aaPredicted RBP1.65□□□□□ -2.15
HIR3YJR140C ATP1P07251 545 aaKnown RBP1.65□□□□□ -2.15
HIR3YJR140C GRR1P24814 1151 aa1.65□□□□□ -2.15
HIR3YJR140C SOR1P35497 357 aaKnown RBP1.65□□□□□ -2.15
HIR3YJR140C YSW1P38280 609 aa1.65□□□□□ -2.15
HIR3YJR140C LEU5P38702 357 aa1.65□□□□□ -2.15
HIR3YJR140C PEX18P38855 283 aa1.65□□□□□ -2.15
HIR3YJR140C SSO2P39926 295 aa1.65□□□□□ -2.15
HIR3YJR140C ISC1P40015 477 aaKnown RBP1.65□□□□□ -2.15
HIR3YJR140C XBP1P40489 647 aa1.65□□□□□ -2.15
HIR3YJR140C SNL1P40548 159 aa1.65□□□□□ -2.15
HIR3YJR140C SPG5P42933 373 aa1.65□□□□□ -2.15
HIR3YJR140C YNR068CP53754 272 aa1.65□□□□□ -2.15
HIR3YJR140C GPI15P53961 229 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms